RNA–Protein interactions for RNA: ENST00000488943.1

REPIN1-213, Transcript of replication initiator 1, humanhuman

TSL 5

Gene REPIN1, Length 1,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-213ENST00000488943 TAF1DQ9H5J8 278 aaPredicted RBP27.48■■□□□ 1.99
REPIN1-213ENST00000488943 VEGFBP49765 207 aa27.47■■□□□ 1.99
REPIN1-213ENST00000488943 EAPPQ56P03 285 aaPredicted RBP27.47■■□□□ 1.99
REPIN1-213ENST00000488943 L3MBTL3Q96JM7 780 aaPredicted RBP27.47■■□□□ 1.99
REPIN1-213ENST00000488943 DIAPH1O60610 1272 aaKnown RBP27.46■■□□□ 1.99
REPIN1-213ENST00000488943 TRIM26Q12899 539 aaPredicted RBP27.46■■□□□ 1.99
REPIN1-213ENST00000488943 ZNF790Q6PG37 636 aa27.46■■□□□ 1.99
REPIN1-213ENST00000488943 CLEC11AQ9Y240 323 aa27.46■■□□□ 1.99
REPIN1-213ENST00000488943 CCDC93Q567U6 631 aa27.45■■□□□ 1.98
REPIN1-213ENST00000488943 FMNL2Q96PY5 1086 aa27.43■■□□□ 1.98
REPIN1-213ENST00000488943 CAMTA2O94983 1202 aa27.42■■□□□ 1.98
REPIN1-213ENST00000488943 LBX1P52954 281 aa27.42■■□□□ 1.98
REPIN1-213ENST00000488943 HACL1Q9UJ83 578 aa27.42■■□□□ 1.98
REPIN1-213ENST00000488943 ITGBL1O95965 494 aaPredicted RBP27.41■■□□□ 1.98
REPIN1-213ENST00000488943 A1BGP04217 495 aa27.41■■□□□ 1.98
REPIN1-213ENST00000488943 AMER1Q5JTC6 1135 aaPredicted RBP27.41■■□□□ 1.98
REPIN1-213ENST00000488943 DZIP3Q86Y13 1208 aaKnown RBP27.41■■□□□ 1.98
REPIN1-213ENST00000488943 WBP1LQ9NX94 342 aa27.41■■□□□ 1.98
REPIN1-213ENST00000488943 BCORQ6W2J9 1755 aa27.4■■□□□ 1.98
REPIN1-213ENST00000488943 GNAT3A8MTJ3 354 aa27.4■■□□□ 1.98
REPIN1-213ENST00000488943 NBPF5PQ86XG9 351 aaPredicted RBP27.4■■□□□ 1.98
REPIN1-213ENST00000488943 GAS2L2Q8NHY3 880 aa27.4■■□□□ 1.98
REPIN1-213ENST00000488943 FKBP4Q02790 459 aaKnown RBP eCLIP27.39■■□□□ 1.98
REPIN1-213ENST00000488943 NPR1P16066 1061 aa27.38■■□□□ 1.97
REPIN1-213ENST00000488943 EPHX2P34913 555 aa27.38■■□□□ 1.97
REPIN1-213ENST00000488943 DEFB115Q30KQ5 88 aa27.38■■□□□ 1.97
REPIN1-213ENST00000488943 PNMA8AQ86V59 439 aaPredicted RBP27.38■■□□□ 1.97
REPIN1-213ENST00000488943 IL17REQ8NFR9 667 aa27.38■■□□□ 1.97
REPIN1-213ENST00000488943 ZNF541Q9H0D2 1346 aa27.38■■□□□ 1.97
REPIN1-213ENST00000488943 SIPA1L3O60292 1781 aaPredicted RBP27.37■■□□□ 1.97
REPIN1-213ENST00000488943 ZNF277Q9NRM2 450 aaPredicted RBP27.37■■□□□ 1.97
REPIN1-213ENST00000488943 ZNF652Q9Y2D9 606 aa27.37■■□□□ 1.97
REPIN1-213ENST00000488943 C7orf43Q8WVR3 580 aa27.36■■□□□ 1.97
REPIN1-213ENST00000488943 CLSPNQ9HAW4 1339 aa27.36■■□□□ 1.97
REPIN1-213ENST00000488943 RASSF10A6NK89 507 aa27.35■■□□□ 1.97
REPIN1-213ENST00000488943 MAP2K1Q02750 393 aaPredicted RBP27.35■■□□□ 1.97
REPIN1-213ENST00000488943 RTKN2Q8IZC4 609 aa27.35■■□□□ 1.97
REPIN1-213ENST00000488943 CNTROBQ8N137 903 aa27.35■■□□□ 1.97
REPIN1-213ENST00000488943 ABT1Q9ULW3 272 aaKnown RBP27.35■■□□□ 1.97
REPIN1-213ENST00000488943 U2SURPO15042 1029 aaKnown RBP27.34■■□□□ 1.97
REPIN1-213ENST00000488943 CLEC4GQ6UXB4 293 aa27.34■■□□□ 1.97
REPIN1-213ENST00000488943 ABHD8Q96I13 439 aa27.34■■□□□ 1.97
REPIN1-213ENST00000488943 RNF123Q5XPI4 1314 aa27.34■■□□□ 1.97
REPIN1-213ENST00000488943 ADAMTSL1Q8N6G6 1762 aa27.33■■□□□ 1.97
REPIN1-213ENST00000488943 BTBD11A6QL63 1104 aa27.33■■□□□ 1.97
REPIN1-213ENST00000488943 HSPA8P11142 646 aaKnown RBP27.33■■□□□ 1.97
REPIN1-213ENST00000488943 MAP1SQ66K74 1059 aaPredicted RBP27.33■■□□□ 1.97
REPIN1-213ENST00000488943 WDR33Q9C0J8 1336 aaKnown RBP27.33■■□□□ 1.97
REPIN1-213ENST00000488943 TPTE2Q6XPS3 522 aa27.32■■□□□ 1.96
REPIN1-213ENST00000488943 SLC34A2O95436 690 aa27.31■■□□□ 1.96
REPIN1-213ENST00000488943 IARSP41252 1262 aaKnown RBP27.31■■□□□ 1.96
REPIN1-213ENST00000488943 PIP4K2AP48426 406 aaPredicted RBP27.3■■□□□ 1.96
REPIN1-213ENST00000488943 FAM161AQ3B820 660 aa27.3■■□□□ 1.96
REPIN1-213ENST00000488943 CC2D1BQ5T0F9 858 aaKnown RBP27.3■■□□□ 1.96
REPIN1-213ENST00000488943 ALDH1B1P30837 517 aa27.29■■□□□ 1.96
REPIN1-213ENST00000488943 GPC2Q8N158 579 aa27.29■■□□□ 1.96
REPIN1-213ENST00000488943 JDP2Q8WYK2 163 aa27.29■■□□□ 1.96
REPIN1-213ENST00000488943 USP16Q9Y5T5 823 aa27.29■■□□□ 1.96
REPIN1-213ENST00000488943 FZD9O00144 591 aa27.28■■□□□ 1.96
REPIN1-213ENST00000488943 KCNQ3O43525 872 aa27.28■■□□□ 1.96
REPIN1-213ENST00000488943 OLFM4Q6UX06 510 aa27.28■■□□□ 1.96
REPIN1-213ENST00000488943 SYNE4Q8N205 404 aa27.28■■□□□ 1.96
REPIN1-213ENST00000488943 BEGAINQ9BUH8 593 aa27.28■■□□□ 1.96
REPIN1-213ENST00000488943 PCGF6Q9BYE7 350 aa27.28■■□□□ 1.96
REPIN1-213ENST00000488943 NIP7Q9Y221 180 aaKnown RBP eCLIP27.28■■□□□ 1.96
REPIN1-213ENST00000488943 KLRG2A4D1S0 409 aaPredicted RBP27.27■■□□□ 1.96
REPIN1-213ENST00000488943 FAM177BA6PVY3 158 aa27.27■■□□□ 1.96
REPIN1-213ENST00000488943 GTF2E1P29083 439 aaPredicted RBP27.27■■□□□ 1.96
REPIN1-213ENST00000488943 PAXIP1Q6ZW49 1069 aaPredicted RBP27.27■■□□□ 1.96
REPIN1-213ENST00000488943 CEMIPQ8WUJ3 1361 aa27.26■■□□□ 1.95
REPIN1-213ENST00000488943 LMOD1P29536 600 aaPredicted RBP27.26■■□□□ 1.95
REPIN1-213ENST00000488943 EIF6P56537 245 aaKnown RBP27.25■■□□□ 1.95
REPIN1-213ENST00000488943 DDX21Q9NR30 783 aaKnown RBP eCLIP27.25■■□□□ 1.95
REPIN1-213ENST00000488943 ECE1P42892 770 aa27.24■■□□□ 1.95
REPIN1-213ENST00000488943 GJA3Q9Y6H8 435 aa27.24■■□□□ 1.95
REPIN1-213ENST00000488943 SNRPA1P09661 255 aaKnown RBP27.23■■□□□ 1.95
REPIN1-213ENST00000488943 COL3A1P02461 1466 aaPredicted RBP27.22■■□□□ 1.95
REPIN1-213ENST00000488943 CCDC85CA6NKD9 419 aa27.22■■□□□ 1.95
REPIN1-213ENST00000488943 GRM1Q13255 1194 aa27.22■■□□□ 1.95
REPIN1-213ENST00000488943 PSMD1Q99460 953 aa27.22■■□□□ 1.95
REPIN1-213ENST00000488943 PRAMEF22A3QJZ6 481 aa27.21■■□□□ 1.95
REPIN1-213ENST00000488943 RGL2O15211 777 aa27.21■■□□□ 1.95
REPIN1-213ENST00000488943 KIF7Q2M1P5 1343 aa27.2■■□□□ 1.95
REPIN1-213ENST00000488943 MLLT1Q03111 559 aaPredicted RBP27.2■■□□□ 1.94
REPIN1-213ENST00000488943 CNGB1Q14028 1251 aaPredicted RBP27.2■■□□□ 1.94
REPIN1-213ENST00000488943 CAPNS2Q96L46 248 aa27.2■■□□□ 1.94
REPIN1-213ENST00000488943 RTF1Q92541 710 aaKnown RBP27.19■■□□□ 1.94
REPIN1-213ENST00000488943 PER1O15534 1290 aaPredicted RBP27.18■■□□□ 1.94
REPIN1-213ENST00000488943 CC2D2BQ6DHV5 1058 aa27.18■■□□□ 1.94
REPIN1-213ENST00000488943 THSD7BQ9C0I4 1608 aa27.17■■□□□ 1.94
REPIN1-213ENST00000488943 PRKAR2BP31323 418 aa27.17■■□□□ 1.94
REPIN1-213ENST00000488943 PHACTR3Q96KR7 559 aa27.17■■□□□ 1.94
REPIN1-213ENST00000488943 GPR101Q96P66 508 aaPredicted RBP27.17■■□□□ 1.94
REPIN1-213ENST00000488943 CYP4F22Q6NT55 531 aa27.16■■□□□ 1.94
REPIN1-213ENST00000488943 NYXQ9GZU5 481 aa27.16■■□□□ 1.94
REPIN1-213ENST00000488943 LARGE2Q8N3Y3 721 aa27.15■■□□□ 1.94
REPIN1-213ENST00000488943 RPGRQ92834 1020 aaKnown RBP27.15■■□□□ 1.94
REPIN1-213ENST00000488943 TRPM7Q96QT4 1865 aa27.15■■□□□ 1.94
REPIN1-213ENST00000488943 NBPF26B4DH59 902 aa27.14■■□□□ 1.94
REPIN1-213ENST00000488943 HLFQ16534 295 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms