RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 TJP1Q07157 1748 aa10.81□□□□□ -0.68
NUDCD3-209ENST00000487118 ALDH1L1O75891 902 aa10.8□□□□□ -0.68
NUDCD3-209ENST00000487118 GNAI3P08754 354 aa10.8□□□□□ -0.68
NUDCD3-209ENST00000487118 RPAP2Q8IXW5 612 aaPredicted RBP10.8□□□□□ -0.68
NUDCD3-209ENST00000487118 XAGE3Q8WTP9 111 aa10.8□□□□□ -0.68
NUDCD3-209ENST00000487118 PDGFDQ9GZP0 370 aaPredicted RBP10.8□□□□□ -0.68
NUDCD3-209ENST00000487118 MAP3K2Q9Y2U5 619 aa10.8□□□□□ -0.68
NUDCD3-209ENST00000487118 CHD4Q14839 1912 aa10.8□□□□□ -0.68
NUDCD3-209ENST00000487118 ZNF831Q5JPB2 1677 aa10.79□□□□□ -0.68
NUDCD3-209ENST00000487118 GNAI2P04899 355 aa10.79□□□□□ -0.68
NUDCD3-209ENST00000487118 MYL6BP14649 208 aa10.79□□□□□ -0.68
NUDCD3-209ENST00000487118 CEP85Q6P2H3 762 aa10.79□□□□□ -0.68
NUDCD3-209ENST00000487118 COPS6Q7L5N1 327 aa10.79□□□□□ -0.68
NUDCD3-209ENST00000487118 DNAJC10Q8IXB1 793 aa10.79□□□□□ -0.68
NUDCD3-209ENST00000487118 SLC4A9Q96Q91 983 aa10.79□□□□□ -0.68
NUDCD3-209ENST00000487118 USP44Q9H0E7 712 aa10.79□□□□□ -0.68
NUDCD3-209ENST00000487118 UTRNP46939 3433 aa10.79□□□□□ -0.68
NUDCD3-209ENST00000487118 NHSQ6T4R5 1651 aa10.79□□□□□ -0.68
NUDCD3-209ENST00000487118 ARFGEF2Q9Y6D5 1785 aa10.78□□□□□ -0.68
NUDCD3-209ENST00000487118 A1BGP04217 495 aa10.78□□□□□ -0.68
NUDCD3-209ENST00000487118 AIMP1Q12904 312 aaKnown RBP10.78□□□□□ -0.68
NUDCD3-209ENST00000487118 GPR162Q16538 588 aa10.78□□□□□ -0.68
NUDCD3-209ENST00000487118 FAM196AQ6ZSG2 479 aa10.78□□□□□ -0.68
NUDCD3-209ENST00000487118 PTF1AQ7RTS3 328 aa10.78□□□□□ -0.68
NUDCD3-209ENST00000487118 LINS1Q8NG48 757 aa10.78□□□□□ -0.68
NUDCD3-209ENST00000487118 SYTL4Q96C24 671 aaPredicted RBP10.78□□□□□ -0.68
NUDCD3-209ENST00000487118 GCC1Q96CN9 775 aa10.78□□□□□ -0.68
NUDCD3-209ENST00000487118 ACSBG1Q96GR2 724 aa10.78□□□□□ -0.68
NUDCD3-209ENST00000487118 METTL22Q9BUU2 404 aaPredicted RBP10.78□□□□□ -0.68
NUDCD3-209ENST00000487118 PDZRN3Q9UPQ7 1066 aa10.78□□□□□ -0.68
NUDCD3-209ENST00000487118 UTYO14607 1347 aa10.78□□□□□ -0.68
NUDCD3-209ENST00000487118 STARD3NLO95772 234 aa10.77□□□□□ -0.69
NUDCD3-209ENST00000487118 CYP19A1P11511 503 aaPredicted RBP10.77□□□□□ -0.69
NUDCD3-209ENST00000487118 PIP4K2AP48426 406 aaPredicted RBP10.77□□□□□ -0.69
NUDCD3-209ENST00000487118 ANKRD13DQ6ZTN6 518 aa10.77□□□□□ -0.69
NUDCD3-209ENST00000487118 RIC3Q7Z5B4 369 aa10.77□□□□□ -0.69
NUDCD3-209ENST00000487118 SKAP1Q86WV1 359 aa10.77□□□□□ -0.69
NUDCD3-209ENST00000487118 PLBD2Q8NHP8 589 aa10.77□□□□□ -0.69
NUDCD3-209ENST00000487118 SMARCC1Q92922 1105 aaPredicted RBP10.77□□□□□ -0.69
NUDCD3-209ENST00000487118 RBM42Q9BTD8 480 aaKnown RBP10.77□□□□□ -0.69
NUDCD3-209ENST00000487118 TSHZ2Q9NRE2 1034 aa10.77□□□□□ -0.69
NUDCD3-209ENST00000487118 IGKV5-2P06315 115 aa10.76□□□□□ -0.69
NUDCD3-209ENST00000487118 UBTFL1P0CB47 393 aaPredicted RBP10.76□□□□□ -0.69
NUDCD3-209ENST00000487118 FHDC1Q9C0D6 1143 aaPredicted RBP10.76□□□□□ -0.69
NUDCD3-209ENST00000487118 DCTPP1Q9H773 170 aa10.76□□□□□ -0.69
NUDCD3-209ENST00000487118 PALLDQ8WX93 1383 aa10.76□□□□□ -0.69
NUDCD3-209ENST00000487118 NEURL1BA8MQ27 555 aa10.75□□□□□ -0.69
NUDCD3-209ENST00000487118 HMMRO75330 724 aa10.75□□□□□ -0.69
NUDCD3-209ENST00000487118 ATP8B2P98198 1209 aa10.75□□□□□ -0.69
NUDCD3-209ENST00000487118 NUCB1Q02818 461 aa10.75□□□□□ -0.69
NUDCD3-209ENST00000487118 NEXNQ0ZGT2 675 aa10.75□□□□□ -0.69
NUDCD3-209ENST00000487118 TTLL7Q6ZT98 887 aa10.75□□□□□ -0.69
NUDCD3-209ENST00000487118 SYT17Q9BSW7 474 aa10.75□□□□□ -0.69
NUDCD3-209ENST00000487118 ATF5Q9Y2D1 282 aaPredicted RBP10.75□□□□□ -0.69
NUDCD3-209ENST00000487118 LRRFIP2Q9Y608 721 aaKnown RBP10.75□□□□□ -0.69
NUDCD3-209ENST00000487118 KAT6BQ8WYB5 2073 aa10.75□□□□□ -0.69
NUDCD3-209ENST00000487118 CASZ1Q86V15 1759 aa10.75□□□□□ -0.69
NUDCD3-209ENST00000487118 LOC102724428A0A0B4J2F2 783 aa10.74□□□□□ -0.69
NUDCD3-209ENST00000487118 GRM8O00222 908 aa10.74□□□□□ -0.69
NUDCD3-209ENST00000487118 ZBTB7AO95365 584 aa10.74□□□□□ -0.69
NUDCD3-209ENST00000487118 NBPF7P0C2Y1 421 aaPredicted RBP10.74□□□□□ -0.69
NUDCD3-209ENST00000487118 SIK1P57059 783 aa10.74□□□□□ -0.69
NUDCD3-209ENST00000487118 CWF19L2Q2TBE0 894 aaKnown RBP10.74□□□□□ -0.69
NUDCD3-209ENST00000487118 ZNF526Q8TF50 670 aaPredicted RBP10.74□□□□□ -0.69
NUDCD3-209ENST00000487118 MYD88Q99836 296 aa10.74□□□□□ -0.69
NUDCD3-209ENST00000487118 HDAC5Q9UQL6 1122 aa10.74□□□□□ -0.69
NUDCD3-209ENST00000487118 COL5A3P25940 1745 aaPredicted RBP10.74□□□□□ -0.69
NUDCD3-209ENST00000487118 COL15A1P39059 1388 aa10.74□□□□□ -0.69
NUDCD3-209ENST00000487118 BTAF1O14981 1849 aa10.73□□□□□ -0.69
NUDCD3-209ENST00000487118 PDE4AP27815 886 aa10.73□□□□□ -0.69
NUDCD3-209ENST00000487118 IL6STP40189 918 aaPredicted RBP10.73□□□□□ -0.69
NUDCD3-209ENST00000487118 MTX1Q13505 466 aa10.73□□□□□ -0.69
NUDCD3-209ENST00000487118 GCKRQ14397 625 aa10.73□□□□□ -0.69
NUDCD3-209ENST00000487118 ANO8Q9HCE9 1232 aaPredicted RBP10.73□□□□□ -0.69
NUDCD3-209ENST00000487118 WWC3Q9ULE0 1092 aa10.73□□□□□ -0.69
NUDCD3-209ENST00000487118 ATP6V1AP38606 617 aa10.72□□□□□ -0.69
NUDCD3-209ENST00000487118 RGS3P49796 1198 aa10.72□□□□□ -0.69
NUDCD3-209ENST00000487118 ITPK1Q13572 414 aa10.72□□□□□ -0.69
NUDCD3-209ENST00000487118 POLA2Q14181 598 aa10.72□□□□□ -0.69
NUDCD3-209ENST00000487118 INTS5Q6P9B9 1019 aaKnown RBP10.72□□□□□ -0.69
NUDCD3-209ENST00000487118 CHD1LQ86WJ1 897 aa10.72□□□□□ -0.69
NUDCD3-209ENST00000487118 SSH3Q8TE77 659 aa10.72□□□□□ -0.69
NUDCD3-209ENST00000487118 C9orf78Q9NZ63 289 aaPredicted RBP10.72□□□□□ -0.69
NUDCD3-209ENST00000487118 ZBTB1Q9Y2K1 713 aa10.72□□□□□ -0.69
NUDCD3-209ENST00000487118 AFDNP55196 1824 aaKnown RBP10.72□□□□□ -0.69
NUDCD3-209ENST00000487118 PNMA6EA0A0J9YXQ4 647 aa10.71□□□□□ -0.69
NUDCD3-209ENST00000487118 EIF5P55010 431 aaKnown RBP10.71□□□□□ -0.69
NUDCD3-209ENST00000487118 CASP7P55210 303 aa10.71□□□□□ -0.69
NUDCD3-209ENST00000487118 KIF6Q6ZMV9 814 aa10.71□□□□□ -0.69
NUDCD3-209ENST00000487118 MAP3K15Q6ZN16 1313 aa10.71□□□□□ -0.69
NUDCD3-209ENST00000487118 PROM2Q8N271 834 aa10.71□□□□□ -0.69
NUDCD3-209ENST00000487118 KAZALD1Q96I82 304 aa10.71□□□□□ -0.69
NUDCD3-209ENST00000487118 ISCA1Q9BUE6 129 aa10.71□□□□□ -0.69
NUDCD3-209ENST00000487118 CCDC87Q9NVE4 849 aa10.71□□□□□ -0.69
NUDCD3-209ENST00000487118 LY75O60449 1722 aa10.7□□□□□ -0.7
NUDCD3-209ENST00000487118 CRKLP46109 303 aaKnown RBP10.7□□□□□ -0.7
NUDCD3-209ENST00000487118 TRIM28Q13263 835 aaKnown RBP10.7□□□□□ -0.7
NUDCD3-209ENST00000487118 TCIRG1Q13488 830 aa10.7□□□□□ -0.7
NUDCD3-209ENST00000487118 ANKRD45Q5TZF3 282 aa10.7□□□□□ -0.7
NUDCD3-209ENST00000487118 PPP1R42Q7Z4L9 355 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms