RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 ROBO1Q9Y6N7 1651 aa13.21□□□□□ -0.29
PHACTR4-204ENST00000493669 PLBD2Q8NHP8 589 aa13.21□□□□□ -0.29
PHACTR4-204ENST00000493669 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
PHACTR4-204ENST00000493669 PLCH1Q4KWH8 1693 aa13.21□□□□□ -0.29
PHACTR4-204ENST00000493669 CLASRPQ8N2M8 674 aaKnown RBP13.21□□□□□ -0.29
PHACTR4-204ENST00000493669 IL27Q8NEV9 243 aa13.21□□□□□ -0.29
PHACTR4-204ENST00000493669 ESYT1Q9BSJ8 1104 aa13.21□□□□□ -0.29
PHACTR4-204ENST00000493669 K7ELQ4 463 aaPredicted RBP13.21□□□□□ -0.3
PHACTR4-204ENST00000493669 OS9Q13438 667 aaPredicted RBP13.21□□□□□ -0.3
PHACTR4-204ENST00000493669 CHMLP26374 656 aa13.2□□□□□ -0.3
PHACTR4-204ENST00000493669 PI4K2BQ8TCG2 481 aa13.2□□□□□ -0.3
PHACTR4-204ENST00000493669 KAZALD1Q96I82 304 aa13.2□□□□□ -0.3
PHACTR4-204ENST00000493669 MYD88Q99836 296 aa13.2□□□□□ -0.3
PHACTR4-204ENST00000493669 TRIM6-TRIM34B2RNG4 842 aa13.2□□□□□ -0.3
PHACTR4-204ENST00000493669 DDIT3P35638 169 aa13.2□□□□□ -0.3
PHACTR4-204ENST00000493669 GPATCH3Q96I76 525 aa13.2□□□□□ -0.3
PHACTR4-204ENST00000493669 BICC1Q9H694 974 aaKnown RBP13.2□□□□□ -0.3
PHACTR4-204ENST00000493669 DISP2A7MBM2 1401 aa13.2□□□□□ -0.3
PHACTR4-204ENST00000493669 LRP6O75581 1613 aa13.2□□□□□ -0.3
PHACTR4-204ENST00000493669 TOGARAM1Q9Y4F4 1720 aa13.19□□□□□ -0.3
PHACTR4-204ENST00000493669 FRAT2O75474 233 aaPredicted RBP13.19□□□□□ -0.3
PHACTR4-204ENST00000493669 GLRX3O76003 335 aaKnown RBP13.19□□□□□ -0.3
PHACTR4-204ENST00000493669 TSHZ3Q63HK5 1081 aa13.19□□□□□ -0.3
PHACTR4-204ENST00000493669 NUTM1Q86Y26 1132 aa13.19□□□□□ -0.3
PHACTR4-204ENST00000493669 AFDNP55196 1824 aaKnown RBP13.19□□□□□ -0.3
PHACTR4-204ENST00000493669 MCCP23508 829 aa13.19□□□□□ -0.3
PHACTR4-204ENST00000493669 DEKP35659 375 aaKnown RBP13.19□□□□□ -0.3
PHACTR4-204ENST00000493669 RILPL2Q969X0 211 aa13.19□□□□□ -0.3
PHACTR4-204ENST00000493669 CNTROBQ8N137 903 aa13.18□□□□□ -0.3
PHACTR4-204ENST00000493669 DDX54Q8TDD1 881 aaKnown RBP13.18□□□□□ -0.3
PHACTR4-204ENST00000493669 IL17RAQ96F46 866 aa13.18□□□□□ -0.3
PHACTR4-204ENST00000493669 BTG4Q9NY30 223 aa13.18□□□□□ -0.3
PHACTR4-204ENST00000493669 AK9Q5TCS8 1911 aa13.18□□□□□ -0.3
PHACTR4-204ENST00000493669 NUP188Q5SRE5 1749 aa13.18□□□□□ -0.3
PHACTR4-204ENST00000493669 ANAPC15P60006 121 aa13.18□□□□□ -0.3
PHACTR4-204ENST00000493669 G3BP1Q13283 466 aaKnown RBP eCLIP13.18□□□□□ -0.3
PHACTR4-204ENST00000493669 COL16A1Q07092 1604 aaPredicted RBP13.18□□□□□ -0.3
PHACTR4-204ENST00000493669 RABL6Q3YEC7 729 aaPredicted RBP13.17□□□□□ -0.3
PHACTR4-204ENST00000493669 VSIG10Q8N0Z9 540 aa13.17□□□□□ -0.3
PHACTR4-204ENST00000493669 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
PHACTR4-204ENST00000493669 LTBP4Q8N2S1 1624 aa13.17□□□□□ -0.3
PHACTR4-204ENST00000493669 ST18O60284 1047 aa13.17□□□□□ -0.3
PHACTR4-204ENST00000493669 ECHDC1Q9NTX5 307 aa13.17□□□□□ -0.3
PHACTR4-204ENST00000493669 TMOD3Q9NYL9 352 aa13.17□□□□□ -0.3
PHACTR4-204ENST00000493669 NBPF26B4DH59 902 aa13.16□□□□□ -0.3
PHACTR4-204ENST00000493669 NBPF14Q5TI25 921 aa13.16□□□□□ -0.3
PHACTR4-204ENST00000493669 NBPF10Q6P3W6 841 aaKnown RBP13.16□□□□□ -0.3
PHACTR4-204ENST00000493669 NBPF15Q8N660 670 aa13.16□□□□□ -0.3
PHACTR4-204ENST00000493669 WNK3Q9BYP7 1800 aa13.16□□□□□ -0.3
PHACTR4-204ENST00000493669 IFIT2P09913 472 aaKnown RBP13.16□□□□□ -0.3
PHACTR4-204ENST00000493669 UNC5CLQ8IV45 518 aa13.16□□□□□ -0.3
PHACTR4-204ENST00000493669 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
PHACTR4-204ENST00000493669 COPRSQ9NQ92 184 aa13.16□□□□□ -0.3
PHACTR4-204ENST00000493669 CD2BP2O95400 341 aaKnown RBP13.15□□□□□ -0.3
PHACTR4-204ENST00000493669 PA2G4Q9UQ80 394 aaKnown RBP13.15□□□□□ -0.3
PHACTR4-204ENST00000493669 HSP90AA1P07900 732 aaKnown RBP13.14□□□□□ -0.31
PHACTR4-204ENST00000493669 CASP7P55210 303 aa13.14□□□□□ -0.31
PHACTR4-204ENST00000493669 SPRYD3Q8NCJ5 442 aa13.14□□□□□ -0.31
PHACTR4-204ENST00000493669 SASH1O94885 1247 aa13.14□□□□□ -0.31
PHACTR4-204ENST00000493669 A0A087WZG4 1122 aa13.14□□□□□ -0.31
PHACTR4-204ENST00000493669 H7C1W4 665 aa13.14□□□□□ -0.31
PHACTR4-204ENST00000493669 MCM2P49736 904 aa13.14□□□□□ -0.31
PHACTR4-204ENST00000493669 CDCA7Q9BWT1 371 aaPredicted RBP13.14□□□□□ -0.31
PHACTR4-204ENST00000493669 PIP4K2AP48426 406 aaPredicted RBP13.13□□□□□ -0.31
PHACTR4-204ENST00000493669 AACSQ86V21 672 aa13.13□□□□□ -0.31
PHACTR4-204ENST00000493669 ANO2Q9NQ90 1003 aa13.13□□□□□ -0.31
PHACTR4-204ENST00000493669 SGSM2O43147 1006 aa13.13□□□□□ -0.31
PHACTR4-204ENST00000493669 RFX5P48382 616 aaPredicted RBP13.13□□□□□ -0.31
PHACTR4-204ENST00000493669 EPHA10Q5JZY3 1008 aa13.13□□□□□ -0.31
PHACTR4-204ENST00000493669 UBE3BQ7Z3V4 1068 aa13.13□□□□□ -0.31
PHACTR4-204ENST00000493669 CCDC191Q8NCU4 936 aa13.13□□□□□ -0.31
PHACTR4-204ENST00000493669 RUFY2Q8WXA3 655 aa13.13□□□□□ -0.31
PHACTR4-204ENST00000493669 CWC25Q9NXE8 425 aaPredicted RBP13.13□□□□□ -0.31
PHACTR4-204ENST00000493669 PTCD1O75127 700 aaKnown RBP13.12□□□□□ -0.31
PHACTR4-204ENST00000493669 EVI5LQ96CN4 794 aa13.12□□□□□ -0.31
PHACTR4-204ENST00000493669 ITGB4P16144 1822 aa13.12□□□□□ -0.31
PHACTR4-204ENST00000493669 TJP1Q07157 1748 aa13.12□□□□□ -0.31
PHACTR4-204ENST00000493669 HIP1O00291 1037 aa13.12□□□□□ -0.31
PHACTR4-204ENST00000493669 GSE1Q14687 1217 aa13.12□□□□□ -0.31
PHACTR4-204ENST00000493669 A1BGP04217 495 aa13.11□□□□□ -0.31
PHACTR4-204ENST00000493669 MCM4P33991 863 aa13.11□□□□□ -0.31
PHACTR4-204ENST00000493669 BCL9O00512 1426 aa13.11□□□□□ -0.31
PHACTR4-204ENST00000493669 ATP5J2-PTCD1G3V325 749 aa13.11□□□□□ -0.31
PHACTR4-204ENST00000493669 RAB3GAP1Q15042 981 aa13.11□□□□□ -0.31
PHACTR4-204ENST00000493669 TTLL7Q6ZT98 887 aa13.11□□□□□ -0.31
PHACTR4-204ENST00000493669 PIGBQ92521 554 aa13.11□□□□□ -0.31
PHACTR4-204ENST00000493669 RAD50Q92878 1312 aa13.11□□□□□ -0.31
PHACTR4-204ENST00000493669 PHLPP1O60346 1717 aa13.11□□□□□ -0.31
PHACTR4-204ENST00000493669 PTPN12Q05209 780 aaKnown RBP13.11□□□□□ -0.31
PHACTR4-204ENST00000493669 EAF2Q96CJ1 260 aaPredicted RBP13.11□□□□□ -0.31
PHACTR4-204ENST00000493669 CWC22Q9HCG8 908 aaKnown RBP13.11□□□□□ -0.31
PHACTR4-204ENST00000493669 THRAP3Q9Y2W1 955 aaKnown RBP13.11□□□□□ -0.31
PHACTR4-204ENST00000493669 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
PHACTR4-204ENST00000493669 STARD3NLO95772 234 aa13.1□□□□□ -0.31
PHACTR4-204ENST00000493669 HSPA4P34932 840 aa13.1□□□□□ -0.31
PHACTR4-204ENST00000493669 DDX11L8A8MPP1 907 aa13.1□□□□□ -0.31
PHACTR4-204ENST00000493669 EXOC5O00471 708 aa13.1□□□□□ -0.31
PHACTR4-204ENST00000493669 TRIM28Q13263 835 aaKnown RBP13.1□□□□□ -0.31
PHACTR4-204ENST00000493669 DIAPH3Q9NSV4 1193 aa13.1□□□□□ -0.31
PHACTR4-204ENST00000493669 ATG3Q9NT62 314 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms