RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 PLA2G4DQ86XP0 818 aa9.91□□□□□ -0.82
GBP3-208ENST00000493594 TRERF1Q96PN7 1200 aa9.91□□□□□ -0.82
GBP3-208ENST00000493594 NAP1L2Q9ULW6 460 aaPredicted RBP9.91□□□□□ -0.82
GBP3-208ENST00000493594 ABCA9Q8IUA7 1624 aa9.91□□□□□ -0.82
GBP3-208ENST00000493594 PTH1RQ03431 593 aa9.91□□□□□ -0.82
GBP3-208ENST00000493594 ST3GAL1Q11201 340 aa9.91□□□□□ -0.82
GBP3-208ENST00000493594 ELF2Q15723 593 aa9.91□□□□□ -0.82
GBP3-208ENST00000493594 PI4K2BQ8TCG2 481 aa9.91□□□□□ -0.82
GBP3-208ENST00000493594 TCEANC2Q96MN5 208 aa9.91□□□□□ -0.82
GBP3-208ENST00000493594 ASXL2Q76L83 1435 aa9.91□□□□□ -0.82
GBP3-208ENST00000493594 UHRF1BP1LA0JNW5 1464 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 COL9A3Q14050 684 aaPredicted RBP9.9□□□□□ -0.82
GBP3-208ENST00000493594 HSP90AB2PQ58FF8 381 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 FBXO38Q6PIJ6 1188 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 STAG3Q9UJ98 1225 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 CCDC66A2RUB6 948 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 NR1I2O75469 434 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 RBM6P78332 1123 aaKnown RBP9.9□□□□□ -0.82
GBP3-208ENST00000493594 PTPN14Q15678 1187 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 FILIP1Q7Z7B0 1213 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 LRRC8AQ8IWT6 810 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 CNTROBQ8N137 903 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 PLCD3Q8N3E9 789 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 ZNF397Q8NF99 534 aaPredicted RBP9.9□□□□□ -0.82
GBP3-208ENST00000493594 SYTL4Q96C24 671 aaPredicted RBP9.9□□□□□ -0.82
GBP3-208ENST00000493594 SPATA32Q96LK8 384 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 USP44Q9H0E7 712 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 CYP46A1Q9Y6A2 500 aa9.9□□□□□ -0.82
GBP3-208ENST00000493594 UBTFL1P0CB47 393 aaPredicted RBP9.89□□□□□ -0.83
GBP3-208ENST00000493594 PPP1R42Q7Z4L9 355 aa9.89□□□□□ -0.83
GBP3-208ENST00000493594 RHPN1Q8TCX5 695 aa9.89□□□□□ -0.83
GBP3-208ENST00000493594 TPCN1Q9ULQ1 816 aa9.89□□□□□ -0.83
GBP3-208ENST00000493594 CDK12Q9NYV4 1490 aaPredicted RBP9.89□□□□□ -0.83
GBP3-208ENST00000493594 SIGLEC1Q9BZZ2 1709 aa9.89□□□□□ -0.83
GBP3-208ENST00000493594 VPS53Q5VIR6 699 aa9.89□□□□□ -0.83
GBP3-208ENST00000493594 BICD2Q8TD16 824 aa9.89□□□□□ -0.83
GBP3-208ENST00000493594 TIGD1Q96MW7 591 aa9.89□□□□□ -0.83
GBP3-208ENST00000493594 A0A087WWV3 80 aa9.88□□□□□ -0.83
GBP3-208ENST00000493594 EPB41L2O43491 1005 aaKnown RBP9.88□□□□□ -0.83
GBP3-208ENST00000493594 RAPGEF3O95398 923 aa9.88□□□□□ -0.83
GBP3-208ENST00000493594 SKILP12757 684 aa9.88□□□□□ -0.83
GBP3-208ENST00000493594 STK3Q13188 491 aa9.88□□□□□ -0.83
GBP3-208ENST00000493594 FBXO31Q5XUX0 539 aaPredicted RBP9.88□□□□□ -0.83
GBP3-208ENST00000493594 SLC52A1Q9NWF4 448 aa9.88□□□□□ -0.83
GBP3-208ENST00000493594 USP16Q9Y5T5 823 aa9.88□□□□□ -0.83
GBP3-208ENST00000493594 SOS1Q07889 1333 aaPredicted RBP9.88□□□□□ -0.83
GBP3-208ENST00000493594 GOLGA6L19H0YKK7 550 aa9.88□□□□□ -0.83
GBP3-208ENST00000493594 SRGAP3O43295 1099 aa9.88□□□□□ -0.83
GBP3-208ENST00000493594 MTHFSDQ2M296 383 aaKnown RBP9.88□□□□□ -0.83
GBP3-208ENST00000493594 TDRD7Q8NHU6 1098 aaKnown RBP9.88□□□□□ -0.83
GBP3-208ENST00000493594 ZSCAN31Q96LW9 406 aaPredicted RBP9.88□□□□□ -0.83
GBP3-208ENST00000493594 CEBPZQ03701 1054 aaKnown RBP9.87□□□□□ -0.83
GBP3-208ENST00000493594 LARP1Q6PKG0 1096 aaKnown RBP9.87□□□□□ -0.83
GBP3-208ENST00000493594 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.87□□□□□ -0.83
GBP3-208ENST00000493594 FBXW7Q969H0 707 aa9.87□□□□□ -0.83
GBP3-208ENST00000493594 NUDT16Q96DE0 195 aaKnown RBP9.87□□□□□ -0.83
GBP3-208ENST00000493594 ZSWIM6Q9HCJ5 1215 aa9.87□□□□□ -0.83
GBP3-208ENST00000493594 SH2B1Q9NRF2 756 aaPredicted RBP9.87□□□□□ -0.83
GBP3-208ENST00000493594 AATKQ6ZMQ8 1374 aa9.87□□□□□ -0.83
GBP3-208ENST00000493594 CRB1P82279 1406 aa9.87□□□□□ -0.83
GBP3-208ENST00000493594 SSH3Q8TE77 659 aa9.87□□□□□ -0.83
GBP3-208ENST00000493594 LEO1Q8WVC0 666 aaPredicted RBP9.87□□□□□ -0.83
GBP3-208ENST00000493594 GTF3C6Q969F1 213 aa9.87□□□□□ -0.83
GBP3-208ENST00000493594 DDX11Q96FC9 970 aa9.87□□□□□ -0.83
GBP3-208ENST00000493594 CLSTN2Q9H4D0 955 aa9.87□□□□□ -0.83
GBP3-208ENST00000493594 ZNF446Q9NWS9 450 aa9.87□□□□□ -0.83
GBP3-208ENST00000493594 NUTM2FA1L443 756 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 WASLO00401 505 aaPredicted RBP9.86□□□□□ -0.83
GBP3-208ENST00000493594 RAB11FIP3O75154 756 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 PGBD1Q96JS3 809 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 SCAND2PQ9GZW5 306 aaPredicted RBP9.86□□□□□ -0.83
GBP3-208ENST00000493594 DDX19AQ9NUU7 478 aaKnown RBP9.86□□□□□ -0.83
GBP3-208ENST00000493594 AOX1Q06278 1338 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 TUBGCP6Q96RT7 1819 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 EDC4Q6P2E9 1401 aaKnown RBP9.86□□□□□ -0.83
GBP3-208ENST00000493594 PIK3C2BO00750 1634 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 CCDC69A6NI79 296 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 ZKSCAN1P17029 563 aaPredicted RBP9.86□□□□□ -0.83
GBP3-208ENST00000493594 OS9Q13438 667 aaPredicted RBP9.86□□□□□ -0.83
GBP3-208ENST00000493594 ERCC6LQ2NKX8 1250 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 CCDC30Q5VVM6 783 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 TXNDC2Q86VQ3 553 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 KLHL34Q8N239 644 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 PHAXQ9H814 394 aaKnown RBP9.86□□□□□ -0.83
GBP3-208ENST00000493594 ELP1O95163 1332 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 NPHP3Q7Z494 1330 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 FRMPD1Q5SYB0 1578 aa9.86□□□□□ -0.83
GBP3-208ENST00000493594 SLU7O95391 586 aaKnown RBP9.85□□□□□ -0.83
GBP3-208ENST00000493594 NBPF7P0C2Y1 421 aaPredicted RBP9.85□□□□□ -0.83
GBP3-208ENST00000493594 C11orf57Q6ZUT1 292 aaPredicted RBP9.85□□□□□ -0.83
GBP3-208ENST00000493594 NYAP1Q6ZVC0 841 aa9.85□□□□□ -0.83
GBP3-208ENST00000493594 ERO1AQ96HE7 468 aa9.85□□□□□ -0.83
GBP3-208ENST00000493594 NOL10Q9BSC4 688 aaKnown RBP9.85□□□□□ -0.83
GBP3-208ENST00000493594 TTC21AQ8NDW8 1320 aa9.85□□□□□ -0.83
GBP3-208ENST00000493594 ATP7BP35670 1465 aa9.85□□□□□ -0.83
GBP3-208ENST00000493594 CLTCQ00610 1675 aaKnown RBP9.85□□□□□ -0.83
GBP3-208ENST00000493594 CAPN2P17655 700 aa9.85□□□□□ -0.83
GBP3-208ENST00000493594 CPS1P31327 1500 aa9.85□□□□□ -0.83
GBP3-208ENST00000493594 CCDC171Q6TFL3 1326 aa9.85□□□□□ -0.83
GBP3-208ENST00000493594 LRRN4CLQ8ND94 238 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms