RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 IL6STP40189 918 aaPredicted RBP10.05□□□□□ -0.8
ZNF541-204ENST00000487275 ITPK1Q13572 414 aa10.05□□□□□ -0.8
ZNF541-204ENST00000487275 CWF19L2Q2TBE0 894 aaKnown RBP10.05□□□□□ -0.8
ZNF541-204ENST00000487275 CEP85Q6P2H3 762 aa10.05□□□□□ -0.8
ZNF541-204ENST00000487275 BCL11BQ9C0K0 894 aaPredicted RBP10.05□□□□□ -0.8
ZNF541-204ENST00000487275 ZBTB3Q9H5J0 574 aa10.05□□□□□ -0.8
ZNF541-204ENST00000487275 CCDC87Q9NVE4 849 aa10.05□□□□□ -0.8
ZNF541-204ENST00000487275 TJP1Q07157 1748 aa10.04□□□□□ -0.8
ZNF541-204ENST00000487275 NEURL1BA8MQ27 555 aa10.04□□□□□ -0.8
ZNF541-204ENST00000487275 IGKV5-2P06315 115 aa10.04□□□□□ -0.8
ZNF541-204ENST00000487275 CRKLP46109 303 aaKnown RBP10.04□□□□□ -0.8
ZNF541-204ENST00000487275 PTF1AQ7RTS3 328 aa10.04□□□□□ -0.8
ZNF541-204ENST00000487275 GCC1Q96CN9 775 aa10.04□□□□□ -0.8
ZNF541-204ENST00000487275 LRRFIP2Q9Y608 721 aaKnown RBP10.04□□□□□ -0.8
ZNF541-204ENST00000487275 IBTKQ9P2D0 1353 aaPredicted RBP10.03□□□□□ -0.8
ZNF541-204ENST00000487275 ATP5J2-PTCD1G3V325 749 aa10.03□□□□□ -0.8
ZNF541-204ENST00000487275 GRM8O00222 908 aa10.03□□□□□ -0.8
ZNF541-204ENST00000487275 GCKRQ14397 625 aa10.03□□□□□ -0.8
ZNF541-204ENST00000487275 INTS5Q6P9B9 1019 aaKnown RBP10.03□□□□□ -0.8
ZNF541-204ENST00000487275 SIRT2Q8IXJ6 389 aa10.03□□□□□ -0.8
ZNF541-204ENST00000487275 SMC5Q8IY18 1101 aa10.03□□□□□ -0.8
ZNF541-204ENST00000487275 CCNL1Q9UK58 526 aaPredicted RBP10.03□□□□□ -0.8
ZNF541-204ENST00000487275 PDZRN3Q9UPQ7 1066 aa10.03□□□□□ -0.8
ZNF541-204ENST00000487275 MAP3K15Q6ZN16 1313 aa10.03□□□□□ -0.8
ZNF541-204ENST00000487275 BTAF1O14981 1849 aa10.03□□□□□ -0.8
ZNF541-204ENST00000487275 TRIM37O94972 964 aa10.02□□□□□ -0.81
ZNF541-204ENST00000487275 NBPF7P0C2Y1 421 aaPredicted RBP10.02□□□□□ -0.81
ZNF541-204ENST00000487275 EIF5P55010 431 aaKnown RBP10.02□□□□□ -0.81
ZNF541-204ENST00000487275 ATP8B2P98198 1209 aa10.02□□□□□ -0.81
ZNF541-204ENST00000487275 HSP90AB3PQ58FF7 597 aa10.02□□□□□ -0.81
ZNF541-204ENST00000487275 DZIP3Q86Y13 1208 aaKnown RBP10.02□□□□□ -0.81
ZNF541-204ENST00000487275 LINC00116Q8NCU8 138 aa10.02□□□□□ -0.81
ZNF541-204ENST00000487275 CWC25Q9NXE8 425 aaPredicted RBP10.02□□□□□ -0.81
ZNF541-204ENST00000487275 CICQ96RK0 1608 aaPredicted RBP10.02□□□□□ -0.81
ZNF541-204ENST00000487275 UTYO14607 1347 aa10.02□□□□□ -0.81
ZNF541-204ENST00000487275 CNTNAP4Q9C0A0 1308 aa10.02□□□□□ -0.81
ZNF541-204ENST00000487275 BRWD3Q6RI45 1802 aa10.01□□□□□ -0.81
ZNF541-204ENST00000487275 RGS3P49796 1198 aa10.01□□□□□ -0.81
ZNF541-204ENST00000487275 TCIRG1Q13488 830 aa10.01□□□□□ -0.81
ZNF541-204ENST00000487275 POTEAQ6S8J7 498 aa10.01□□□□□ -0.81
ZNF541-204ENST00000487275 SKAP1Q86WV1 359 aa10.01□□□□□ -0.81
ZNF541-204ENST00000487275 CCDC191Q8NCU4 936 aa10.01□□□□□ -0.81
ZNF541-204ENST00000487275 ZBTB47Q9UFB7 747 aaPredicted RBP10.01□□□□□ -0.81
ZNF541-204ENST00000487275 RGS17Q9UGC6 210 aaPredicted RBP10.01□□□□□ -0.81
ZNF541-204ENST00000487275 ARFGEF2Q9Y6D5 1785 aa10.01□□□□□ -0.81
ZNF541-204ENST00000487275 ZNF831Q5JPB2 1677 aa10□□□□□ -0.81
ZNF541-204ENST00000487275 A0A087WZG4 1122 aa10□□□□□ -0.81
ZNF541-204ENST00000487275 ERVV-1B6SEH8 477 aa10□□□□□ -0.81
ZNF541-204ENST00000487275 KCNQ4P56696 695 aa10□□□□□ -0.81
ZNF541-204ENST00000487275 RC3H1Q5TC82 1133 aaKnown RBP10□□□□□ -0.81
ZNF541-204ENST00000487275 ANKRD45Q5TZF3 282 aa10□□□□□ -0.81
ZNF541-204ENST00000487275 GIGYF2Q6Y7W6 1299 aaKnown RBP10□□□□□ -0.81
ZNF541-204ENST00000487275 SUCLG2Q96I99 432 aa10□□□□□ -0.81
ZNF541-204ENST00000487275 ISCA1Q9BUE6 129 aa10□□□□□ -0.81
ZNF541-204ENST00000487275 DCTPP1Q9H773 170 aa10□□□□□ -0.81
ZNF541-204ENST00000487275 TBC1D2BQ9UPU7 963 aa10□□□□□ -0.81
ZNF541-204ENST00000487275 SBF2Q86WG5 1849 aa10□□□□□ -0.81
ZNF541-204ENST00000487275 NUP188Q5SRE5 1749 aa9.99□□□□□ -0.81
ZNF541-204ENST00000487275 PNMA6EA0A0J9YXQ4 647 aa9.99□□□□□ -0.81
ZNF541-204ENST00000487275 SRGAP3O43295 1099 aa9.99□□□□□ -0.81
ZNF541-204ENST00000487275 HMGB2P26583 209 aaKnown RBP9.99□□□□□ -0.81
ZNF541-204ENST00000487275 NUCB1Q02818 461 aa9.99□□□□□ -0.81
ZNF541-204ENST00000487275 TRIM28Q13263 835 aaKnown RBP9.99□□□□□ -0.81
ZNF541-204ENST00000487275 HLFQ16534 295 aa9.99□□□□□ -0.81
ZNF541-204ENST00000487275 PPP1R42Q7Z4L9 355 aa9.99□□□□□ -0.81
ZNF541-204ENST00000487275 CHD1LQ86WJ1 897 aa9.99□□□□□ -0.81
ZNF541-204ENST00000487275 RREB1Q92766 1687 aa9.99□□□□□ -0.81
ZNF541-204ENST00000487275 COL15A1P39059 1388 aa9.99□□□□□ -0.81
ZNF541-204ENST00000487275 GNPATO15228 680 aa9.98□□□□□ -0.81
ZNF541-204ENST00000487275 RPS6KA4O75676 772 aa9.98□□□□□ -0.81
ZNF541-204ENST00000487275 MTX1Q13505 466 aa9.98□□□□□ -0.81
ZNF541-204ENST00000487275 SLC27A3Q5K4L6 730 aa9.98□□□□□ -0.81
ZNF541-204ENST00000487275 UBE3BQ7Z3V4 1068 aa9.98□□□□□ -0.81
ZNF541-204ENST00000487275 SSH3Q8TE77 659 aa9.98□□□□□ -0.81
ZNF541-204ENST00000487275 JARID2Q92833 1246 aaPredicted RBP9.98□□□□□ -0.81
ZNF541-204ENST00000487275 LNPKQ9C0E8 428 aa9.98□□□□□ -0.81
ZNF541-204ENST00000487275 BICC1Q9H694 974 aaKnown RBP9.98□□□□□ -0.81
ZNF541-204ENST00000487275 ZNF652Q9Y2D9 606 aa9.98□□□□□ -0.81
ZNF541-204ENST00000487275 COL5A3P25940 1745 aaPredicted RBP9.98□□□□□ -0.81
ZNF541-204ENST00000487275 AFDNP55196 1824 aaKnown RBP9.98□□□□□ -0.81
ZNF541-204ENST00000487275 LY75O60449 1722 aa9.97□□□□□ -0.81
ZNF541-204ENST00000487275 H7C1W4 665 aa9.97□□□□□ -0.81
ZNF541-204ENST00000487275 CAMTA2O94983 1202 aa9.97□□□□□ -0.81
ZNF541-204ENST00000487275 GPTP24298 496 aa9.97□□□□□ -0.81
ZNF541-204ENST00000487275 POLA2Q14181 598 aa9.97□□□□□ -0.81
ZNF541-204ENST00000487275 AK7Q96M32 723 aa9.97□□□□□ -0.81
ZNF541-204ENST00000487275 RTCBQ9Y3I0 505 aaKnown RBP9.97□□□□□ -0.81
ZNF541-204ENST00000487275 APBB1O00213 710 aa9.96□□□□□ -0.82
ZNF541-204ENST00000487275 SURF6O75683 361 aaKnown RBP9.96□□□□□ -0.82
ZNF541-204ENST00000487275 APBA3O96018 575 aa9.96□□□□□ -0.82
ZNF541-204ENST00000487275 PCCAP05165 728 aaPredicted RBP9.96□□□□□ -0.82
ZNF541-204ENST00000487275 CASP7P55210 303 aa9.96□□□□□ -0.82
ZNF541-204ENST00000487275 HSP90AB4PQ58FF6 505 aa9.96□□□□□ -0.82
ZNF541-204ENST00000487275 NLRP10Q86W26 655 aa9.96□□□□□ -0.82
ZNF541-204ENST00000487275 ZBTB38Q8NAP3 1195 aaPredicted RBP9.96□□□□□ -0.82
ZNF541-204ENST00000487275 KAZALD1Q96I82 304 aa9.96□□□□□ -0.82
ZNF541-204ENST00000487275 EXOC6BQ9Y2D4 811 aa9.96□□□□□ -0.82
ZNF541-204ENST00000487275 RGL2O15211 777 aa9.95□□□□□ -0.82
ZNF541-204ENST00000487275 RAB11FIP3O75154 756 aa9.95□□□□□ -0.82
ZNF541-204ENST00000487275 PDE4AP27815 886 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms