RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 CNNM3Q8NE01 707 aa13.6□□□□□ -0.23
PBX1-211ENST00000498497 ZSCAN16Q9H4T2 348 aaPredicted RBP13.6□□□□□ -0.23
PBX1-211ENST00000498497 CFDP1Q9UEE9 299 aaPredicted RBP13.6□□□□□ -0.23
PBX1-211ENST00000498497 MYBL1P10243 752 aa13.6□□□□□ -0.23
PBX1-211ENST00000498497 CCT5P48643 541 aa13.6□□□□□ -0.23
PBX1-211ENST00000498497 NECAB1Q8N987 351 aa13.6□□□□□ -0.23
PBX1-211ENST00000498497 PPP1R13BQ96KQ4 1090 aa13.6□□□□□ -0.23
PBX1-211ENST00000498497 CLIC6Q96NY7 704 aa13.6□□□□□ -0.23
PBX1-211ENST00000498497 AKAP2Q9Y2D5 859 aa13.6□□□□□ -0.23
PBX1-211ENST00000498497 IPO8O15397 1037 aaKnown RBP13.59□□□□□ -0.23
PBX1-211ENST00000498497 RPSAP08865 295 aaKnown RBP13.59□□□□□ -0.23
PBX1-211ENST00000498497 HSP90AA4PQ58FG1 418 aa13.59□□□□□ -0.23
PBX1-211ENST00000498497 TMC6Q7Z403 805 aa13.59□□□□□ -0.23
PBX1-211ENST00000498497 GCC1Q96CN9 775 aa13.59□□□□□ -0.23
PBX1-211ENST00000498497 EIF4E1BA6NMX2 242 aaKnown RBP13.59□□□□□ -0.23
PBX1-211ENST00000498497 KIF2AO00139 706 aaPredicted RBP13.59□□□□□ -0.23
PBX1-211ENST00000498497 TFRCP02786 760 aaKnown RBP13.59□□□□□ -0.23
PBX1-211ENST00000498497 GSCP56915 257 aaPredicted RBP13.59□□□□□ -0.23
PBX1-211ENST00000498497 PSMD2Q13200 908 aa13.59□□□□□ -0.23
PBX1-211ENST00000498497 EXOC4Q96A65 974 aa13.59□□□□□ -0.23
PBX1-211ENST00000498497 PARD6BQ9BYG5 372 aa13.59□□□□□ -0.23
PBX1-211ENST00000498497 SAMM50Q9Y512 469 aa13.59□□□□□ -0.23
PBX1-211ENST00000498497 EME2A4GXA9 379 aaPredicted RBP13.59□□□□□ -0.23
PBX1-211ENST00000498497 MYO1FO00160 1098 aa13.59□□□□□ -0.23
PBX1-211ENST00000498497 F13A1P00488 732 aa13.59□□□□□ -0.23
PBX1-211ENST00000498497 RDXP35241 583 aaKnown RBP13.59□□□□□ -0.23
PBX1-211ENST00000498497 C11orf57Q6ZUT1 292 aaPredicted RBP13.59□□□□□ -0.23
PBX1-211ENST00000498497 EHD4Q9H223 541 aa13.59□□□□□ -0.23
PBX1-211ENST00000498497 CCZ1BP86790 482 aa13.58□□□□□ -0.24
PBX1-211ENST00000498497 CCZ1P86791 482 aaPredicted RBP13.58□□□□□ -0.24
PBX1-211ENST00000498497 LONRF2Q1L5Z9 754 aa13.58□□□□□ -0.24
PBX1-211ENST00000498497 KRT24Q2M2I5 525 aa13.58□□□□□ -0.24
PBX1-211ENST00000498497 E4F1Q66K89 784 aaPredicted RBP13.58□□□□□ -0.24
PBX1-211ENST00000498497 LRRC31Q6UY01 552 aa13.58□□□□□ -0.24
PBX1-211ENST00000498497 RHOXF2BP0C7M4 288 aa13.58□□□□□ -0.24
PBX1-211ENST00000498497 SETQ01105 290 aaPredicted RBP13.58□□□□□ -0.24
PBX1-211ENST00000498497 MEX3CQ5U5Q3 659 aaKnown RBP13.58□□□□□ -0.24
PBX1-211ENST00000498497 TTC6Q86TZ1 520 aa13.58□□□□□ -0.24
PBX1-211ENST00000498497 CTCFLQ8NI51 663 aaPredicted RBP13.58□□□□□ -0.24
PBX1-211ENST00000498497 RHOXF2Q9BQY4 288 aa13.58□□□□□ -0.24
PBX1-211ENST00000498497 MRC2Q9UBG0 1479 aa13.58□□□□□ -0.24
PBX1-211ENST00000498497 FGD5Q6ZNL6 1462 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 NR1I2O75469 434 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 RNF20Q5VTR2 975 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 PLA2G4DQ86XP0 818 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 TCEANC2Q96MN5 208 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.57□□□□□ -0.24
PBX1-211ENST00000498497 TDRD9Q8NDG6 1382 aaKnown RBP13.57□□□□□ -0.24
PBX1-211ENST00000498497 ENO4A6NNW6 628 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 NF2P35240 595 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 NAA25Q14CX7 972 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 HSP90B2PQ58FF3 399 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 KCNV1Q6PIU1 500 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 CARD14Q9BXL6 1004 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 DAPK1P53355 1430 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 CDC25CP30307 473 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 NAP1L1P55209 391 aaKnown RBP13.57□□□□□ -0.24
PBX1-211ENST00000498497 SCRN1Q12765 414 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 RIN2Q8WYP3 895 aaPredicted RBP13.57□□□□□ -0.24
PBX1-211ENST00000498497 ZNF428Q96B54 188 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 CAPN7Q9Y6W3 813 aa13.57□□□□□ -0.24
PBX1-211ENST00000498497 LARGE1O95461 756 aa13.56□□□□□ -0.24
PBX1-211ENST00000498497 MCCP23508 829 aa13.56□□□□□ -0.24
PBX1-211ENST00000498497 CCNHP51946 323 aaPredicted RBP13.56□□□□□ -0.24
PBX1-211ENST00000498497 E2F5Q15329 346 aa13.56□□□□□ -0.24
PBX1-211ENST00000498497 FAM204AQ9H8W3 233 aa13.56□□□□□ -0.24
PBX1-211ENST00000498497 ABCC5O15440 1437 aa13.56□□□□□ -0.24
PBX1-211ENST00000498497 GJB2P29033 226 aa13.56□□□□□ -0.24
PBX1-211ENST00000498497 GCKP35557 465 aa13.56□□□□□ -0.24
PBX1-211ENST00000498497 NBPF20Q3BBV1 942 aa13.56□□□□□ -0.24
PBX1-211ENST00000498497 CPSF2Q9P2I0 782 aaKnown RBP13.56□□□□□ -0.24
PBX1-211ENST00000498497 ZBTB7BO15156 539 aaPredicted RBP13.55□□□□□ -0.24
PBX1-211ENST00000498497 FKBP15Q5T1M5 1219 aa13.55□□□□□ -0.24
PBX1-211ENST00000498497 COL17A1Q9UMD9 1497 aaPredicted RBP13.55□□□□□ -0.24
PBX1-211ENST00000498497 CCDC196A0A1B0GTZ2 297 aa13.55□□□□□ -0.24
PBX1-211ENST00000498497 BIN1O00499 593 aa13.55□□□□□ -0.24
PBX1-211ENST00000498497 GNAI3P08754 354 aa13.55□□□□□ -0.24
PBX1-211ENST00000498497 WDR63Q8IWG1 891 aa13.55□□□□□ -0.24
PBX1-211ENST00000498497 AOPEPQ8N6M6 819 aa13.55□□□□□ -0.24
PBX1-211ENST00000498497 ZBTB10Q96DT7 871 aa13.55□□□□□ -0.24
PBX1-211ENST00000498497 FUT8Q9BYC5 575 aa13.55□□□□□ -0.24
PBX1-211ENST00000498497 GNG11P61952 73 aa13.55□□□□□ -0.24
PBX1-211ENST00000498497 PPP2R3AQ06190 1150 aa13.55□□□□□ -0.24
PBX1-211ENST00000498497 DDX11Q96FC9 970 aa13.55□□□□□ -0.24
PBX1-211ENST00000498497 CLNS1AP54105 237 aaKnown RBP13.54□□□□□ -0.24
PBX1-211ENST00000498497 STK3Q13188 491 aa13.54□□□□□ -0.24
PBX1-211ENST00000498497 KARSQ15046 597 aaKnown RBP13.54□□□□□ -0.24
PBX1-211ENST00000498497 TSPYL6Q8N831 410 aa13.54□□□□□ -0.24
PBX1-211ENST00000498497 MIEF2Q96C03 454 aa13.54□□□□□ -0.24
PBX1-211ENST00000498497 BORCS6Q96GS4 357 aa13.54□□□□□ -0.24
PBX1-211ENST00000498497 ARHGAP31Q2M1Z3 1444 aa13.54□□□□□ -0.24
PBX1-211ENST00000498497 ELF1P32519 619 aa13.54□□□□□ -0.24
PBX1-211ENST00000498497 SSR1P43307 286 aaKnown RBP13.54□□□□□ -0.24
PBX1-211ENST00000498497 EFCAB13Q8IY85 973 aa13.54□□□□□ -0.24
PBX1-211ENST00000498497 CEP89Q96ST8 783 aa13.54□□□□□ -0.24
PBX1-211ENST00000498497 UTP14AQ9BVJ6 771 aaKnown RBP13.54□□□□□ -0.24
PBX1-211ENST00000498497 MAGI3Q5TCQ9 1506 aa13.54□□□□□ -0.24
PBX1-211ENST00000498497 TADA3O75528 432 aa13.53□□□□□ -0.24
PBX1-211ENST00000498497 SFPQP23246 707 aaKnown RBP eCLIP13.53□□□□□ -0.24
PBX1-211ENST00000498497 SUGP1Q8IWZ8 645 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms