RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 TAF7Q15545 349 aaPredicted RBP14.9□□□□□ -0.02
VAMP7-206ENST00000488344 SOGA3Q5TF21 947 aa14.9□□□□□ -0.02
VAMP7-206ENST00000488344 PRR5LQ6MZQ0 368 aa14.9□□□□□ -0.02
VAMP7-206ENST00000488344 ZNF622Q969S3 477 aaKnown RBP eCLIP14.9□□□□□ -0.02
VAMP7-206ENST00000488344 SIPA1L3O60292 1781 aaPredicted RBP14.9□□□□□ -0.02
VAMP7-206ENST00000488344 VIRMAQ69YN4 1812 aaKnown RBP14.89□□□□□ -0.03
VAMP7-206ENST00000488344 KCNQ3O43525 872 aa14.89□□□□□ -0.03
VAMP7-206ENST00000488344 RASSF7Q02833 373 aa14.89□□□□□ -0.03
VAMP7-206ENST00000488344 CNKSR1Q969H4 720 aa14.89□□□□□ -0.03
VAMP7-206ENST00000488344 USP16Q9Y5T5 823 aa14.89□□□□□ -0.03
VAMP7-206ENST00000488344 STYK1Q6J9G0 422 aa14.88□□□□□ -0.03
VAMP7-206ENST00000488344 SP7Q8TDD2 431 aaPredicted RBP14.88□□□□□ -0.03
VAMP7-206ENST00000488344 GLTPD2A6NH11 291 aa14.87□□□□□ -0.03
VAMP7-206ENST00000488344 DPY19L2Q6NUT2 758 aa14.87□□□□□ -0.03
VAMP7-206ENST00000488344 NBPF5PQ86XG9 351 aaPredicted RBP14.87□□□□□ -0.03
VAMP7-206ENST00000488344 CEP350Q5VT06 3117 aa14.87□□□□□ -0.03
VAMP7-206ENST00000488344 MAPK8IP3Q9UPT6 1336 aa14.87□□□□□ -0.03
VAMP7-206ENST00000488344 AFDNP55196 1824 aaKnown RBP14.87□□□□□ -0.03
VAMP7-206ENST00000488344 DLEC1Q9Y238 1755 aa14.86□□□□□ -0.03
VAMP7-206ENST00000488344 VEGFAP15692 232 aaPredicted RBP14.86□□□□□ -0.03
VAMP7-206ENST00000488344 DCTN1Q14203 1278 aa14.86□□□□□ -0.03
VAMP7-206ENST00000488344 SMC1BQ8NDV3 1235 aa14.86□□□□□ -0.03
VAMP7-206ENST00000488344 MASTLQ96GX5 879 aa14.86□□□□□ -0.03
VAMP7-206ENST00000488344 RRAGCQ9HB90 399 aa14.86□□□□□ -0.03
VAMP7-206ENST00000488344 LTBP3Q9NS15 1303 aa14.86□□□□□ -0.03
VAMP7-206ENST00000488344 TNRC6CQ9HCJ0 1690 aaKnown RBP14.85□□□□□ -0.03
VAMP7-206ENST00000488344 NFKBIEO00221 500 aa14.85□□□□□ -0.03
VAMP7-206ENST00000488344 C21orf2O43822 256 aa14.85□□□□□ -0.03
VAMP7-206ENST00000488344 SRGNP10124 158 aa14.85□□□□□ -0.03
VAMP7-206ENST00000488344 TPTE2Q6XPS3 522 aa14.85□□□□□ -0.03
VAMP7-206ENST00000488344 POLA2Q14181 598 aa14.84□□□□□ -0.03
VAMP7-206ENST00000488344 NFE2L2Q16236 605 aa14.84□□□□□ -0.03
VAMP7-206ENST00000488344 TAOK3Q9H2K8 898 aa14.84□□□□□ -0.03
VAMP7-206ENST00000488344 PRAMEF22A3QJZ6 481 aa14.83□□□□□ -0.04
VAMP7-206ENST00000488344 PIP4K2AP48426 406 aaPredicted RBP14.83□□□□□ -0.04
VAMP7-206ENST00000488344 ERFEQ4G0M1 354 aa14.83□□□□□ -0.04
VAMP7-206ENST00000488344 PRPF40BQ6NWY9 871 aaKnown RBP14.83□□□□□ -0.04
VAMP7-206ENST00000488344 CCDC24Q8N4L8 307 aa14.83□□□□□ -0.04
VAMP7-206ENST00000488344 NIP7Q9Y221 180 aaKnown RBP eCLIP14.83□□□□□ -0.04
VAMP7-206ENST00000488344 NBPF26B4DH59 902 aa14.82□□□□□ -0.04
VAMP7-206ENST00000488344 NPR1P16066 1061 aa14.82□□□□□ -0.04
VAMP7-206ENST00000488344 RALBP1Q15311 655 aa14.82□□□□□ -0.04
VAMP7-206ENST00000488344 NBPF10Q6P3W6 841 aaKnown RBP14.82□□□□□ -0.04
VAMP7-206ENST00000488344 NBPF15Q8N660 670 aa14.82□□□□□ -0.04
VAMP7-206ENST00000488344 NYXQ9GZU5 481 aa14.82□□□□□ -0.04
VAMP7-206ENST00000488344 BCORQ6W2J9 1755 aa14.82□□□□□ -0.04
VAMP7-206ENST00000488344 ERVV-1B6SEH8 477 aa14.81□□□□□ -0.04
VAMP7-206ENST00000488344 GTF2E1P29083 439 aaPredicted RBP14.81□□□□□ -0.04
VAMP7-206ENST00000488344 LMOD3Q0VAK6 560 aa14.81□□□□□ -0.04
VAMP7-206ENST00000488344 CCDC93Q567U6 631 aa14.81□□□□□ -0.04
VAMP7-206ENST00000488344 KIF6Q6ZMV9 814 aa14.81□□□□□ -0.04
VAMP7-206ENST00000488344 PLEKHF1Q96S99 279 aa14.81□□□□□ -0.04
VAMP7-206ENST00000488344 KLRG2A4D1S0 409 aaPredicted RBP14.8□□□□□ -0.04
VAMP7-206ENST00000488344 ALDH1B1P30837 517 aa14.8□□□□□ -0.04
VAMP7-206ENST00000488344 PRELPP51888 382 aa14.8□□□□□ -0.04
VAMP7-206ENST00000488344 EIF4A1P60842 406 aaKnown RBP14.8□□□□□ -0.04
VAMP7-206ENST00000488344 IFFO2Q5TF58 517 aa14.8□□□□□ -0.04
VAMP7-206ENST00000488344 ERBB4Q15303 1308 aa14.8□□□□□ -0.04
VAMP7-206ENST00000488344 DNAJC5GQ8N7S2 189 aa14.79□□□□□ -0.04
VAMP7-206ENST00000488344 MIS18AQ9NYP9 233 aa14.79□□□□□ -0.04
VAMP7-206ENST00000488344 IBTKQ9P2D0 1353 aaPredicted RBP14.78□□□□□ -0.04
VAMP7-206ENST00000488344 MAP3K15Q6ZN16 1313 aa14.78□□□□□ -0.04
VAMP7-206ENST00000488344 RTKN2Q8IZC4 609 aa14.78□□□□□ -0.04
VAMP7-206ENST00000488344 KLRG1Q96E93 195 aa14.78□□□□□ -0.04
VAMP7-206ENST00000488344 BABAM1Q9NWV8 329 aa14.78□□□□□ -0.04
VAMP7-206ENST00000488344 ANKRD31Q8N7Z5 1873 aa14.78□□□□□ -0.04
VAMP7-206ENST00000488344 COL11A2P13942 1736 aaPredicted RBP14.78□□□□□ -0.04
VAMP7-206ENST00000488344 IQCA1LA6NCM1 817 aa14.77□□□□□ -0.05
VAMP7-206ENST00000488344 FKBP4Q02790 459 aaKnown RBP eCLIP14.77□□□□□ -0.05
VAMP7-206ENST00000488344 TSPYL4Q9UJ04 414 aa14.77□□□□□ -0.05
VAMP7-206ENST00000488344 RRP7AQ9Y3A4 280 aaKnown RBP14.77□□□□□ -0.05
VAMP7-206ENST00000488344 SBF1O95248 1867 aa14.77□□□□□ -0.05
VAMP7-206ENST00000488344 TIAM2Q8IVF5 1701 aa14.77□□□□□ -0.05
VAMP7-206ENST00000488344 LAMB4A4D0S4 1761 aa14.76□□□□□ -0.05
VAMP7-206ENST00000488344 FAM177BA6PVY3 158 aa14.76□□□□□ -0.05
VAMP7-206ENST00000488344 HLFQ16534 295 aa14.76□□□□□ -0.05
VAMP7-206ENST00000488344 NGEFQ8N5V2 710 aa14.76□□□□□ -0.05
VAMP7-206ENST00000488344 WDR90Q96KV7 1748 aa14.75□□□□□ -0.05
VAMP7-206ENST00000488344 ZBTB22O15209 634 aa14.75□□□□□ -0.05
VAMP7-206ENST00000488344 RIPK4P57078 832 aa14.75□□□□□ -0.05
VAMP7-206ENST00000488344 GRIPAP1Q4V328 841 aa14.75□□□□□ -0.05
VAMP7-206ENST00000488344 CC2D2BQ6DHV5 1058 aa14.75□□□□□ -0.05
VAMP7-206ENST00000488344 C7orf43Q8WVR3 580 aa14.75□□□□□ -0.05
VAMP7-206ENST00000488344 THUMPD2Q9BTF0 503 aaKnown RBP14.75□□□□□ -0.05
VAMP7-206ENST00000488344 RIC1Q4ADV7 1423 aa14.75□□□□□ -0.05
VAMP7-206ENST00000488344 MYBBP1AQ9BQG0 1328 aaKnown RBP14.74□□□□□ -0.05
VAMP7-206ENST00000488344 MYL6BP14649 208 aa14.74□□□□□ -0.05
VAMP7-206ENST00000488344 PARP10Q53GL7 1025 aa14.74□□□□□ -0.05
VAMP7-206ENST00000488344 JMYQ8N9B5 988 aa14.74□□□□□ -0.05
VAMP7-206ENST00000488344 RPGRQ92834 1020 aaKnown RBP14.74□□□□□ -0.05
VAMP7-206ENST00000488344 KDM3BQ7LBC6 1761 aa14.73□□□□□ -0.05
VAMP7-206ENST00000488344 CRY2Q49AN0 593 aa14.73□□□□□ -0.05
VAMP7-206ENST00000488344 GIGYF2Q6Y7W6 1299 aaKnown RBP14.73□□□□□ -0.05
VAMP7-206ENST00000488344 PPP1R42Q7Z4L9 355 aa14.73□□□□□ -0.05
VAMP7-206ENST00000488344 L3MBTL3Q96JM7 780 aaPredicted RBP14.73□□□□□ -0.05
VAMP7-206ENST00000488344 FER1L6Q2WGJ9 1857 aa14.72□□□□□ -0.05
VAMP7-206ENST00000488344 POTECB2RU33 542 aa14.72□□□□□ -0.05
VAMP7-206ENST00000488344 DDNO94850 711 aaPredicted RBP14.72□□□□□ -0.05
VAMP7-206ENST00000488344 WDR43Q15061 677 aaKnown RBP eCLIP14.72□□□□□ -0.05
VAMP7-206ENST00000488344 CHADLQ6NUI6 762 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms