RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 EAPPQ56P03 285 aaPredicted RBP20.8■□□□□ 0.92
PLXNB3-208ENST00000485980 LDHDQ86WU2 507 aa20.8■□□□□ 0.92
PLXNB3-208ENST00000485980 MASTLQ96GX5 879 aa20.8■□□□□ 0.92
PLXNB3-208ENST00000485980 KIF7Q2M1P5 1343 aa20.79■□□□□ 0.92
PLXNB3-208ENST00000485980 TAF1DQ9H5J8 278 aaPredicted RBP20.79■□□□□ 0.92
PLXNB3-208ENST00000485980 PRDM10Q9NQV6 1147 aa20.79■□□□□ 0.92
PLXNB3-208ENST00000485980 CLEC11AQ9Y240 323 aa20.79■□□□□ 0.92
PLXNB3-208ENST00000485980 TMEM88BA6NKF7 163 aa20.78■□□□□ 0.92
PLXNB3-208ENST00000485980 GNAT3A8MTJ3 354 aa20.78■□□□□ 0.92
PLXNB3-208ENST00000485980 CAMTA2O94983 1202 aa20.78■□□□□ 0.92
PLXNB3-208ENST00000485980 CTCFP49711 727 aaPredicted RBP20.78■□□□□ 0.92
PLXNB3-208ENST00000485980 VEGFBP49765 207 aa20.78■□□□□ 0.92
PLXNB3-208ENST00000485980 IL17REQ8NFR9 667 aa20.78■□□□□ 0.92
PLXNB3-208ENST00000485980 FMNL2Q96PY5 1086 aa20.78■□□□□ 0.92
PLXNB3-208ENST00000485980 PASKQ96RG2 1323 aa20.78■□□□□ 0.92
PLXNB3-208ENST00000485980 SCN7AQ01118 1682 aa20.77■□□□□ 0.92
PLXNB3-208ENST00000485980 DZIP3Q86Y13 1208 aaKnown RBP20.77■□□□□ 0.92
PLXNB3-208ENST00000485980 U2SURPO15042 1029 aaKnown RBP20.76■□□□□ 0.91
PLXNB3-208ENST00000485980 NBPF5PQ86XG9 351 aaPredicted RBP20.76■□□□□ 0.91
PLXNB3-208ENST00000485980 CCDC93Q567U6 631 aa20.75■□□□□ 0.91
PLXNB3-208ENST00000485980 CC2D1BQ5T0F9 858 aaKnown RBP20.75■□□□□ 0.91
PLXNB3-208ENST00000485980 GAS2L2Q8NHY3 880 aa20.75■□□□□ 0.91
PLXNB3-208ENST00000485980 L3MBTL3Q96JM7 780 aaPredicted RBP20.75■□□□□ 0.91
PLXNB3-208ENST00000485980 ITGBL1O95965 494 aaPredicted RBP20.74■□□□□ 0.91
PLXNB3-208ENST00000485980 PIP4K2AP48426 406 aaPredicted RBP20.74■□□□□ 0.91
PLXNB3-208ENST00000485980 CNGB1Q14028 1251 aaPredicted RBP20.74■□□□□ 0.91
PLXNB3-208ENST00000485980 ZNF277Q9NRM2 450 aaPredicted RBP20.74■□□□□ 0.91
PLXNB3-208ENST00000485980 HACL1Q9UJ83 578 aa20.74■□□□□ 0.91
PLXNB3-208ENST00000485980 SCN4AP35499 1836 aa20.74■□□□□ 0.91
PLXNB3-208ENST00000485980 LBX1P52954 281 aa20.73■□□□□ 0.91
PLXNB3-208ENST00000485980 C7orf43Q8WVR3 580 aa20.73■□□□□ 0.91
PLXNB3-208ENST00000485980 BTBD11A6QL63 1104 aa20.72■□□□□ 0.91
PLXNB3-208ENST00000485980 KCNQ3O43525 872 aa20.72■□□□□ 0.91
PLXNB3-208ENST00000485980 NPR1P16066 1061 aa20.72■□□□□ 0.91
PLXNB3-208ENST00000485980 FKBP4Q02790 459 aaKnown RBP eCLIP20.72■□□□□ 0.91
PLXNB3-208ENST00000485980 ZNF541Q9H0D2 1346 aa20.72■□□□□ 0.91
PLXNB3-208ENST00000485980 EPHX2P34913 555 aa20.71■□□□□ 0.91
PLXNB3-208ENST00000485980 OLFM4Q6UX06 510 aa20.71■□□□□ 0.91
PLXNB3-208ENST00000485980 WBP1LQ9NX94 342 aa20.71■□□□□ 0.91
PLXNB3-208ENST00000485980 USP16Q9Y5T5 823 aa20.71■□□□□ 0.91
PLXNB3-208ENST00000485980 ARFGEF2Q9Y6D5 1785 aa20.7■□□□□ 0.9
PLXNB3-208ENST00000485980 FAM177BA6PVY3 158 aa20.7■□□□□ 0.9
PLXNB3-208ENST00000485980 DEFB115Q30KQ5 88 aa20.7■□□□□ 0.9
PLXNB3-208ENST00000485980 ZNF652Q9Y2D9 606 aa20.7■□□□□ 0.9
PLXNB3-208ENST00000485980 MAP1SQ66K74 1059 aaPredicted RBP20.69■□□□□ 0.9
PLXNB3-208ENST00000485980 CLEC4GQ6UXB4 293 aa20.69■□□□□ 0.9
PLXNB3-208ENST00000485980 TPTE2Q6XPS3 522 aa20.69■□□□□ 0.9
PLXNB3-208ENST00000485980 PNMA8AQ86V59 439 aaPredicted RBP20.69■□□□□ 0.9
PLXNB3-208ENST00000485980 RTKN2Q8IZC4 609 aa20.69■□□□□ 0.9
PLXNB3-208ENST00000485980 CNTROBQ8N137 903 aa20.69■□□□□ 0.9
PLXNB3-208ENST00000485980 RNF123Q5XPI4 1314 aa20.69■□□□□ 0.9
PLXNB3-208ENST00000485980 SIPA1L3O60292 1781 aaPredicted RBP20.68■□□□□ 0.9
PLXNB3-208ENST00000485980 ABT1Q9ULW3 272 aaKnown RBP20.68■□□□□ 0.9
PLXNB3-208ENST00000485980 PRAMEF22A3QJZ6 481 aa20.67■□□□□ 0.9
PLXNB3-208ENST00000485980 SYNE4Q8N205 404 aa20.67■□□□□ 0.9
PLXNB3-208ENST00000485980 NIP7Q9Y221 180 aaKnown RBP eCLIP20.67■□□□□ 0.9
PLXNB3-208ENST00000485980 BCORQ6W2J9 1755 aa20.67■□□□□ 0.9
PLXNB3-208ENST00000485980 GTF2E1P29083 439 aaPredicted RBP20.66■□□□□ 0.9
PLXNB3-208ENST00000485980 IARSP41252 1262 aaKnown RBP20.66■□□□□ 0.9
PLXNB3-208ENST00000485980 WDR33Q9C0J8 1336 aaKnown RBP20.65■□□□□ 0.9
PLXNB3-208ENST00000485980 RASSF10A6NK89 507 aa20.65■□□□□ 0.9
PLXNB3-208ENST00000485980 PER1O15534 1290 aaPredicted RBP20.65■□□□□ 0.9
PLXNB3-208ENST00000485980 HSPA8P11142 646 aaKnown RBP20.65■□□□□ 0.9
PLXNB3-208ENST00000485980 ALDH1B1P30837 517 aa20.65■□□□□ 0.9
PLXNB3-208ENST00000485980 MAP2K1Q02750 393 aaPredicted RBP20.65■□□□□ 0.9
PLXNB3-208ENST00000485980 CEMIPQ8WUJ3 1361 aa20.64■□□□□ 0.89
PLXNB3-208ENST00000485980 KLRG2A4D1S0 409 aaPredicted RBP20.64■□□□□ 0.89
PLXNB3-208ENST00000485980 FZD9O00144 591 aa20.64■□□□□ 0.89
PLXNB3-208ENST00000485980 SNRPA1P09661 255 aaKnown RBP20.64■□□□□ 0.89
PLXNB3-208ENST00000485980 JDP2Q8WYK2 163 aa20.64■□□□□ 0.89
PLXNB3-208ENST00000485980 ABHD8Q96I13 439 aa20.64■□□□□ 0.89
PLXNB3-208ENST00000485980 PHACTR3Q96KR7 559 aa20.64■□□□□ 0.89
PLXNB3-208ENST00000485980 GJA3Q9Y6H8 435 aa20.64■□□□□ 0.89
PLXNB3-208ENST00000485980 PAXIP1Q6ZW49 1069 aaPredicted RBP20.63■□□□□ 0.89
PLXNB3-208ENST00000485980 GPC2Q8N158 579 aa20.63■□□□□ 0.89
PLXNB3-208ENST00000485980 PRKAR2BP31323 418 aa20.62■□□□□ 0.89
PLXNB3-208ENST00000485980 EIF6P56537 245 aaKnown RBP20.61■□□□□ 0.89
PLXNB3-208ENST00000485980 GRM1Q13255 1194 aa20.61■□□□□ 0.89
PLXNB3-208ENST00000485980 FAM161AQ3B820 660 aa20.61■□□□□ 0.89
PLXNB3-208ENST00000485980 RTF1Q92541 710 aaKnown RBP20.61■□□□□ 0.89
PLXNB3-208ENST00000485980 COL3A1P02461 1466 aaPredicted RBP20.61■□□□□ 0.89
PLXNB3-208ENST00000485980 ADAMTSL1Q8N6G6 1762 aa20.6■□□□□ 0.89
PLXNB3-208ENST00000485980 LMOD1P29536 600 aaPredicted RBP20.6■□□□□ 0.89
PLXNB3-208ENST00000485980 MCM10Q7L590 875 aa20.6■□□□□ 0.89
PLXNB3-208ENST00000485980 BEGAINQ9BUH8 593 aa20.6■□□□□ 0.89
PLXNB3-208ENST00000485980 DDX21Q9NR30 783 aaKnown RBP eCLIP20.6■□□□□ 0.89
PLXNB3-208ENST00000485980 NBPF26B4DH59 902 aa20.59■□□□□ 0.89
PLXNB3-208ENST00000485980 HLFQ16534 295 aa20.59■□□□□ 0.89
PLXNB3-208ENST00000485980 NBPF10Q6P3W6 841 aaKnown RBP20.59■□□□□ 0.89
PLXNB3-208ENST00000485980 NBPF15Q8N660 670 aa20.59■□□□□ 0.89
PLXNB3-208ENST00000485980 CCDC85CA6NKD9 419 aa20.58■□□□□ 0.89
PLXNB3-208ENST00000485980 PSMD1Q99460 953 aa20.58■□□□□ 0.89
PLXNB3-208ENST00000485980 FMR1Q06787 632 aaKnown RBP eCLIP20.57■□□□□ 0.88
PLXNB3-208ENST00000485980 NGEFQ8N5V2 710 aa20.57■□□□□ 0.88
PLXNB3-208ENST00000485980 CAPNS2Q96L46 248 aa20.57■□□□□ 0.88
PLXNB3-208ENST00000485980 RSPH6AQ9H0K4 717 aa20.57■□□□□ 0.88
PLXNB3-208ENST00000485980 ECE1P42892 770 aa20.56■□□□□ 0.88
PLXNB3-208ENST00000485980 NUTM1Q86Y26 1132 aa20.56■□□□□ 0.88
PLXNB3-208ENST00000485980 CFAP53Q96M91 514 aa20.56■□□□□ 0.88
PLXNB3-208ENST00000485980 TCERG1O14776 1098 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms