RNA–Protein interactions for RNA: ENST00000493107.5

SEC22C-216, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 827 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-216ENST00000493107 CWF19L2Q2TBE0 894 aaKnown RBP11.88□□□□□ -0.51
SEC22C-216ENST00000493107 FAM196AQ6ZSG2 479 aa11.88□□□□□ -0.51
SEC22C-216ENST00000493107 CENPQQ7L2Z9 268 aaPredicted RBP11.88□□□□□ -0.51
SEC22C-216ENST00000493107 LINC00116Q8NCU8 138 aa11.88□□□□□ -0.51
SEC22C-216ENST00000493107 PLBD2Q8NHP8 589 aa11.88□□□□□ -0.51
SEC22C-216ENST00000493107 SRCIN1Q9C0H9 1055 aa11.88□□□□□ -0.51
SEC22C-216ENST00000493107 UTYO14607 1347 aa11.87□□□□□ -0.51
SEC22C-216ENST00000493107 TJP1Q07157 1748 aa11.87□□□□□ -0.51
SEC22C-216ENST00000493107 ALDH1L1O75891 902 aa11.87□□□□□ -0.51
SEC22C-216ENST00000493107 DDX58O95786 925 aaKnown RBP11.87□□□□□ -0.51
SEC22C-216ENST00000493107 CEP85Q6P2H3 762 aa11.87□□□□□ -0.51
SEC22C-216ENST00000493107 RIC3Q7Z5B4 369 aa11.87□□□□□ -0.51
SEC22C-216ENST00000493107 ANKRD44Q8N8A2 993 aa11.87□□□□□ -0.51
SEC22C-216ENST00000493107 LINS1Q8NG48 757 aa11.87□□□□□ -0.51
SEC22C-216ENST00000493107 LAMB4A4D0S4 1761 aa11.87□□□□□ -0.51
SEC22C-216ENST00000493107 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
SEC22C-216ENST00000493107 IL6STP40189 918 aaPredicted RBP11.86□□□□□ -0.51
SEC22C-216ENST00000493107 CRKLP46109 303 aaKnown RBP11.86□□□□□ -0.51
SEC22C-216ENST00000493107 SMC5Q8IY18 1101 aa11.86□□□□□ -0.51
SEC22C-216ENST00000493107 KAZALD1Q96I82 304 aa11.86□□□□□ -0.51
SEC22C-216ENST00000493107 MYD88Q99836 296 aa11.86□□□□□ -0.51
SEC22C-216ENST00000493107 CHMP4BQ9H444 224 aaKnown RBP11.86□□□□□ -0.51
SEC22C-216ENST00000493107 NHSQ6T4R5 1651 aa11.86□□□□□ -0.51
SEC22C-216ENST00000493107 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
SEC22C-216ENST00000493107 CASP7P55210 303 aa11.85□□□□□ -0.51
SEC22C-216ENST00000493107 HLFQ16534 295 aa11.85□□□□□ -0.51
SEC22C-216ENST00000493107 AMIGO3Q86WK7 504 aa11.85□□□□□ -0.51
SEC22C-216ENST00000493107 PROM2Q8N271 834 aa11.85□□□□□ -0.51
SEC22C-216ENST00000493107 ISCA1Q9BUE6 129 aa11.85□□□□□ -0.51
SEC22C-216ENST00000493107 RWDD1Q9H446 243 aaPredicted RBP11.85□□□□□ -0.51
SEC22C-216ENST00000493107 LRRC4BQ9NT99 713 aa11.85□□□□□ -0.51
SEC22C-216ENST00000493107 CCDC87Q9NVE4 849 aa11.85□□□□□ -0.51
SEC22C-216ENST00000493107 ATP5J2-PTCD1G3V325 749 aa11.84□□□□□ -0.51
SEC22C-216ENST00000493107 TRIM37O94972 964 aa11.84□□□□□ -0.51
SEC22C-216ENST00000493107 GNAI2P04899 355 aa11.84□□□□□ -0.51
SEC22C-216ENST00000493107 GNAI3P08754 354 aa11.84□□□□□ -0.51
SEC22C-216ENST00000493107 GCKRQ14397 625 aa11.84□□□□□ -0.51
SEC22C-216ENST00000493107 RPAP2Q8IXW5 612 aaPredicted RBP11.84□□□□□ -0.51
SEC22C-216ENST00000493107 LRRFIP2Q9Y608 721 aaKnown RBP11.84□□□□□ -0.51
SEC22C-216ENST00000493107 MAP3K15Q6ZN16 1313 aa11.84□□□□□ -0.51
SEC22C-216ENST00000493107 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
SEC22C-216ENST00000493107 ATP8B2P98198 1209 aa11.83□□□□□ -0.52
SEC22C-216ENST00000493107 TRIM28Q13263 835 aaKnown RBP11.83□□□□□ -0.52
SEC22C-216ENST00000493107 TCIRG1Q13488 830 aa11.83□□□□□ -0.52
SEC22C-216ENST00000493107 RC3H1Q5TC82 1133 aaKnown RBP11.83□□□□□ -0.52
SEC22C-216ENST00000493107 SMIM5Q71RC9 77 aa11.83□□□□□ -0.52
SEC22C-216ENST00000493107 ZBTB3Q9H5J0 574 aa11.83□□□□□ -0.52
SEC22C-216ENST00000493107 DCTPP1Q9H773 170 aa11.83□□□□□ -0.52
SEC22C-216ENST00000493107 RREB1Q92766 1687 aa11.82□□□□□ -0.52
SEC22C-216ENST00000493107 PNMA6EA0A0J9YXQ4 647 aa11.82□□□□□ -0.52
SEC22C-216ENST00000493107 ERVV-1B6SEH8 477 aa11.82□□□□□ -0.52
SEC22C-216ENST00000493107 H7C1W4 665 aa11.82□□□□□ -0.52
SEC22C-216ENST00000493107 GRM8O00222 908 aa11.82□□□□□ -0.52
SEC22C-216ENST00000493107 CAMTA2O94983 1202 aa11.82□□□□□ -0.52
SEC22C-216ENST00000493107 EPHA10Q5JZY3 1008 aa11.82□□□□□ -0.52
SEC22C-216ENST00000493107 SUCLG2Q96I99 432 aa11.82□□□□□ -0.52
SEC22C-216ENST00000493107 PDZRN3Q9UPQ7 1066 aa11.82□□□□□ -0.52
SEC22C-216ENST00000493107 EP400Q96L91 3159 aa11.81□□□□□ -0.52
SEC22C-216ENST00000493107 ZNF831Q5JPB2 1677 aa11.81□□□□□ -0.52
SEC22C-216ENST00000493107 UBTFL1P0CB47 393 aaPredicted RBP11.81□□□□□ -0.52
SEC22C-216ENST00000493107 POLA2Q14181 598 aa11.81□□□□□ -0.52
SEC22C-216ENST00000493107 GIGYF2Q6Y7W6 1299 aaKnown RBP11.81□□□□□ -0.52
SEC22C-216ENST00000493107 JARID2Q92833 1246 aaPredicted RBP11.81□□□□□ -0.52
SEC22C-216ENST00000493107 CCNL1Q9UK58 526 aaPredicted RBP11.81□□□□□ -0.52
SEC22C-216ENST00000493107 TBC1D2BQ9UPU7 963 aa11.81□□□□□ -0.52
SEC22C-216ENST00000493107 CACNA1FO60840 1977 aa11.81□□□□□ -0.52
SEC22C-216ENST00000493107 BRWD3Q6RI45 1802 aa11.81□□□□□ -0.52
SEC22C-216ENST00000493107 COL15A1P39059 1388 aa11.8□□□□□ -0.52
SEC22C-216ENST00000493107 N4BP2Q86UW6 1770 aaPredicted RBP11.8□□□□□ -0.52
SEC22C-216ENST00000493107 RPS6KA4O75676 772 aa11.8□□□□□ -0.52
SEC22C-216ENST00000493107 PDE4AP27815 886 aa11.8□□□□□ -0.52
SEC22C-216ENST00000493107 NUCB1Q02818 461 aa11.8□□□□□ -0.52
SEC22C-216ENST00000493107 NEXNQ0ZGT2 675 aa11.8□□□□□ -0.52
SEC22C-216ENST00000493107 MTX1Q13505 466 aa11.8□□□□□ -0.52
SEC22C-216ENST00000493107 DZIP3Q86Y13 1208 aaKnown RBP11.8□□□□□ -0.52
SEC22C-216ENST00000493107 ZNF34Q8IZ26 560 aa11.8□□□□□ -0.52
SEC22C-216ENST00000493107 SSH3Q8TE77 659 aa11.8□□□□□ -0.52
SEC22C-216ENST00000493107 BCL2L12Q9HB09 334 aa11.8□□□□□ -0.52
SEC22C-216ENST00000493107 BTAF1O14981 1849 aa11.79□□□□□ -0.52
SEC22C-216ENST00000493107 KIF6Q6ZMV9 814 aa11.79□□□□□ -0.52
SEC22C-216ENST00000493107 PPP1R42Q7Z4L9 355 aa11.79□□□□□ -0.52
SEC22C-216ENST00000493107 CCDC191Q8NCU4 936 aa11.79□□□□□ -0.52
SEC22C-216ENST00000493107 C9orf78Q9NZ63 289 aaPredicted RBP11.79□□□□□ -0.52
SEC22C-216ENST00000493107 ZNF330Q9Y3S2 320 aaPredicted RBP11.79□□□□□ -0.52
SEC22C-216ENST00000493107 SBF2Q86WG5 1849 aa11.79□□□□□ -0.52
SEC22C-216ENST00000493107 A0A087WZG4 1122 aa11.78□□□□□ -0.52
SEC22C-216ENST00000493107 PLSCR1O15162 318 aa11.78□□□□□ -0.52
SEC22C-216ENST00000493107 FOXO4P98177 505 aa11.78□□□□□ -0.52
SEC22C-216ENST00000493107 TXNRD1Q16881 649 aa11.78□□□□□ -0.52
SEC22C-216ENST00000493107 RABL6Q3YEC7 729 aaPredicted RBP11.78□□□□□ -0.52
SEC22C-216ENST00000493107 NLRP10Q86W26 655 aa11.78□□□□□ -0.52
SEC22C-216ENST00000493107 GCC1Q96CN9 775 aa11.78□□□□□ -0.52
SEC22C-216ENST00000493107 BICC1Q9H694 974 aaKnown RBP11.78□□□□□ -0.52
SEC22C-216ENST00000493107 CWC25Q9NXE8 425 aaPredicted RBP11.78□□□□□ -0.52
SEC22C-216ENST00000493107 UBN2Q6ZU65 1347 aa11.78□□□□□ -0.52
SEC22C-216ENST00000493107 COL5A3P25940 1745 aaPredicted RBP11.77□□□□□ -0.52
SEC22C-216ENST00000493107 NUP188Q5SRE5 1749 aa11.77□□□□□ -0.52
SEC22C-216ENST00000493107 RFX5P48382 616 aaPredicted RBP11.77□□□□□ -0.53
SEC22C-216ENST00000493107 SLC27A3Q5K4L6 730 aa11.77□□□□□ -0.53
SEC22C-216ENST00000493107 SYNE4Q8N205 404 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms