RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 DLEC1Q9Y238 1755 aa12.14□□□□□ -0.47
HDAC3-212ENST00000492407 AFDNP55196 1824 aaKnown RBP12.14□□□□□ -0.47
HDAC3-212ENST00000492407 NPHP1O15259 732 aa12.13□□□□□ -0.47
HDAC3-212ENST00000492407 PRELPP51888 382 aa12.13□□□□□ -0.47
HDAC3-212ENST00000492407 CNGB1Q14028 1251 aaPredicted RBP12.13□□□□□ -0.47
HDAC3-212ENST00000492407 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
HDAC3-212ENST00000492407 MCM10Q7L590 875 aa12.13□□□□□ -0.47
HDAC3-212ENST00000492407 KLRG1Q96E93 195 aa12.13□□□□□ -0.47
HDAC3-212ENST00000492407 VIRMAQ69YN4 1812 aaKnown RBP12.13□□□□□ -0.47
HDAC3-212ENST00000492407 SCN7AQ01118 1682 aa12.13□□□□□ -0.47
HDAC3-212ENST00000492407 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
HDAC3-212ENST00000492407 C21orf2O43822 256 aa12.12□□□□□ -0.47
HDAC3-212ENST00000492407 NBPF5PQ86XG9 351 aaPredicted RBP12.12□□□□□ -0.47
HDAC3-212ENST00000492407 TAOK3Q9H2K8 898 aa12.12□□□□□ -0.47
HDAC3-212ENST00000492407 SBF1O95248 1867 aa12.11□□□□□ -0.47
HDAC3-212ENST00000492407 NPR1P16066 1061 aa12.11□□□□□ -0.47
HDAC3-212ENST00000492407 ERFEQ4G0M1 354 aa12.11□□□□□ -0.47
HDAC3-212ENST00000492407 NBPF26B4DH59 902 aa12.1□□□□□ -0.47
HDAC3-212ENST00000492407 ERVV-1B6SEH8 477 aa12.1□□□□□ -0.47
HDAC3-212ENST00000492407 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
HDAC3-212ENST00000492407 NBPF10Q6P3W6 841 aaKnown RBP12.1□□□□□ -0.47
HDAC3-212ENST00000492407 NBPF15Q8N660 670 aa12.1□□□□□ -0.47
HDAC3-212ENST00000492407 C7orf43Q8WVR3 580 aa12.1□□□□□ -0.47
HDAC3-212ENST00000492407 POTECB2RU33 542 aa12.09□□□□□ -0.47
HDAC3-212ENST00000492407 ALDH1B1P30837 517 aa12.09□□□□□ -0.47
HDAC3-212ENST00000492407 RTKN2Q8IZC4 609 aa12.09□□□□□ -0.47
HDAC3-212ENST00000492407 PLEKHF1Q96S99 279 aa12.09□□□□□ -0.47
HDAC3-212ENST00000492407 NIP7Q9Y221 180 aaKnown RBP eCLIP12.09□□□□□ -0.47
HDAC3-212ENST00000492407 PRAMEF22A3QJZ6 481 aa12.08□□□□□ -0.48
HDAC3-212ENST00000492407 DCTN1Q14203 1278 aa12.08□□□□□ -0.48
HDAC3-212ENST00000492407 GRIPAP1Q4V328 841 aa12.08□□□□□ -0.48
HDAC3-212ENST00000492407 CCDC93Q567U6 631 aa12.08□□□□□ -0.48
HDAC3-212ENST00000492407 NYXQ9GZU5 481 aa12.08□□□□□ -0.48
HDAC3-212ENST00000492407 BABAM1Q9NWV8 329 aa12.08□□□□□ -0.48
HDAC3-212ENST00000492407 ERBB4Q15303 1308 aa12.08□□□□□ -0.48
HDAC3-212ENST00000492407 IQCA1LA6NCM1 817 aa12.07□□□□□ -0.48
HDAC3-212ENST00000492407 NFE2L2Q16236 605 aa12.07□□□□□ -0.48
HDAC3-212ENST00000492407 CC2D2BQ6DHV5 1058 aa12.07□□□□□ -0.48
HDAC3-212ENST00000492407 CCDC24Q8N4L8 307 aa12.07□□□□□ -0.48
HDAC3-212ENST00000492407 ANKRD31Q8N7Z5 1873 aa12.07□□□□□ -0.48
HDAC3-212ENST00000492407 L3MBTL3Q96JM7 780 aaPredicted RBP12.07□□□□□ -0.48
HDAC3-212ENST00000492407 WDR90Q96KV7 1748 aa12.07□□□□□ -0.48
HDAC3-212ENST00000492407 BCL11AQ9H165 835 aa12.07□□□□□ -0.48
HDAC3-212ENST00000492407 BCORQ6W2J9 1755 aa12.06□□□□□ -0.48
HDAC3-212ENST00000492407 EIF4A1P60842 406 aaKnown RBP12.06□□□□□ -0.48
HDAC3-212ENST00000492407 FKBP4Q02790 459 aaKnown RBP eCLIP12.06□□□□□ -0.48
HDAC3-212ENST00000492407 CRY2Q49AN0 593 aa12.06□□□□□ -0.48
HDAC3-212ENST00000492407 CHADLQ6NUI6 762 aa12.06□□□□□ -0.48
HDAC3-212ENST00000492407 IBTKQ9P2D0 1353 aaPredicted RBP12.05□□□□□ -0.48
HDAC3-212ENST00000492407 RIC1Q4ADV7 1423 aa12.05□□□□□ -0.48
HDAC3-212ENST00000492407 GTF2E1P29083 439 aaPredicted RBP12.05□□□□□ -0.48
HDAC3-212ENST00000492407 PIP4K2AP48426 406 aaPredicted RBP12.05□□□□□ -0.48
HDAC3-212ENST00000492407 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
HDAC3-212ENST00000492407 MAP3K15Q6ZN16 1313 aa12.05□□□□□ -0.48
HDAC3-212ENST00000492407 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
HDAC3-212ENST00000492407 FER1L6Q2WGJ9 1857 aa12.04□□□□□ -0.48
HDAC3-212ENST00000492407 HOXA10P31260 410 aaPredicted RBP12.04□□□□□ -0.48
HDAC3-212ENST00000492407 RALBP1Q15311 655 aa12.04□□□□□ -0.48
HDAC3-212ENST00000492407 HLFQ16534 295 aa12.04□□□□□ -0.48
HDAC3-212ENST00000492407 KIF6Q6ZMV9 814 aa12.04□□□□□ -0.48
HDAC3-212ENST00000492407 PSMD1Q99460 953 aa12.04□□□□□ -0.48
HDAC3-212ENST00000492407 CREBZFQ9NS37 354 aa12.04□□□□□ -0.48
HDAC3-212ENST00000492407 MIS18AQ9NYP9 233 aa12.04□□□□□ -0.48
HDAC3-212ENST00000492407 COL11A2P13942 1736 aaPredicted RBP12.03□□□□□ -0.48
HDAC3-212ENST00000492407 DDNO94850 711 aaPredicted RBP12.03□□□□□ -0.48
HDAC3-212ENST00000492407 HTRA3P83110 453 aa12.03□□□□□ -0.48
HDAC3-212ENST00000492407 LMOD3Q0VAK6 560 aa12.03□□□□□ -0.48
HDAC3-212ENST00000492407 TIAM2Q8IVF5 1701 aa12.03□□□□□ -0.48
HDAC3-212ENST00000492407 FZD9O00144 591 aa12.02□□□□□ -0.49
HDAC3-212ENST00000492407 PARP10Q53GL7 1025 aa12.02□□□□□ -0.49
HDAC3-212ENST00000492407 GIGYF2Q6Y7W6 1299 aaKnown RBP12.02□□□□□ -0.49
HDAC3-212ENST00000492407 PNMA8AQ86V59 439 aaPredicted RBP12.02□□□□□ -0.49
HDAC3-212ENST00000492407 LDHDQ86WU2 507 aa12.02□□□□□ -0.49
HDAC3-212ENST00000492407 ZNF34Q8IZ26 560 aa12.02□□□□□ -0.49
HDAC3-212ENST00000492407 RNF123Q5XPI4 1314 aa12.02□□□□□ -0.49
HDAC3-212ENST00000492407 ARFGEF2Q9Y6D5 1785 aa12.02□□□□□ -0.49
HDAC3-212ENST00000492407 SLX4Q8IY92 1834 aa12.02□□□□□ -0.49
HDAC3-212ENST00000492407 DICER1Q9UPY3 1922 aaKnown RBP12.01□□□□□ -0.49
HDAC3-212ENST00000492407 PPP1R42Q7Z4L9 355 aa12.01□□□□□ -0.49
HDAC3-212ENST00000492407 CRAMP1Q96RY5 1269 aa12.01□□□□□ -0.49
HDAC3-212ENST00000492407 VPS33BQ9H267 617 aa12.01□□□□□ -0.49
HDAC3-212ENST00000492407 TAF1DQ9H5J8 278 aaPredicted RBP12.01□□□□□ -0.49
HDAC3-212ENST00000492407 RRP7AQ9Y3A4 280 aaKnown RBP12.01□□□□□ -0.49
HDAC3-212ENST00000492407 IARSP41252 1262 aaKnown RBP12□□□□□ -0.49
HDAC3-212ENST00000492407 SLC10A5Q5PT55 438 aa12□□□□□ -0.49
HDAC3-212ENST00000492407 GPC2Q8N158 579 aa12□□□□□ -0.49
HDAC3-212ENST00000492407 SYNE4Q8N205 404 aa12□□□□□ -0.49
HDAC3-212ENST00000492407 JDP2Q8WYK2 163 aa12□□□□□ -0.49
HDAC3-212ENST00000492407 RPGRQ92834 1020 aaKnown RBP12□□□□□ -0.49
HDAC3-212ENST00000492407 RBM17Q96I25 401 aaKnown RBP12□□□□□ -0.49
HDAC3-212ENST00000492407 ZNF277Q9NRM2 450 aaPredicted RBP12□□□□□ -0.49
HDAC3-212ENST00000492407 HACL1Q9UJ83 578 aa12□□□□□ -0.49
HDAC3-212ENST00000492407 FAM177BA6PVY3 158 aa11.99□□□□□ -0.49
HDAC3-212ENST00000492407 RIPK4P57078 832 aa11.99□□□□□ -0.49
HDAC3-212ENST00000492407 SUSD4Q5VX71 490 aa11.99□□□□□ -0.49
HDAC3-212ENST00000492407 TTLL7Q6ZT98 887 aa11.99□□□□□ -0.49
HDAC3-212ENST00000492407 NGEFQ8N5V2 710 aa11.99□□□□□ -0.49
HDAC3-212ENST00000492407 RTN4Q9NQC3 1192 aaKnown RBP11.99□□□□□ -0.49
HDAC3-212ENST00000492407 TSPYL4Q9UJ04 414 aa11.99□□□□□ -0.49
HDAC3-212ENST00000492407 PASKQ96RG2 1323 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms