RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 FAM160A2Q8N612 972 aaPredicted RBP11.03□□□□□ -0.64
EPHA4-213ENST00000495693 PCDHGC3Q9UN70 934 aa11.03□□□□□ -0.64
EPHA4-213ENST00000495693 NALCNQ8IZF0 1738 aa11.03□□□□□ -0.64
EPHA4-213ENST00000495693 MAP2P11137 1827 aaKnown RBP11.02□□□□□ -0.64
EPHA4-213ENST00000495693 S1PR4O95977 384 aa11.02□□□□□ -0.65
EPHA4-213ENST00000495693 RIPK4P57078 832 aa11.02□□□□□ -0.65
EPHA4-213ENST00000495693 GUCA2AQ02747 115 aa11.02□□□□□ -0.65
EPHA4-213ENST00000495693 TUSC1Q2TAM9 212 aa11.02□□□□□ -0.65
EPHA4-213ENST00000495693 SLC26A8Q96RN1 970 aa11.02□□□□□ -0.65
EPHA4-213ENST00000495693 USB1Q9BQ65 265 aaKnown RBP11.02□□□□□ -0.65
EPHA4-213ENST00000495693 RSPH6AQ9H0K4 717 aa11.02□□□□□ -0.65
EPHA4-213ENST00000495693 SETD1BQ9UPS6 1966 aaKnown RBP11.02□□□□□ -0.65
EPHA4-213ENST00000495693 ACEP12821 1306 aa11.02□□□□□ -0.65
EPHA4-213ENST00000495693 KIF16BQ96L93 1317 aa11.02□□□□□ -0.65
EPHA4-213ENST00000495693 RNF223E7ERA6 249 aa11.01□□□□□ -0.65
EPHA4-213ENST00000495693 IPO8O15397 1037 aaKnown RBP11.01□□□□□ -0.65
EPHA4-213ENST00000495693 NDUFV2P19404 249 aa11.01□□□□□ -0.65
EPHA4-213ENST00000495693 RARSP54136 660 aaKnown RBP11.01□□□□□ -0.65
EPHA4-213ENST00000495693 NFE2L2Q16236 605 aa11.01□□□□□ -0.65
EPHA4-213ENST00000495693 MYSM1Q5VVJ2 828 aa11.01□□□□□ -0.65
EPHA4-213ENST00000495693 ANKLE1Q8NAG6 615 aa11.01□□□□□ -0.65
EPHA4-213ENST00000495693 PMFBP1Q8TBY8 1022 aa11.01□□□□□ -0.65
EPHA4-213ENST00000495693 PRR36Q9H6K5 1346 aa11.01□□□□□ -0.65
EPHA4-213ENST00000495693 USP54Q70EL1 1684 aa11.01□□□□□ -0.65
EPHA4-213ENST00000495693 PLIN1O60240 522 aa11□□□□□ -0.65
EPHA4-213ENST00000495693 IL13P35225 146 aa11□□□□□ -0.65
EPHA4-213ENST00000495693 ANP32AP39687 249 aaKnown RBP11□□□□□ -0.65
EPHA4-213ENST00000495693 GNAI1P63096 354 aa11□□□□□ -0.65
EPHA4-213ENST00000495693 ALDH1L2Q3SY69 923 aa11□□□□□ -0.65
EPHA4-213ENST00000495693 ZKSCAN2Q63HK3 967 aa11□□□□□ -0.65
EPHA4-213ENST00000495693 NME9Q86XW9 330 aa11□□□□□ -0.65
EPHA4-213ENST00000495693 FMN2Q9NZ56 1722 aa11□□□□□ -0.65
EPHA4-213ENST00000495693 SSH2Q76I76 1423 aa11□□□□□ -0.65
EPHA4-213ENST00000495693 PPM1GO15355 546 aaPredicted RBP10.99□□□□□ -0.65
EPHA4-213ENST00000495693 PRKAR2BP31323 418 aa10.99□□□□□ -0.65
EPHA4-213ENST00000495693 MMP16P51512 607 aa10.99□□□□□ -0.65
EPHA4-213ENST00000495693 BRPF1P55201 1214 aaPredicted RBP10.99□□□□□ -0.65
EPHA4-213ENST00000495693 RETREG3Q86VR2 466 aa10.99□□□□□ -0.65
EPHA4-213ENST00000495693 NGDNQ8NEJ9 315 aaKnown RBP10.99□□□□□ -0.65
EPHA4-213ENST00000495693 FAM117AQ9C073 453 aa10.99□□□□□ -0.65
EPHA4-213ENST00000495693 IFT57Q9NWB7 429 aa10.99□□□□□ -0.65
EPHA4-213ENST00000495693 RRP7AQ9Y3A4 280 aaKnown RBP10.99□□□□□ -0.65
EPHA4-213ENST00000495693 FLT4P35916 1363 aa10.99□□□□□ -0.65
EPHA4-213ENST00000495693 CHD2O14647 1828 aaKnown RBP10.98□□□□□ -0.65
EPHA4-213ENST00000495693 SPDYE5A6NIY4 337 aa10.98□□□□□ -0.65
EPHA4-213ENST00000495693 RIC3Q7Z5B4 369 aa10.98□□□□□ -0.65
EPHA4-213ENST00000495693 FTSJ3Q8IY81 847 aaKnown RBP10.98□□□□□ -0.65
EPHA4-213ENST00000495693 CLUAP1Q96AJ1 413 aa10.98□□□□□ -0.65
EPHA4-213ENST00000495693 KDM2BQ8NHM5 1336 aa10.98□□□□□ -0.65
EPHA4-213ENST00000495693 SBNO1A3KN83 1393 aa10.98□□□□□ -0.65
EPHA4-213ENST00000495693 ARHGEF10O15013 1369 aa10.98□□□□□ -0.65
EPHA4-213ENST00000495693 PRPF38BQ5VTL8 546 aaKnown RBP10.97□□□□□ -0.65
EPHA4-213ENST00000495693 ERICH6Q7L0X2 663 aa10.97□□□□□ -0.65
EPHA4-213ENST00000495693 V9GY48 417 aaPredicted RBP10.97□□□□□ -0.65
EPHA4-213ENST00000495693 RTL1A6NKG5 1358 aa10.97□□□□□ -0.65
EPHA4-213ENST00000495693 NPHP4O75161 1426 aaPredicted RBP10.96□□□□□ -0.65
EPHA4-213ENST00000495693 ADGRL3Q9HAR2 1447 aa10.96□□□□□ -0.65
EPHA4-213ENST00000495693 BCAR3O75815 825 aa10.96□□□□□ -0.65
EPHA4-213ENST00000495693 DXOO77932 396 aaKnown RBP10.96□□□□□ -0.65
EPHA4-213ENST00000495693 PRKCSHP14314 528 aaPredicted RBP10.96□□□□□ -0.65
EPHA4-213ENST00000495693 DDX19BQ9UMR2 479 aa10.96□□□□□ -0.65
EPHA4-213ENST00000495693 EMILIN1Q9Y6C2 1016 aa10.96□□□□□ -0.65
EPHA4-213ENST00000495693 NWD1Q149M9 1564 aa10.95□□□□□ -0.66
EPHA4-213ENST00000495693 KCNA6P17658 529 aa10.95□□□□□ -0.66
EPHA4-213ENST00000495693 MTMR2Q13614 643 aa10.95□□□□□ -0.66
EPHA4-213ENST00000495693 SH3D19Q5HYK7 790 aa10.95□□□□□ -0.66
EPHA4-213ENST00000495693 FRAT1Q92837 279 aaPredicted RBP10.95□□□□□ -0.66
EPHA4-213ENST00000495693 SMC4Q9NTJ3 1288 aa10.95□□□□□ -0.66
EPHA4-213ENST00000495693 C6orf229H3BNL8 230 aa10.94□□□□□ -0.66
EPHA4-213ENST00000495693 MVPQ14764 893 aaKnown RBP10.94□□□□□ -0.66
EPHA4-213ENST00000495693 C20orf194Q5TEA3 1177 aa10.94□□□□□ -0.66
EPHA4-213ENST00000495693 DZIP1LQ8IYY4 767 aaKnown RBP10.94□□□□□ -0.66
EPHA4-213ENST00000495693 ARHGAP45Q92619 1136 aa10.94□□□□□ -0.66
EPHA4-213ENST00000495693 SYMPKQ92797 1274 aaKnown RBP10.94□□□□□ -0.66
EPHA4-213ENST00000495693 RWDD1Q9H446 243 aaPredicted RBP10.94□□□□□ -0.66
EPHA4-213ENST00000495693 GOPCQ9HD26 462 aa10.94□□□□□ -0.66
EPHA4-213ENST00000495693 PRDM9Q9NQV7 894 aa10.94□□□□□ -0.66
EPHA4-213ENST00000495693 NCOA3Q9Y6Q9 1424 aa10.93□□□□□ -0.66
EPHA4-213ENST00000495693 CLK2P49760 499 aaKnown RBP10.93□□□□□ -0.66
EPHA4-213ENST00000495693 SKIV2LQ15477 1246 aaKnown RBP10.93□□□□□ -0.66
EPHA4-213ENST00000495693 DESI1Q6ICB0 168 aa10.93□□□□□ -0.66
EPHA4-213ENST00000495693 GAS2L2Q8NHY3 880 aa10.93□□□□□ -0.66
EPHA4-213ENST00000495693 CHMP4AQ9BY43 222 aa10.93□□□□□ -0.66
EPHA4-213ENST00000495693 ZBTB3Q9H5J0 574 aa10.93□□□□□ -0.66
EPHA4-213ENST00000495693 LIMD1Q9UGP4 676 aa10.93□□□□□ -0.66
EPHA4-213ENST00000495693 PCDHB15Q9Y5E8 787 aa10.93□□□□□ -0.66
EPHA4-213ENST00000495693 RGPD1P0DJD0 1748 aa10.92□□□□□ -0.66
EPHA4-213ENST00000495693 SOS1Q07889 1333 aaPredicted RBP10.92□□□□□ -0.66
EPHA4-213ENST00000495693 PPEF1O14829 653 aaPredicted RBP10.92□□□□□ -0.66
EPHA4-213ENST00000495693 HTATSF1O43719 755 aaKnown RBP10.92□□□□□ -0.66
EPHA4-213ENST00000495693 JUNDP17535 347 aa10.92□□□□□ -0.66
EPHA4-213ENST00000495693 AMPHP49418 695 aa10.92□□□□□ -0.66
EPHA4-213ENST00000495693 EXOSC9Q06265 439 aaKnown RBP10.92□□□□□ -0.66
EPHA4-213ENST00000495693 RRS1Q15050 365 aaKnown RBP10.92□□□□□ -0.66
EPHA4-213ENST00000495693 ATF7IPQ6VMQ6 1270 aa10.92□□□□□ -0.66
EPHA4-213ENST00000495693 KCNH5Q8NCM2 988 aa10.92□□□□□ -0.66
EPHA4-213ENST00000495693 KIF1AQ12756 1690 aa10.92□□□□□ -0.66
EPHA4-213ENST00000495693 HMOX1P09601 288 aa10.91□□□□□ -0.66
EPHA4-213ENST00000495693 EIF4A2Q14240 407 aaKnown RBP10.91□□□□□ -0.66
EPHA4-213ENST00000495693 PRKD2Q9BZL6 878 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms