RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 SLC34A2O95436 690 aa14.23□□□□□ -0.13
HMGN1-215ENST00000485550 CCDC24Q8N4L8 307 aa14.23□□□□□ -0.13
HMGN1-215ENST00000485550 PRDM10Q9NQV6 1147 aa14.23□□□□□ -0.13
HMGN1-215ENST00000485550 UBR2Q8IWV8 1755 aa14.23□□□□□ -0.13
HMGN1-215ENST00000485550 SPDYE2BA6NHP3 402 aa14.22□□□□□ -0.13
HMGN1-215ENST00000485550 SPDYE6P0CI01 402 aa14.22□□□□□ -0.13
HMGN1-215ENST00000485550 CANXP27824 592 aaKnown RBP14.22□□□□□ -0.13
HMGN1-215ENST00000485550 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
HMGN1-215ENST00000485550 SCN7AQ01118 1682 aa14.21□□□□□ -0.13
HMGN1-215ENST00000485550 CTCFP49711 727 aaPredicted RBP14.21□□□□□ -0.13
HMGN1-215ENST00000485550 AIDAQ96BJ3 306 aa14.21□□□□□ -0.13
HMGN1-215ENST00000485550 VEGFBP49765 207 aa14.2□□□□□ -0.14
HMGN1-215ENST00000485550 LBX1P52954 281 aa14.2□□□□□ -0.14
HMGN1-215ENST00000485550 NPC1L1Q9UHC9 1359 aa14.2□□□□□ -0.14
HMGN1-215ENST00000485550 MRC1P22897 1456 aa14.19□□□□□ -0.14
HMGN1-215ENST00000485550 PASKQ96RG2 1323 aa14.19□□□□□ -0.14
HMGN1-215ENST00000485550 FXR2P51116 673 aaKnown RBP eCLIP14.19□□□□□ -0.14
HMGN1-215ENST00000485550 FAM161AQ3B820 660 aa14.19□□□□□ -0.14
HMGN1-215ENST00000485550 TBC1D9BQ66K14 1250 aa14.19□□□□□ -0.14
HMGN1-215ENST00000485550 IL17REQ8NFR9 667 aa14.19□□□□□ -0.14
HMGN1-215ENST00000485550 TAOK3Q9H2K8 898 aa14.19□□□□□ -0.14
HMGN1-215ENST00000485550 GNAT3A8MTJ3 354 aa14.17□□□□□ -0.14
HMGN1-215ENST00000485550 PRKAR2BP31323 418 aa14.17□□□□□ -0.14
HMGN1-215ENST00000485550 PDE6BP35913 854 aa14.17□□□□□ -0.14
HMGN1-215ENST00000485550 TEFQ10587 303 aa14.17□□□□□ -0.14
HMGN1-215ENST00000485550 PRR5LQ6MZQ0 368 aa14.17□□□□□ -0.14
HMGN1-215ENST00000485550 LDHDQ86WU2 507 aa14.17□□□□□ -0.14
HMGN1-215ENST00000485550 TTC5Q8N0Z6 440 aa14.17□□□□□ -0.14
HMGN1-215ENST00000485550 GAS2L2Q8NHY3 880 aa14.17□□□□□ -0.14
HMGN1-215ENST00000485550 PHACTR3Q96KR7 559 aa14.17□□□□□ -0.14
HMGN1-215ENST00000485550 CFAP53Q96M91 514 aa14.17□□□□□ -0.14
HMGN1-215ENST00000485550 BRIP1Q9BX63 1249 aa14.17□□□□□ -0.14
HMGN1-215ENST00000485550 ZNF330Q9Y3S2 320 aaPredicted RBP14.17□□□□□ -0.14
HMGN1-215ENST00000485550 BCORQ6W2J9 1755 aa14.17□□□□□ -0.14
HMGN1-215ENST00000485550 LTBP3Q9NS15 1303 aa14.16□□□□□ -0.14
HMGN1-215ENST00000485550 TMEM88BA6NKF7 163 aa14.16□□□□□ -0.14
HMGN1-215ENST00000485550 PPP2R1AP30153 589 aa14.16□□□□□ -0.14
HMGN1-215ENST00000485550 EIF5P55010 431 aaKnown RBP14.16□□□□□ -0.14
HMGN1-215ENST00000485550 EAPPQ56P03 285 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-215ENST00000485550 ABHD8Q96I13 439 aa14.16□□□□□ -0.14
HMGN1-215ENST00000485550 TAF1DQ9H5J8 278 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-215ENST00000485550 WBP1LQ9NX94 342 aa14.16□□□□□ -0.14
HMGN1-215ENST00000485550 ADAMTSL1Q8N6G6 1762 aa14.16□□□□□ -0.14
HMGN1-215ENST00000485550 COL3A1P02461 1466 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-215ENST00000485550 IQCA1LA6NCM1 817 aa14.15□□□□□ -0.14
HMGN1-215ENST00000485550 U2AF1L5P0DN76 240 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-215ENST00000485550 U2AF1Q01081 240 aaKnown RBP eCLIP14.15□□□□□ -0.141e-13■■■■■ 38.5
HMGN1-215ENST00000485550 VSIG10Q8N0Z9 540 aa14.15□□□□□ -0.14
HMGN1-215ENST00000485550 ZNF496Q96IT1 587 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-215ENST00000485550 PDZRN3Q9UPQ7 1066 aa14.15□□□□□ -0.14
HMGN1-215ENST00000485550 TBC1D2BQ9UPU7 963 aa14.15□□□□□ -0.14
HMGN1-215ENST00000485550 NUDCQ9Y266 331 aa14.15□□□□□ -0.14
HMGN1-215ENST00000485550 TRPM7Q96QT4 1865 aa14.14□□□□□ -0.15
HMGN1-215ENST00000485550 SIPA1L3O60292 1781 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-215ENST00000485550 NPHP1O15259 732 aa14.14□□□□□ -0.15
HMGN1-215ENST00000485550 ITGBL1O95965 494 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-215ENST00000485550 HSPA8P11142 646 aaKnown RBP14.14□□□□□ -0.15
HMGN1-215ENST00000485550 PRPF40BQ6NWY9 871 aaKnown RBP14.14□□□□□ -0.15
HMGN1-215ENST00000485550 ZNF790Q6PG37 636 aa14.14□□□□□ -0.15
HMGN1-215ENST00000485550 RSPH6AQ9H0K4 717 aa14.14□□□□□ -0.15
HMGN1-215ENST00000485550 CLEC11AQ9Y240 323 aa14.14□□□□□ -0.15
HMGN1-215ENST00000485550 CASP8AP2Q9UKL3 1982 aa14.14□□□□□ -0.15
HMGN1-215ENST00000485550 A0A087WZG4 1122 aa14.13□□□□□ -0.15
HMGN1-215ENST00000485550 KCNQ3O43525 872 aa14.13□□□□□ -0.15
HMGN1-215ENST00000485550 STARD3NLO95772 234 aa14.13□□□□□ -0.15
HMGN1-215ENST00000485550 SP7Q8TDD2 431 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-215ENST00000485550 CNKSR1Q969H4 720 aa14.13□□□□□ -0.15
HMGN1-215ENST00000485550 L3MBTL3Q96JM7 780 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-215ENST00000485550 ZNF541Q9H0D2 1346 aa14.13□□□□□ -0.15
HMGN1-215ENST00000485550 DEFB115Q30KQ5 88 aa14.12□□□□□ -0.15
HMGN1-215ENST00000485550 CNBD1Q8NA66 436 aa14.12□□□□□ -0.15
HMGN1-215ENST00000485550 BTBD11A6QL63 1104 aa14.11□□□□□ -0.15
HMGN1-215ENST00000485550 SRGNP10124 158 aa14.11□□□□□ -0.15
HMGN1-215ENST00000485550 MAP1SQ66K74 1059 aaPredicted RBP14.11□□□□□ -0.15
HMGN1-215ENST00000485550 STYK1Q6J9G0 422 aa14.11□□□□□ -0.15
HMGN1-215ENST00000485550 MASTLQ96GX5 879 aa14.11□□□□□ -0.15
HMGN1-215ENST00000485550 SETDB2Q96T68 719 aa14.11□□□□□ -0.15
HMGN1-215ENST00000485550 HACL1Q9UJ83 578 aa14.11□□□□□ -0.15
HMGN1-215ENST00000485550 WDR33Q9C0J8 1336 aaKnown RBP14.11□□□□□ -0.15
HMGN1-215ENST00000485550 RASSF10A6NK89 507 aa14.1□□□□□ -0.15
HMGN1-215ENST00000485550 A1BGP04217 495 aa14.1□□□□□ -0.15
HMGN1-215ENST00000485550 EPHX2P34913 555 aa14.1□□□□□ -0.15
HMGN1-215ENST00000485550 ST5P78524 1137 aa14.1□□□□□ -0.15
HMGN1-215ENST00000485550 DCTN1Q14203 1278 aa14.1□□□□□ -0.15
HMGN1-215ENST00000485550 SOGA3Q5TF21 947 aa14.1□□□□□ -0.15
HMGN1-215ENST00000485550 MCM10Q7L590 875 aa14.1□□□□□ -0.15
HMGN1-215ENST00000485550 RTF1Q92541 710 aaKnown RBP14.1□□□□□ -0.15
HMGN1-215ENST00000485550 FMNL2Q96PY5 1086 aa14.1□□□□□ -0.15
HMGN1-215ENST00000485550 RNF123Q5XPI4 1314 aa14.1□□□□□ -0.15
HMGN1-215ENST00000485550 HEG1Q9ULI3 1381 aa14.09□□□□□ -0.15
HMGN1-215ENST00000485550 CCDC85CA6NKD9 419 aa14.09□□□□□ -0.15
HMGN1-215ENST00000485550 CCDC93Q567U6 631 aa14.09□□□□□ -0.15
HMGN1-215ENST00000485550 OLFM4Q6UX06 510 aa14.09□□□□□ -0.15
HMGN1-215ENST00000485550 CNTROBQ8N137 903 aa14.09□□□□□ -0.15
HMGN1-215ENST00000485550 TEX13AQ9BXU3 409 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-215ENST00000485550 ZNF277Q9NRM2 450 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-215ENST00000485550 ABT1Q9ULW3 272 aaKnown RBP14.09□□□□□ -0.15
HMGN1-215ENST00000485550 PRAMEF22A3QJZ6 481 aa14.08□□□□□ -0.16
HMGN1-215ENST00000485550 CAMTA2O94983 1202 aa14.08□□□□□ -0.16
HMGN1-215ENST00000485550 PIP4K2AP48426 406 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms