RNA–Protein interactions for RNA: ENST00000488193.5

TFAP2A-215, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-215ENST00000488193 C16orf71Q8IYS4 520 aaPredicted RBP18.01■□□□□ 0.47
TFAP2A-215ENST00000488193 SMARCA5O60264 1052 aaPredicted RBP18■□□□□ 0.47
TFAP2A-215ENST00000488193 TEX13AQ9BXU3 409 aaPredicted RBP18■□□□□ 0.47
TFAP2A-215ENST00000488193 AFDNP55196 1824 aaKnown RBP18■□□□□ 0.47
TFAP2A-215ENST00000488193 CYP19A1P11511 503 aaPredicted RBP17.99■□□□□ 0.47
TFAP2A-215ENST00000488193 MTX1Q13505 466 aa17.99■□□□□ 0.47
TFAP2A-215ENST00000488193 GCKRQ14397 625 aa17.99■□□□□ 0.47
TFAP2A-215ENST00000488193 C9orf78Q9NZ63 289 aaPredicted RBP17.99■□□□□ 0.47
TFAP2A-215ENST00000488193 EXOC6BQ9Y2D4 811 aa17.99■□□□□ 0.47
TFAP2A-215ENST00000488193 SEC24BO95487 1268 aa17.99■□□□□ 0.47
TFAP2A-215ENST00000488193 PLEKHM2Q8IWE5 1019 aa17.99■□□□□ 0.47
TFAP2A-215ENST00000488193 OTUD7AQ8TE49 926 aaPredicted RBP17.99■□□□□ 0.47
TFAP2A-215ENST00000488193 SUCLG2Q96I99 432 aa17.99■□□□□ 0.47
TFAP2A-215ENST00000488193 KCNQ2O43526 872 aa17.98■□□□□ 0.47
TFAP2A-215ENST00000488193 NEXNQ0ZGT2 675 aa17.97■□□□□ 0.47
TFAP2A-215ENST00000488193 AFF2P51816 1311 aa17.97■□□□□ 0.47
TFAP2A-215ENST00000488193 ATP5J2-PTCD1G3V325 749 aa17.97■□□□□ 0.47
TFAP2A-215ENST00000488193 APBB1O00213 710 aa17.97■□□□□ 0.47
TFAP2A-215ENST00000488193 ATRNO75882 1429 aa17.96■□□□□ 0.47
TFAP2A-215ENST00000488193 SRGAP3O43295 1099 aa17.96■□□□□ 0.47
TFAP2A-215ENST00000488193 STARD3NLO95772 234 aa17.96■□□□□ 0.47
TFAP2A-215ENST00000488193 CICQ96RK0 1608 aaPredicted RBP17.95■□□□□ 0.46
TFAP2A-215ENST00000488193 CASP7P55210 303 aa17.95■□□□□ 0.46
TFAP2A-215ENST00000488193 EPHA10Q5JZY3 1008 aa17.95■□□□□ 0.46
TFAP2A-215ENST00000488193 MEX3CQ5U5Q3 659 aaKnown RBP17.95■□□□□ 0.46
TFAP2A-215ENST00000488193 GJD4Q96KN9 370 aaPredicted RBP17.95■□□□□ 0.46
TFAP2A-215ENST00000488193 BMP2KLQ5H9B9 411 aa17.95■□□□□ 0.46
TFAP2A-215ENST00000488193 ZBTB3Q9H5J0 574 aa17.95■□□□□ 0.46
TFAP2A-215ENST00000488193 BICC1Q9H694 974 aaKnown RBP17.95■□□□□ 0.46
TFAP2A-215ENST00000488193 PTF1AQ7RTS3 328 aa17.94■□□□□ 0.46
TFAP2A-215ENST00000488193 JARID2Q92833 1246 aaPredicted RBP17.94■□□□□ 0.46
TFAP2A-215ENST00000488193 SALL3Q9BXA9 1300 aa17.94■□□□□ 0.46
TFAP2A-215ENST00000488193 ONECUT3O60422 494 aaPredicted RBP17.93■□□□□ 0.46
TFAP2A-215ENST00000488193 ZBTB1Q9Y2K1 713 aa17.93■□□□□ 0.46
TFAP2A-215ENST00000488193 RREB1Q92766 1687 aa17.92■□□□□ 0.46
TFAP2A-215ENST00000488193 GSPT1P15170 499 aaKnown RBP17.92■□□□□ 0.46
TFAP2A-215ENST00000488193 ITPK1Q13572 414 aa17.92■□□□□ 0.46
TFAP2A-215ENST00000488193 NOP58Q9Y2X3 529 aaKnown RBP17.92■□□□□ 0.46
TFAP2A-215ENST00000488193 COL15A1P39059 1388 aa17.92■□□□□ 0.46
TFAP2A-215ENST00000488193 MYH14Q7Z406 1995 aaKnown RBP17.92■□□□□ 0.46
TFAP2A-215ENST00000488193 ISCA1Q9BUE6 129 aa17.92■□□□□ 0.46
TFAP2A-215ENST00000488193 LRRCC1Q9C099 1032 aa17.92■□□□□ 0.46
TFAP2A-215ENST00000488193 PALLDQ8WX93 1383 aa17.91■□□□□ 0.46
TFAP2A-215ENST00000488193 LOC102724428A0A0B4J2F2 783 aa17.91■□□□□ 0.46
TFAP2A-215ENST00000488193 H7C1W4 665 aa17.91■□□□□ 0.46
TFAP2A-215ENST00000488193 SURF6O75683 361 aaKnown RBP17.91■□□□□ 0.46
TFAP2A-215ENST00000488193 SIK1P57059 783 aa17.91■□□□□ 0.46
TFAP2A-215ENST00000488193 INTS5Q6P9B9 1019 aaKnown RBP17.91■□□□□ 0.46
TFAP2A-215ENST00000488193 A0A0G2JS52 829 aa17.9■□□□□ 0.46
TFAP2A-215ENST00000488193 HDAC5Q9UQL6 1122 aa17.9■□□□□ 0.46
TFAP2A-215ENST00000488193 A0A087WZG4 1122 aa17.9■□□□□ 0.46
TFAP2A-215ENST00000488193 UBE3BQ7Z3V4 1068 aa17.9■□□□□ 0.46
TFAP2A-215ENST00000488193 RAB11FIP3O75154 756 aa17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 ATP6V1AP38606 617 aa17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 TCIRG1Q13488 830 aa17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 FAM182BQ5T319 152 aa17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 TTC22Q5TAA0 569 aa17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 NPM2Q86SE8 214 aaKnown RBP17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 BCL11AQ9H165 835 aa17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 OSBPL3Q9H4L5 887 aa17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 TRPC5Q9UL62 973 aaPredicted RBP17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 PA2G4Q9UQ80 394 aaKnown RBP17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 ZNF330Q9Y3S2 320 aaPredicted RBP17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 MAP3K15Q6ZN16 1313 aa17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 ZNF831Q5JPB2 1677 aa17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 COL5A3P25940 1745 aaPredicted RBP17.89■□□□□ 0.45
TFAP2A-215ENST00000488193 TRIM28Q13263 835 aaKnown RBP17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 HLFQ16534 295 aa17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 RABL6Q3YEC7 729 aaPredicted RBP17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 CWC25Q9NXE8 425 aaPredicted RBP17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 TUBGCP6Q96RT7 1819 aa17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 NHSQ6T4R5 1651 aa17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 MSH5O43196 834 aa17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 IL6STP40189 918 aaPredicted RBP17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 PDE1AP54750 535 aa17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 MYT1Q01538 1121 aa17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 CCDC191Q8NCU4 936 aa17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 RHPN1Q8TCX5 695 aa17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 ZBTB47Q9UFB7 747 aaPredicted RBP17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 BTAF1O14981 1849 aa17.88■□□□□ 0.45
TFAP2A-215ENST00000488193 RFX5P48382 616 aaPredicted RBP17.87■□□□□ 0.45
TFAP2A-215ENST00000488193 EIF5P55010 431 aaKnown RBP17.87■□□□□ 0.45
TFAP2A-215ENST00000488193 SMARCC1Q92922 1105 aaPredicted RBP17.87■□□□□ 0.45
TFAP2A-215ENST00000488193 IL1RAPL2Q9NP60 686 aa17.87■□□□□ 0.45
TFAP2A-215ENST00000488193 SBF2Q86WG5 1849 aa17.87■□□□□ 0.45
TFAP2A-215ENST00000488193 CRKLP46109 303 aaKnown RBP17.86■□□□□ 0.45
TFAP2A-215ENST00000488193 FOXO4P98177 505 aa17.86■□□□□ 0.45
TFAP2A-215ENST00000488193 CCDC87Q9NVE4 849 aa17.86■□□□□ 0.45
TFAP2A-215ENST00000488193 NUP98P52948 1817 aa17.86■□□□□ 0.45
TFAP2A-215ENST00000488193 GIGYF2Q6Y7W6 1299 aaKnown RBP17.86■□□□□ 0.45
TFAP2A-215ENST00000488193 KIF6Q6ZMV9 814 aa17.86■□□□□ 0.45
TFAP2A-215ENST00000488193 STAP2Q9UGK3 403 aa17.86■□□□□ 0.45
TFAP2A-215ENST00000488193 ANKRD36CQ5JPF3 1778 aa17.85■□□□□ 0.45
TFAP2A-215ENST00000488193 SEPT12Q8IYM1 358 aa17.85■□□□□ 0.45
TFAP2A-215ENST00000488193 KIF1BPQ96EK5 621 aa17.85■□□□□ 0.45
TFAP2A-215ENST00000488193 QTRT2Q9H974 415 aaKnown RBP17.85■□□□□ 0.45
TFAP2A-215ENST00000488193 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.85■□□□□ 0.45
TFAP2A-215ENST00000488193 ANP32AP39687 249 aaKnown RBP17.84■□□□□ 0.45
TFAP2A-215ENST00000488193 TSHZ3Q63HK5 1081 aa17.84■□□□□ 0.45
TFAP2A-215ENST00000488193 KLHDC4Q8TBB5 520 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms