RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 CEP85Q6P2H3 762 aa11.92□□□□□ -0.5
POLR1A-208ENST00000486964 GJD4Q96KN9 370 aaPredicted RBP11.92□□□□□ -0.5
POLR1A-208ENST00000486964 SRCIN1Q9C0H9 1055 aa11.92□□□□□ -0.5
POLR1A-208ENST00000486964 CCDC9Q9Y3X0 531 aaKnown RBP11.92□□□□□ -0.5
POLR1A-208ENST00000486964 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.91□□□□□ -0.5
POLR1A-208ENST00000486964 PTCD1O75127 700 aaKnown RBP11.91□□□□□ -0.5
POLR1A-208ENST00000486964 COPS6Q7L5N1 327 aa11.91□□□□□ -0.5
POLR1A-208ENST00000486964 XAGE3Q8WTP9 111 aa11.91□□□□□ -0.5
POLR1A-208ENST00000486964 DCTPP1Q9H773 170 aa11.91□□□□□ -0.5
POLR1A-208ENST00000486964 C1orf115Q9H7X2 142 aa11.91□□□□□ -0.5
POLR1A-208ENST00000486964 MAP3K2Q9Y2U5 619 aa11.91□□□□□ -0.5
POLR1A-208ENST00000486964 UTYO14607 1347 aa11.91□□□□□ -0.5
POLR1A-208ENST00000486964 C5P01031 1676 aa11.91□□□□□ -0.5
POLR1A-208ENST00000486964 FRAT2O75474 233 aaPredicted RBP11.9□□□□□ -0.5
POLR1A-208ENST00000486964 DDX58O95786 925 aaKnown RBP11.9□□□□□ -0.5
POLR1A-208ENST00000486964 A1BGP04217 495 aa11.9□□□□□ -0.5
POLR1A-208ENST00000486964 GNAI2P04899 355 aa11.9□□□□□ -0.5
POLR1A-208ENST00000486964 ATP8B2P98198 1209 aa11.9□□□□□ -0.5
POLR1A-208ENST00000486964 NUCB1Q02818 461 aa11.9□□□□□ -0.5
POLR1A-208ENST00000486964 LINS1Q8NG48 757 aa11.9□□□□□ -0.5
POLR1A-208ENST00000486964 GCC1Q96CN9 775 aa11.9□□□□□ -0.5
POLR1A-208ENST00000486964 IGKV5-2P06315 115 aa11.89□□□□□ -0.51
POLR1A-208ENST00000486964 ANKRD13DQ6ZTN6 518 aa11.89□□□□□ -0.51
POLR1A-208ENST00000486964 DNAJC10Q8IXB1 793 aa11.89□□□□□ -0.51
POLR1A-208ENST00000486964 METTL22Q9BUU2 404 aaPredicted RBP11.89□□□□□ -0.51
POLR1A-208ENST00000486964 TRPC5Q9UL62 973 aaPredicted RBP11.89□□□□□ -0.51
POLR1A-208ENST00000486964 CYP19A1P11511 503 aaPredicted RBP11.88□□□□□ -0.51
POLR1A-208ENST00000486964 MYL6BP14649 208 aa11.88□□□□□ -0.51
POLR1A-208ENST00000486964 PLBD2Q8NHP8 589 aa11.88□□□□□ -0.51
POLR1A-208ENST00000486964 THSD7AQ9UPZ6 1657 aa11.88□□□□□ -0.51
POLR1A-208ENST00000486964 NBPF7P0C2Y1 421 aaPredicted RBP11.87□□□□□ -0.51
POLR1A-208ENST00000486964 AIMP1Q12904 312 aaKnown RBP11.87□□□□□ -0.51
POLR1A-208ENST00000486964 ANTXR1Q9H6X2 564 aa11.87□□□□□ -0.51
POLR1A-208ENST00000486964 KCNQ2O43526 872 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 STARD3NLO95772 234 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 PIP4K2AP48426 406 aaPredicted RBP11.86□□□□□ -0.51
POLR1A-208ENST00000486964 MTX1Q13505 466 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 RIC3Q7Z5B4 369 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 N4BP2Q86UW6 1770 aaPredicted RBP11.86□□□□□ -0.51
POLR1A-208ENST00000486964 IL27Q8NEV9 243 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 ITGB4P16144 1822 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 SEC24BO95487 1268 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 UBTFL1P0CB47 393 aaPredicted RBP11.86□□□□□ -0.51
POLR1A-208ENST00000486964 PTMSP20962 102 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 HOXD11P31277 338 aaPredicted RBP11.86□□□□□ -0.51
POLR1A-208ENST00000486964 POLA2Q14181 598 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 TTLL7Q6ZT98 887 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 CHD1LQ86WJ1 897 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 HSCBQ8IWL3 235 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 SSH3Q8TE77 659 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 SMARCC1Q92922 1105 aaPredicted RBP11.86□□□□□ -0.51
POLR1A-208ENST00000486964 ACSBG1Q96GR2 724 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 KAZALD1Q96I82 304 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
POLR1A-208ENST00000486964 C22orf23Q9BZE7 217 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 CHMP5Q9NZZ3 219 aa11.86□□□□□ -0.51
POLR1A-208ENST00000486964 COL15A1P39059 1388 aa11.85□□□□□ -0.51
POLR1A-208ENST00000486964 TRIM28Q13263 835 aaKnown RBP11.85□□□□□ -0.51
POLR1A-208ENST00000486964 GCKRQ14397 625 aa11.85□□□□□ -0.51
POLR1A-208ENST00000486964 CWF19L2Q2TBE0 894 aaKnown RBP11.85□□□□□ -0.51
POLR1A-208ENST00000486964 TBC1D2Q9BYX2 928 aa11.85□□□□□ -0.51
POLR1A-208ENST00000486964 ISY1Q9ULR0 285 aaKnown RBP11.85□□□□□ -0.51
POLR1A-208ENST00000486964 LRRFIP2Q9Y608 721 aaKnown RBP11.85□□□□□ -0.51
POLR1A-208ENST00000486964 LAMB4A4D0S4 1761 aa11.84□□□□□ -0.51
POLR1A-208ENST00000486964 BRWD3Q6RI45 1802 aa11.84□□□□□ -0.51
POLR1A-208ENST00000486964 LOC102724428A0A0B4J2F2 783 aa11.84□□□□□ -0.51
POLR1A-208ENST00000486964 PNMA6EA0A0J9YXQ4 647 aa11.84□□□□□ -0.51
POLR1A-208ENST00000486964 HMMRO75330 724 aa11.84□□□□□ -0.51
POLR1A-208ENST00000486964 CASP7P55210 303 aa11.84□□□□□ -0.51
POLR1A-208ENST00000486964 SIK1P57059 783 aa11.84□□□□□ -0.51
POLR1A-208ENST00000486964 INTS5Q6P9B9 1019 aaKnown RBP11.84□□□□□ -0.51
POLR1A-208ENST00000486964 FAM43AQ8N2R8 423 aa11.84□□□□□ -0.51
POLR1A-208ENST00000486964 SYTL4Q96C24 671 aaPredicted RBP11.84□□□□□ -0.51
POLR1A-208ENST00000486964 HDAC5Q9UQL6 1122 aa11.84□□□□□ -0.51
POLR1A-208ENST00000486964 DDX11L8A8MPP1 907 aa11.83□□□□□ -0.52
POLR1A-208ENST00000486964 GRM8O00222 908 aa11.83□□□□□ -0.52
POLR1A-208ENST00000486964 NEXNQ0ZGT2 675 aa11.83□□□□□ -0.52
POLR1A-208ENST00000486964 SEPT12Q8IYM1 358 aa11.83□□□□□ -0.52
POLR1A-208ENST00000486964 MYD88Q99836 296 aa11.83□□□□□ -0.52
POLR1A-208ENST00000486964 ISCA1Q9BUE6 129 aa11.83□□□□□ -0.52
POLR1A-208ENST00000486964 H7C1W4 665 aa11.82□□□□□ -0.52
POLR1A-208ENST00000486964 IL6STP40189 918 aaPredicted RBP11.82□□□□□ -0.52
POLR1A-208ENST00000486964 EIF5P55010 431 aaKnown RBP11.82□□□□□ -0.52
POLR1A-208ENST00000486964 ITPK1Q13572 414 aa11.82□□□□□ -0.52
POLR1A-208ENST00000486964 ANKRD45Q5TZF3 282 aa11.82□□□□□ -0.52
POLR1A-208ENST00000486964 PTF1AQ7RTS3 328 aa11.82□□□□□ -0.52
POLR1A-208ENST00000486964 CCDC125Q86Z20 511 aa11.82□□□□□ -0.52
POLR1A-208ENST00000486964 SLKQ9H2G2 1235 aaPredicted RBP11.82□□□□□ -0.52
POLR1A-208ENST00000486964 BRPF3Q9ULD4 1205 aa11.82□□□□□ -0.52
POLR1A-208ENST00000486964 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
POLR1A-208ENST00000486964 CICQ96RK0 1608 aaPredicted RBP11.82□□□□□ -0.52
POLR1A-208ENST00000486964 PALLDQ8WX93 1383 aa11.81□□□□□ -0.52
POLR1A-208ENST00000486964 DOT1LQ8TEK3 1739 aa11.81□□□□□ -0.52
POLR1A-208ENST00000486964 RBM25P49756 843 aaKnown RBP11.81□□□□□ -0.52
POLR1A-208ENST00000486964 TCIRG1Q13488 830 aa11.81□□□□□ -0.52
POLR1A-208ENST00000486964 BMP2KLQ5H9B9 411 aa11.81□□□□□ -0.52
POLR1A-208ENST00000486964 PPP1R42Q7Z4L9 355 aa11.81□□□□□ -0.52
POLR1A-208ENST00000486964 SNX21Q969T3 373 aa11.81□□□□□ -0.52
POLR1A-208ENST00000486964 C9orf78Q9NZ63 289 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms