RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 GRM8O00222 908 aa22.14■■□□□ 1.13
CHRNA4-206ENST00000498043 SMARCA5O60264 1052 aaPredicted RBP22.14■■□□□ 1.13
CHRNA4-206ENST00000498043 TTLL7Q6ZT98 887 aa22.14■■□□□ 1.13
CHRNA4-206ENST00000498043 NPM2Q86SE8 214 aaKnown RBP22.14■■□□□ 1.13
CHRNA4-206ENST00000498043 PLBD2Q8NHP8 589 aa22.14■■□□□ 1.13
CHRNA4-206ENST00000498043 SLC4A9Q96Q91 983 aa22.14■■□□□ 1.13
CHRNA4-206ENST00000498043 PPP1R42Q7Z4L9 355 aa22.13■■□□□ 1.13
CHRNA4-206ENST00000498043 ZNF330Q9Y3S2 320 aaPredicted RBP22.13■■□□□ 1.13
CHRNA4-206ENST00000498043 TEX13AQ9BXU3 409 aaPredicted RBP22.13■■□□□ 1.13
CHRNA4-206ENST00000498043 SRGAP3O43295 1099 aa22.11■■□□□ 1.13
CHRNA4-206ENST00000498043 STARD3NLO95772 234 aa22.11■■□□□ 1.13
CHRNA4-206ENST00000498043 SSH3Q8TE77 659 aa22.11■■□□□ 1.13
CHRNA4-206ENST00000498043 AFF2P51816 1311 aa22.11■■□□□ 1.13
CHRNA4-206ENST00000498043 ATP5J2-PTCD1G3V325 749 aa22.11■■□□□ 1.13
CHRNA4-206ENST00000498043 GCKRQ14397 625 aa22.11■■□□□ 1.13
CHRNA4-206ENST00000498043 UTYO14607 1347 aa22.11■■□□□ 1.13
CHRNA4-206ENST00000498043 ZBTB3Q9H5J0 574 aa22.1■■□□□ 1.13
CHRNA4-206ENST00000498043 POLA2Q14181 598 aa22.1■■□□□ 1.13
CHRNA4-206ENST00000498043 C16orf71Q8IYS4 520 aaPredicted RBP22.1■■□□□ 1.13
CHRNA4-206ENST00000498043 SUCLG2Q96I99 432 aa22.1■■□□□ 1.13
CHRNA4-206ENST00000498043 IBTKQ9P2D0 1353 aaPredicted RBP22.1■■□□□ 1.13
CHRNA4-206ENST00000498043 ANP32AP39687 249 aaKnown RBP22.08■■□□□ 1.13
CHRNA4-206ENST00000498043 OTUD7AQ8TE49 926 aaPredicted RBP22.08■■□□□ 1.13
CHRNA4-206ENST00000498043 CYP19A1P11511 503 aaPredicted RBP22.08■■□□□ 1.12
CHRNA4-206ENST00000498043 KCNQ2O43526 872 aa22.07■■□□□ 1.12
CHRNA4-206ENST00000498043 PLEKHM2Q8IWE5 1019 aa22.07■■□□□ 1.12
CHRNA4-206ENST00000498043 HDAC5Q9UQL6 1122 aa22.07■■□□□ 1.12
CHRNA4-206ENST00000498043 KAZALD1Q96I82 304 aa22.07■■□□□ 1.12
CHRNA4-206ENST00000498043 LRRCC1Q9C099 1032 aa22.07■■□□□ 1.12
CHRNA4-206ENST00000498043 BICC1Q9H694 974 aaKnown RBP22.07■■□□□ 1.12
CHRNA4-206ENST00000498043 MTX1Q13505 466 aa22.06■■□□□ 1.12
CHRNA4-206ENST00000498043 BMP2KLQ5H9B9 411 aa22.06■■□□□ 1.12
CHRNA4-206ENST00000498043 JARID2Q92833 1246 aaPredicted RBP22.06■■□□□ 1.12
CHRNA4-206ENST00000498043 PALLDQ8WX93 1383 aa22.06■■□□□ 1.12
CHRNA4-206ENST00000498043 SURF6O75683 361 aaKnown RBP22.05■■□□□ 1.12
CHRNA4-206ENST00000498043 SEC24BO95487 1268 aa22.05■■□□□ 1.12
CHRNA4-206ENST00000498043 ZBTB1Q9Y2K1 713 aa22.05■■□□□ 1.12
CHRNA4-206ENST00000498043 UBE3BQ7Z3V4 1068 aa22.05■■□□□ 1.12
CHRNA4-206ENST00000498043 GJD4Q96KN9 370 aaPredicted RBP22.05■■□□□ 1.12
CHRNA4-206ENST00000498043 ATRNO75882 1429 aa22.05■■□□□ 1.12
CHRNA4-206ENST00000498043 CICQ96RK0 1608 aaPredicted RBP22.04■■□□□ 1.12
CHRNA4-206ENST00000498043 KIF6Q6ZMV9 814 aa22.03■■□□□ 1.12
CHRNA4-206ENST00000498043 A0A087WZG4 1122 aa22.03■■□□□ 1.12
CHRNA4-206ENST00000498043 ARXQ96QS3 562 aa22.03■■□□□ 1.12
CHRNA4-206ENST00000498043 LOC102724428A0A0B4J2F2 783 aa22.02■■□□□ 1.12
CHRNA4-206ENST00000498043 SIK1P57059 783 aa22.02■■□□□ 1.12
CHRNA4-206ENST00000498043 GSPT1P15170 499 aaKnown RBP22.02■■□□□ 1.11
CHRNA4-206ENST00000498043 ATP6V1AP38606 617 aa22.02■■□□□ 1.11
CHRNA4-206ENST00000498043 NHSQ6T4R5 1651 aa22.02■■□□□ 1.11
CHRNA4-206ENST00000498043 EPHA10Q5JZY3 1008 aa22.01■■□□□ 1.11
CHRNA4-206ENST00000498043 FAM182BQ5T319 152 aa22.01■■□□□ 1.11
CHRNA4-206ENST00000498043 CWC25Q9NXE8 425 aaPredicted RBP22.01■■□□□ 1.11
CHRNA4-206ENST00000498043 TTC22Q5TAA0 569 aa22■■□□□ 1.11
CHRNA4-206ENST00000498043 IL1RAPL2Q9NP60 686 aa22■■□□□ 1.11
CHRNA4-206ENST00000498043 TRPC5Q9UL62 973 aaPredicted RBP22■■□□□ 1.11
CHRNA4-206ENST00000498043 RREB1Q92766 1687 aa22■■□□□ 1.11
CHRNA4-206ENST00000498043 BTAF1O14981 1849 aa22■■□□□ 1.11
CHRNA4-206ENST00000498043 PA2G4Q9UQ80 394 aaKnown RBP22■■□□□ 1.11
CHRNA4-206ENST00000498043 COL5A3P25940 1745 aaPredicted RBP22■■□□□ 1.11
CHRNA4-206ENST00000498043 ANKRD36CQ5JPF3 1778 aa21.99■■□□□ 1.11
CHRNA4-206ENST00000498043 RAB11FIP3O75154 756 aa21.99■■□□□ 1.11
CHRNA4-206ENST00000498043 RTL5Q5HYW3 569 aaPredicted RBP21.99■■□□□ 1.11
CHRNA4-206ENST00000498043 MAP3K15Q6ZN16 1313 aa21.99■■□□□ 1.11
CHRNA4-206ENST00000498043 CASP7P55210 303 aa21.99■■□□□ 1.11
CHRNA4-206ENST00000498043 OS9Q13438 667 aaPredicted RBP21.99■■□□□ 1.11
CHRNA4-206ENST00000498043 ITPK1Q13572 414 aa21.99■■□□□ 1.11
CHRNA4-206ENST00000498043 SMARCC1Q92922 1105 aaPredicted RBP21.99■■□□□ 1.11
CHRNA4-206ENST00000498043 PTF1AQ7RTS3 328 aa21.98■■□□□ 1.11
CHRNA4-206ENST00000498043 RHPN1Q8TCX5 695 aa21.98■■□□□ 1.11
CHRNA4-206ENST00000498043 CRKLP46109 303 aaKnown RBP21.97■■□□□ 1.11
CHRNA4-206ENST00000498043 TSHZ3Q63HK5 1081 aa21.97■■□□□ 1.11
CHRNA4-206ENST00000498043 CCDC191Q8NCU4 936 aa21.97■■□□□ 1.11
CHRNA4-206ENST00000498043 KIF1BPQ96EK5 621 aa21.97■■□□□ 1.11
CHRNA4-206ENST00000498043 NOP58Q9Y2X3 529 aaKnown RBP21.97■■□□□ 1.11
CHRNA4-206ENST00000498043 SALL3Q9BXA9 1300 aa21.97■■□□□ 1.11
CHRNA4-206ENST00000498043 COL15A1P39059 1388 aa21.97■■□□□ 1.11
CHRNA4-206ENST00000498043 IL6STP40189 918 aaPredicted RBP21.97■■□□□ 1.11
CHRNA4-206ENST00000498043 PDE1AP54750 535 aa21.97■■□□□ 1.11
CHRNA4-206ENST00000498043 TCIRG1Q13488 830 aa21.97■■□□□ 1.11
CHRNA4-206ENST00000498043 HSP90AB4PQ58FF6 505 aa21.97■■□□□ 1.11
CHRNA4-206ENST00000498043 CCDC87Q9NVE4 849 aa21.97■■□□□ 1.11
CHRNA4-206ENST00000498043 ZNF831Q5JPB2 1677 aa21.96■■□□□ 1.11
CHRNA4-206ENST00000498043 MX1P20591 662 aa21.96■■□□□ 1.11
CHRNA4-206ENST00000498043 ISCA1Q9BUE6 129 aa21.96■■□□□ 1.11
CHRNA4-206ENST00000498043 MYH14Q7Z406 1995 aaKnown RBP21.96■■□□□ 1.11
CHRNA4-206ENST00000498043 TUBGCP6Q96RT7 1819 aa21.96■■□□□ 1.11
CHRNA4-206ENST00000498043 H7C1W4 665 aa21.95■■□□□ 1.11
CHRNA4-206ENST00000498043 HLFQ16534 295 aa21.95■■□□□ 1.11
CHRNA4-206ENST00000498043 INTS5Q6P9B9 1019 aaKnown RBP21.95■■□□□ 1.11
CHRNA4-206ENST00000498043 NUP98P52948 1817 aa21.95■■□□□ 1.1
CHRNA4-206ENST00000498043 SBF2Q86WG5 1849 aa21.94■■□□□ 1.1
CHRNA4-206ENST00000498043 MFAP1P55081 439 aaKnown RBP21.94■■□□□ 1.1
CHRNA4-206ENST00000498043 GIGYF2Q6Y7W6 1299 aaKnown RBP21.94■■□□□ 1.1
CHRNA4-206ENST00000498043 DZIP3Q86Y13 1208 aaKnown RBP21.94■■□□□ 1.1
CHRNA4-206ENST00000498043 SEPT12Q8IYM1 358 aa21.94■■□□□ 1.1
CHRNA4-206ENST00000498043 KLHDC4Q8TBB5 520 aa21.94■■□□□ 1.1
CHRNA4-206ENST00000498043 UPF2Q9HAU5 1272 aaKnown RBP21.94■■□□□ 1.1
CHRNA4-206ENST00000498043 RABL6Q3YEC7 729 aaPredicted RBP21.94■■□□□ 1.1
CHRNA4-206ENST00000498043 NUTM1Q86Y26 1132 aa21.94■■□□□ 1.1
CHRNA4-206ENST00000498043 SIL1Q9H173 461 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms