RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
HPS4-215ENST00000491142 IL13P35225 146 aa11.45□□□□□ -0.58
HPS4-215ENST00000491142 ERFEQ4G0M1 354 aa11.45□□□□□ -0.58
HPS4-215ENST00000491142 CCDC24Q8N4L8 307 aa11.45□□□□□ -0.58
HPS4-215ENST00000491142 ZNF622Q969S3 477 aaKnown RBP eCLIP11.45□□□□□ -0.58
HPS4-215ENST00000491142 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
HPS4-215ENST00000491142 TIAM2Q8IVF5 1701 aa11.45□□□□□ -0.58
HPS4-215ENST00000491142 SCN11AQ9UI33 1791 aa11.44□□□□□ -0.58
HPS4-215ENST00000491142 DLEC1Q9Y238 1755 aa11.44□□□□□ -0.58
HPS4-215ENST00000491142 MYBBP1AQ9BQG0 1328 aaKnown RBP11.44□□□□□ -0.58
HPS4-215ENST00000491142 FOXN1O15353 648 aa11.44□□□□□ -0.58
HPS4-215ENST00000491142 RNMTO43148 476 aaKnown RBP11.44□□□□□ -0.58
HPS4-215ENST00000491142 DDNO94850 711 aaPredicted RBP11.44□□□□□ -0.58
HPS4-215ENST00000491142 TBC1D9BQ66K14 1250 aa11.44□□□□□ -0.58
HPS4-215ENST00000491142 MORC1Q86VD1 984 aa11.44□□□□□ -0.58
HPS4-215ENST00000491142 PER1O15534 1290 aaPredicted RBP11.43□□□□□ -0.58
HPS4-215ENST00000491142 EIF5P55010 431 aaKnown RBP11.42□□□□□ -0.58
HPS4-215ENST00000491142 VSIG10Q8N0Z9 540 aa11.42□□□□□ -0.58
HPS4-215ENST00000491142 BRIP1Q9BX63 1249 aa11.42□□□□□ -0.58
HPS4-215ENST00000491142 HMOX1P09601 288 aa11.41□□□□□ -0.58
HPS4-215ENST00000491142 PDE6BP35913 854 aa11.41□□□□□ -0.58
HPS4-215ENST00000491142 MTHFSDQ2M296 383 aaKnown RBP11.41□□□□□ -0.58
HPS4-215ENST00000491142 PRR5LQ6MZQ0 368 aa11.41□□□□□ -0.58
HPS4-215ENST00000491142 FAM9BQ8IZU0 186 aa11.41□□□□□ -0.58
HPS4-215ENST00000491142 TAOK3Q9H2K8 898 aa11.41□□□□□ -0.58
HPS4-215ENST00000491142 PRDM10Q9NQV6 1147 aa11.41□□□□□ -0.58
HPS4-215ENST00000491142 CNTNAP1P78357 1384 aa11.41□□□□□ -0.58
HPS4-215ENST00000491142 MRC1P22897 1456 aa11.4□□□□□ -0.58
HPS4-215ENST00000491142 C19orf67A6NJJ6 358 aa11.4□□□□□ -0.58
HPS4-215ENST00000491142 VEGFBP49765 207 aa11.4□□□□□ -0.58
HPS4-215ENST00000491142 TBC1D2BQ9UPU7 963 aa11.4□□□□□ -0.58
HPS4-215ENST00000491142 ANKRD31Q8N7Z5 1873 aa11.4□□□□□ -0.59
HPS4-215ENST00000491142 PASKQ96RG2 1323 aa11.39□□□□□ -0.59
HPS4-215ENST00000491142 LTBP3Q9NS15 1303 aa11.39□□□□□ -0.59
HPS4-215ENST00000491142 A0A087WZG4 1122 aa11.39□□□□□ -0.59
HPS4-215ENST00000491142 STARD3NLO95772 234 aa11.39□□□□□ -0.59
HPS4-215ENST00000491142 NEFLP07196 543 aa11.39□□□□□ -0.59
HPS4-215ENST00000491142 FER1L6Q2WGJ9 1857 aa11.39□□□□□ -0.59
HPS4-215ENST00000491142 PNISRQ8TF01 805 aaKnown RBP11.39□□□□□ -0.59
HPS4-215ENST00000491142 PDZRN3Q9UPQ7 1066 aa11.39□□□□□ -0.59
HPS4-215ENST00000491142 ZNF330Q9Y3S2 320 aaPredicted RBP11.39□□□□□ -0.59
HPS4-215ENST00000491142 ITGBL1O95965 494 aaPredicted RBP11.38□□□□□ -0.59
HPS4-215ENST00000491142 CTCFP49711 727 aaPredicted RBP11.38□□□□□ -0.59
HPS4-215ENST00000491142 PRPF40BQ6NWY9 871 aaKnown RBP11.38□□□□□ -0.59
HPS4-215ENST00000491142 LDHDQ86WU2 507 aa11.38□□□□□ -0.59
HPS4-215ENST00000491142 ZNF496Q96IT1 587 aaPredicted RBP11.38□□□□□ -0.59
HPS4-215ENST00000491142 TAF1DQ9H5J8 278 aaPredicted RBP11.38□□□□□ -0.59
HPS4-215ENST00000491142 FARP1Q9Y4F1 1045 aaPredicted RBP11.38□□□□□ -0.59
HPS4-215ENST00000491142 DICER1Q9UPY3 1922 aaKnown RBP11.38□□□□□ -0.59
HPS4-215ENST00000491142 NPC1L1Q9UHC9 1359 aa11.38□□□□□ -0.59
HPS4-215ENST00000491142 COL11A2P13942 1736 aaPredicted RBP11.38□□□□□ -0.59
HPS4-215ENST00000491142 TMEM88BA6NKF7 163 aa11.37□□□□□ -0.59
HPS4-215ENST00000491142 SRGNP10124 158 aa11.37□□□□□ -0.59
HPS4-215ENST00000491142 LBX1P52954 281 aa11.37□□□□□ -0.59
HPS4-215ENST00000491142 STYK1Q6J9G0 422 aa11.37□□□□□ -0.59
HPS4-215ENST00000491142 TTC5Q8N0Z6 440 aa11.37□□□□□ -0.59
HPS4-215ENST00000491142 CNKSR1Q969H4 720 aa11.37□□□□□ -0.59
HPS4-215ENST00000491142 AIDAQ96BJ3 306 aa11.37□□□□□ -0.59
HPS4-215ENST00000491142 WBP1LQ9NX94 342 aa11.37□□□□□ -0.59
HPS4-215ENST00000491142 SLX4Q8IY92 1834 aa11.37□□□□□ -0.59
HPS4-215ENST00000491142 IQCA1LA6NCM1 817 aa11.36□□□□□ -0.59
HPS4-215ENST00000491142 A1BGP04217 495 aa11.36□□□□□ -0.59
HPS4-215ENST00000491142 EAPPQ56P03 285 aaPredicted RBP11.36□□□□□ -0.59
HPS4-215ENST00000491142 CNBD1Q8NA66 436 aa11.36□□□□□ -0.59
HPS4-215ENST00000491142 MASTLQ96GX5 879 aa11.36□□□□□ -0.59
HPS4-215ENST00000491142 L3MBTL3Q96JM7 780 aaPredicted RBP11.36□□□□□ -0.59
HPS4-215ENST00000491142 SETDB2Q96T68 719 aa11.36□□□□□ -0.59
HPS4-215ENST00000491142 KNSTRNQ9Y448 316 aa11.36□□□□□ -0.59
HPS4-215ENST00000491142 NPHP1O15259 732 aa11.35□□□□□ -0.59
HPS4-215ENST00000491142 CAMTA2O94983 1202 aa11.35□□□□□ -0.59
HPS4-215ENST00000491142 SLC34A2O95436 690 aa11.35□□□□□ -0.59
HPS4-215ENST00000491142 IL6STP40189 918 aaPredicted RBP11.35□□□□□ -0.59
HPS4-215ENST00000491142 ZNF790Q6PG37 636 aa11.35□□□□□ -0.59
HPS4-215ENST00000491142 IL17REQ8NFR9 667 aa11.35□□□□□ -0.59
HPS4-215ENST00000491142 C7orf43Q8WVR3 580 aa11.35□□□□□ -0.59
HPS4-215ENST00000491142 HEG1Q9ULI3 1381 aa11.35□□□□□ -0.59
HPS4-215ENST00000491142 UBR2Q8IWV8 1755 aa11.35□□□□□ -0.59
HPS4-215ENST00000491142 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
HPS4-215ENST00000491142 ZNF541Q9H0D2 1346 aa11.35□□□□□ -0.59
HPS4-215ENST00000491142 ST5P78524 1137 aa11.34□□□□□ -0.59
HPS4-215ENST00000491142 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
HPS4-215ENST00000491142 SOGA3Q5TF21 947 aa11.34□□□□□ -0.59
HPS4-215ENST00000491142 ERICH6BQ5W0A0 696 aa11.34□□□□□ -0.59
HPS4-215ENST00000491142 OLFM4Q6UX06 510 aa11.34□□□□□ -0.59
HPS4-215ENST00000491142 TEX13AQ9BXU3 409 aaPredicted RBP11.34□□□□□ -0.59
HPS4-215ENST00000491142 ZNF277Q9NRM2 450 aaPredicted RBP11.34□□□□□ -0.59
HPS4-215ENST00000491142 SCN7AQ01118 1682 aa11.33□□□□□ -0.6
HPS4-215ENST00000491142 DIAPH1O60610 1272 aaKnown RBP11.33□□□□□ -0.6
HPS4-215ENST00000491142 HSPA8P11142 646 aaKnown RBP11.33□□□□□ -0.6
HPS4-215ENST00000491142 EPHX2P34913 555 aa11.33□□□□□ -0.6
HPS4-215ENST00000491142 PIP4K2AP48426 406 aaPredicted RBP11.33□□□□□ -0.6
HPS4-215ENST00000491142 TEFQ10587 303 aa11.33□□□□□ -0.6
HPS4-215ENST00000491142 DEFB115Q30KQ5 88 aa11.33□□□□□ -0.6
HPS4-215ENST00000491142 FAM161AQ3B820 660 aa11.33□□□□□ -0.6
HPS4-215ENST00000491142 CCDC93Q567U6 631 aa11.33□□□□□ -0.6
HPS4-215ENST00000491142 MAP1SQ66K74 1059 aaPredicted RBP11.33□□□□□ -0.6
HPS4-215ENST00000491142 CNTROBQ8N137 903 aa11.33□□□□□ -0.6
HPS4-215ENST00000491142 ABHD8Q96I13 439 aa11.33□□□□□ -0.6
HPS4-215ENST00000491142 HACL1Q9UJ83 578 aa11.33□□□□□ -0.6
HPS4-215ENST00000491142 CACNA1SQ13698 1873 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms