RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 NEURL1BA8MQ27 555 aa16.7■□□□□ 0.26
RXRB-205ENST00000483821 IL6STP40189 918 aaPredicted RBP16.7■□□□□ 0.26
RXRB-205ENST00000483821 PIP4K2AP48426 406 aaPredicted RBP16.7■□□□□ 0.26
RXRB-205ENST00000483821 RGS3P49796 1198 aa16.7■□□□□ 0.26
RXRB-205ENST00000483821 RBM6P78332 1123 aaKnown RBP16.7■□□□□ 0.26
RXRB-205ENST00000483821 CHD1LQ86WJ1 897 aa16.7■□□□□ 0.26
RXRB-205ENST00000483821 KCNQ2O43526 872 aa16.69■□□□□ 0.26
RXRB-205ENST00000483821 GCKRQ14397 625 aa16.69■□□□□ 0.26
RXRB-205ENST00000483821 HSP90AB3PQ58FF7 597 aa16.69■□□□□ 0.26
RXRB-205ENST00000483821 ANKRD45Q5TZF3 282 aa16.69■□□□□ 0.26
RXRB-205ENST00000483821 FBXO41Q8TF61 875 aa16.69■□□□□ 0.26
RXRB-205ENST00000483821 SLC4A9Q96Q91 983 aa16.69■□□□□ 0.26
RXRB-205ENST00000483821 CCDC87Q9NVE4 849 aa16.69■□□□□ 0.26
RXRB-205ENST00000483821 IGKV5-2P06315 115 aa16.68■□□□□ 0.26
RXRB-205ENST00000483821 NBPF7P0C2Y1 421 aaPredicted RBP16.68■□□□□ 0.26
RXRB-205ENST00000483821 CWF19L2Q2TBE0 894 aaKnown RBP16.68■□□□□ 0.26
RXRB-205ENST00000483821 FAM196AQ6ZSG2 479 aa16.68■□□□□ 0.26
RXRB-205ENST00000483821 HSP90AB4PQ58FF6 505 aa16.67■□□□□ 0.26
RXRB-205ENST00000483821 TTLL7Q6ZT98 887 aa16.67■□□□□ 0.26
RXRB-205ENST00000483821 CCDC191Q8NCU4 936 aa16.67■□□□□ 0.26
RXRB-205ENST00000483821 A0A087WZG4 1122 aa16.66■□□□□ 0.26
RXRB-205ENST00000483821 ERVV-1B6SEH8 477 aa16.66■□□□□ 0.26
RXRB-205ENST00000483821 TRIM28Q13263 835 aaKnown RBP16.66■□□□□ 0.26
RXRB-205ENST00000483821 MTX1Q13505 466 aa16.66■□□□□ 0.26
RXRB-205ENST00000483821 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
RXRB-205ENST00000483821 SSH3Q8TE77 659 aa16.66■□□□□ 0.26
RXRB-205ENST00000483821 BCL11BQ9C0K0 894 aaPredicted RBP16.66■□□□□ 0.26
RXRB-205ENST00000483821 TSHZ2Q9NRE2 1034 aa16.66■□□□□ 0.26
RXRB-205ENST00000483821 CWC25Q9NXE8 425 aaPredicted RBP16.66■□□□□ 0.26
RXRB-205ENST00000483821 ZNF330Q9Y3S2 320 aaPredicted RBP16.66■□□□□ 0.26
RXRB-205ENST00000483821 MAP3K15Q6ZN16 1313 aa16.66■□□□□ 0.26
RXRB-205ENST00000483821 RAB11FIP3O75154 756 aa16.65■□□□□ 0.26
RXRB-205ENST00000483821 CRKLP46109 303 aaKnown RBP16.65■□□□□ 0.26
RXRB-205ENST00000483821 TCIRG1Q13488 830 aa16.65■□□□□ 0.26
RXRB-205ENST00000483821 ARXQ96QS3 562 aa16.65■□□□□ 0.26
RXRB-205ENST00000483821 ZBTB3Q9H5J0 574 aa16.65■□□□□ 0.26
RXRB-205ENST00000483821 COL15A1P39059 1388 aa16.64■□□□□ 0.26
RXRB-205ENST00000483821 SRGAP3O43295 1099 aa16.64■□□□□ 0.25
RXRB-205ENST00000483821 POLA2Q14181 598 aa16.64■□□□□ 0.25
RXRB-205ENST00000483821 PPP1R42Q7Z4L9 355 aa16.64■□□□□ 0.25
RXRB-205ENST00000483821 ZBTB1Q9Y2K1 713 aa16.64■□□□□ 0.25
RXRB-205ENST00000483821 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
RXRB-205ENST00000483821 EIF5P55010 431 aaKnown RBP16.63■□□□□ 0.25
RXRB-205ENST00000483821 RC3H1Q5TC82 1133 aaKnown RBP16.63■□□□□ 0.25
RXRB-205ENST00000483821 INTS5Q6P9B9 1019 aaKnown RBP16.63■□□□□ 0.25
RXRB-205ENST00000483821 GIGYF2Q6Y7W6 1299 aaKnown RBP16.63■□□□□ 0.25
RXRB-205ENST00000483821 LNPKQ9C0E8 428 aa16.63■□□□□ 0.25
RXRB-205ENST00000483821 CICQ96RK0 1608 aaPredicted RBP16.63■□□□□ 0.25
RXRB-205ENST00000483821 ZNF831Q5JPB2 1677 aa16.62■□□□□ 0.25
RXRB-205ENST00000483821 H7C1W4 665 aa16.62■□□□□ 0.25
RXRB-205ENST00000483821 RXRBP28702 533 aa16.62■□□□□ 0.25
RXRB-205ENST00000483821 ITPK1Q13572 414 aa16.62■□□□□ 0.25
RXRB-205ENST00000483821 FAM161AQ3B820 660 aa16.62■□□□□ 0.25
RXRB-205ENST00000483821 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
RXRB-205ENST00000483821 ISCA1Q9BUE6 129 aa16.62■□□□□ 0.25
RXRB-205ENST00000483821 PNMA6EA0A0J9YXQ4 647 aa16.61■□□□□ 0.25
RXRB-205ENST00000483821 RGL2O15211 777 aa16.61■□□□□ 0.25
RXRB-205ENST00000483821 PDE4AP27815 886 aa16.61■□□□□ 0.25
RXRB-205ENST00000483821 LRRCC1Q9C099 1032 aa16.61■□□□□ 0.25
RXRB-205ENST00000483821 NHSQ6T4R5 1651 aa16.61■□□□□ 0.25
RXRB-205ENST00000483821 CNTNAP4Q9C0A0 1308 aa16.61■□□□□ 0.25
RXRB-205ENST00000483821 TJP1Q07157 1748 aa16.61■□□□□ 0.25
RXRB-205ENST00000483821 SURF6O75683 361 aaKnown RBP16.6■□□□□ 0.25
RXRB-205ENST00000483821 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
RXRB-205ENST00000483821 SKAP1Q86WV1 359 aa16.6■□□□□ 0.25
RXRB-205ENST00000483821 ERC1Q8IUD2 1116 aa16.6■□□□□ 0.25
RXRB-205ENST00000483821 SUCLG2Q96I99 432 aa16.6■□□□□ 0.25
RXRB-205ENST00000483821 CCNL1Q9UK58 526 aaPredicted RBP16.6■□□□□ 0.25
RXRB-205ENST00000483821 ARFGEF2Q9Y6D5 1785 aa16.59■□□□□ 0.25
RXRB-205ENST00000483821 BACH2Q9BYV9 841 aa16.59■□□□□ 0.25
RXRB-205ENST00000483821 ZNF652Q9Y2D9 606 aa16.59■□□□□ 0.25
RXRB-205ENST00000483821 NOP58Q9Y2X3 529 aaKnown RBP16.59■□□□□ 0.25
RXRB-205ENST00000483821 PCCAP05165 728 aaPredicted RBP16.58■□□□□ 0.24
RXRB-205ENST00000483821 HSP90B1P14625 803 aaKnown RBP16.58■□□□□ 0.24
RXRB-205ENST00000483821 FAM182BQ5T319 152 aa16.58■□□□□ 0.24
RXRB-205ENST00000483821 KIF1BPQ96EK5 621 aa16.58■□□□□ 0.24
RXRB-205ENST00000483821 BICC1Q9H694 974 aaKnown RBP16.58■□□□□ 0.24
RXRB-205ENST00000483821 EIF5BO60841 1220 aaKnown RBP16.57■□□□□ 0.24
RXRB-205ENST00000483821 OS9Q13438 667 aaPredicted RBP16.57■□□□□ 0.24
RXRB-205ENST00000483821 ZBTB38Q8NAP3 1195 aaPredicted RBP16.57■□□□□ 0.24
RXRB-205ENST00000483821 LINC00116Q8NCU8 138 aa16.57■□□□□ 0.24
RXRB-205ENST00000483821 TBC1D2BQ9UPU7 963 aa16.57■□□□□ 0.24
RXRB-205ENST00000483821 EXOC6BQ9Y2D4 811 aa16.57■□□□□ 0.24
RXRB-205ENST00000483821 RPS6KA4O75676 772 aa16.56■□□□□ 0.24
RXRB-205ENST00000483821 CASP7P55210 303 aa16.56■□□□□ 0.24
RXRB-205ENST00000483821 G3BP1Q13283 466 aaKnown RBP eCLIP16.56■□□□□ 0.24
RXRB-205ENST00000483821 RABL6Q3YEC7 729 aaPredicted RBP16.56■□□□□ 0.24
RXRB-205ENST00000483821 PARP10Q53GL7 1025 aa16.56■□□□□ 0.24
RXRB-205ENST00000483821 SLC27A3Q5K4L6 730 aa16.56■□□□□ 0.24
RXRB-205ENST00000483821 CLEC4GQ6UXB4 293 aa16.56■□□□□ 0.24
RXRB-205ENST00000483821 KAZALD1Q96I82 304 aa16.56■□□□□ 0.24
RXRB-205ENST00000483821 NUP188Q5SRE5 1749 aa16.56■□□□□ 0.24
RXRB-205ENST00000483821 APBB1O00213 710 aa16.55■□□□□ 0.24
RXRB-205ENST00000483821 BMP2KLQ5H9B9 411 aa16.55■□□□□ 0.24
RXRB-205ENST00000483821 PTF1AQ7RTS3 328 aa16.55■□□□□ 0.24
RXRB-205ENST00000483821 NLRP10Q86W26 655 aa16.55■□□□□ 0.24
RXRB-205ENST00000483821 RREB1Q92766 1687 aa16.55■□□□□ 0.24
RXRB-205ENST00000483821 BTAF1O14981 1849 aa16.54■□□□□ 0.24
RXRB-205ENST00000483821 CDHR2Q9BYE9 1310 aa16.54■□□□□ 0.24
RXRB-205ENST00000483821 HLFQ16534 295 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms