RNA–Protein interactions for RNA: ENST00000481606.1

TFE3-202, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-202ENST00000481606 CNBD1Q8NA66 436 aa7.46□□□□□ -1.22
TFE3-202ENST00000481606 ZNF496Q96IT1 587 aaPredicted RBP7.46□□□□□ -1.22
TFE3-202ENST00000481606 BRIP1Q9BX63 1249 aa7.46□□□□□ -1.22
TFE3-202ENST00000481606 TBC1D2BQ9UPU7 963 aa7.46□□□□□ -1.22
TFE3-202ENST00000481606 COL3A1P02461 1466 aaPredicted RBP7.46□□□□□ -1.22
TFE3-202ENST00000481606 CNTNAP1P78357 1384 aa7.46□□□□□ -1.22
TFE3-202ENST00000481606 FOXN1O15353 648 aa7.45□□□□□ -1.22
TFE3-202ENST00000481606 DIAPH1O60610 1272 aaKnown RBP7.45□□□□□ -1.22
TFE3-202ENST00000481606 IL6STP40189 918 aaPredicted RBP7.45□□□□□ -1.22
TFE3-202ENST00000481606 TEFQ10587 303 aa7.45□□□□□ -1.22
TFE3-202ENST00000481606 STYK1Q6J9G0 422 aa7.45□□□□□ -1.22
TFE3-202ENST00000481606 NPM2Q86SE8 214 aaKnown RBP7.45□□□□□ -1.22
TFE3-202ENST00000481606 CNKSR1Q969H4 720 aa7.45□□□□□ -1.22
TFE3-202ENST00000481606 RTN4Q9NQC3 1192 aaKnown RBP7.45□□□□□ -1.22
TFE3-202ENST00000481606 CLSPNQ9HAW4 1339 aa7.45□□□□□ -1.22
TFE3-202ENST00000481606 ADAMTSL1Q8N6G6 1762 aa7.44□□□□□ -1.22
TFE3-202ENST00000481606 IQCA1LA6NCM1 817 aa7.44□□□□□ -1.22
TFE3-202ENST00000481606 CAMTA2O94983 1202 aa7.44□□□□□ -1.22
TFE3-202ENST00000481606 SRGNP10124 158 aa7.44□□□□□ -1.22
TFE3-202ENST00000481606 SOGA3Q5TF21 947 aa7.44□□□□□ -1.22
TFE3-202ENST00000481606 ZNF790Q6PG37 636 aa7.44□□□□□ -1.22
TFE3-202ENST00000481606 LDHDQ86WU2 507 aa7.44□□□□□ -1.22
TFE3-202ENST00000481606 AIDAQ96BJ3 306 aa7.44□□□□□ -1.22
TFE3-202ENST00000481606 SETDB2Q96T68 719 aa7.44□□□□□ -1.22
TFE3-202ENST00000481606 PASKQ96RG2 1323 aa7.44□□□□□ -1.22
TFE3-202ENST00000481606 ZNF541Q9H0D2 1346 aa7.44□□□□□ -1.22
TFE3-202ENST00000481606 GNAT3A8MTJ3 354 aa7.43□□□□□ -1.22
TFE3-202ENST00000481606 U2SURPO15042 1029 aaKnown RBP7.43□□□□□ -1.22
TFE3-202ENST00000481606 A1BGP04217 495 aa7.43□□□□□ -1.22
TFE3-202ENST00000481606 PIP4K2AP48426 406 aaPredicted RBP7.43□□□□□ -1.22
TFE3-202ENST00000481606 CCDC93Q567U6 631 aa7.43□□□□□ -1.22
TFE3-202ENST00000481606 EAPPQ56P03 285 aaPredicted RBP7.43□□□□□ -1.22
TFE3-202ENST00000481606 CC2D1BQ5T0F9 858 aaKnown RBP7.43□□□□□ -1.22
TFE3-202ENST00000481606 DZIP3Q86Y13 1208 aaKnown RBP7.43□□□□□ -1.22
TFE3-202ENST00000481606 GAS2L2Q8NHY3 880 aa7.43□□□□□ -1.22
TFE3-202ENST00000481606 MASTLQ96GX5 879 aa7.43□□□□□ -1.22
TFE3-202ENST00000481606 L3MBTL3Q96JM7 780 aaPredicted RBP7.43□□□□□ -1.22
TFE3-202ENST00000481606 FMNL2Q96PY5 1086 aa7.43□□□□□ -1.22
TFE3-202ENST00000481606 TEX13AQ9BXU3 409 aaPredicted RBP7.43□□□□□ -1.22
TFE3-202ENST00000481606 PCGF6Q9BYE7 350 aa7.43□□□□□ -1.22
TFE3-202ENST00000481606 TAF1DQ9H5J8 278 aaPredicted RBP7.43□□□□□ -1.22
TFE3-202ENST00000481606 PRDM10Q9NQV6 1147 aa7.43□□□□□ -1.22
TFE3-202ENST00000481606 LAMB4A4D0S4 1761 aa7.42□□□□□ -1.22
TFE3-202ENST00000481606 TMEM88BA6NKF7 163 aa7.42□□□□□ -1.22
TFE3-202ENST00000481606 CTCFP49711 727 aaPredicted RBP7.42□□□□□ -1.22
TFE3-202ENST00000481606 VEGFBP49765 207 aa7.42□□□□□ -1.22
TFE3-202ENST00000481606 NBPF5PQ86XG9 351 aaPredicted RBP7.42□□□□□ -1.22
TFE3-202ENST00000481606 IL17REQ8NFR9 667 aa7.42□□□□□ -1.22
TFE3-202ENST00000481606 ZNF277Q9NRM2 450 aaPredicted RBP7.42□□□□□ -1.22
TFE3-202ENST00000481606 HACL1Q9UJ83 578 aa7.42□□□□□ -1.22
TFE3-202ENST00000481606 KIF7Q2M1P5 1343 aa7.42□□□□□ -1.22
TFE3-202ENST00000481606 CEMIPQ8WUJ3 1361 aa7.42□□□□□ -1.22
TFE3-202ENST00000481606 THSD7BQ9C0I4 1608 aa7.41□□□□□ -1.22
TFE3-202ENST00000481606 KCNQ3O43525 872 aa7.41□□□□□ -1.22
TFE3-202ENST00000481606 NPR1P16066 1061 aa7.41□□□□□ -1.22
TFE3-202ENST00000481606 LBX1P52954 281 aa7.41□□□□□ -1.22
TFE3-202ENST00000481606 FKBP4Q02790 459 aaKnown RBP eCLIP7.41□□□□□ -1.22
TFE3-202ENST00000481606 CNGB1Q14028 1251 aaPredicted RBP7.41□□□□□ -1.22
TFE3-202ENST00000481606 OLFM4Q6UX06 510 aa7.41□□□□□ -1.22
TFE3-202ENST00000481606 CLEC11AQ9Y240 323 aa7.41□□□□□ -1.22
TFE3-202ENST00000481606 ZNF652Q9Y2D9 606 aa7.41□□□□□ -1.22
TFE3-202ENST00000481606 RNF123Q5XPI4 1314 aa7.41□□□□□ -1.22
TFE3-202ENST00000481606 PRAMEF22A3QJZ6 481 aa7.4□□□□□ -1.22
TFE3-202ENST00000481606 FAM177BA6PVY3 158 aa7.4□□□□□ -1.22
TFE3-202ENST00000481606 BTBD11A6QL63 1104 aa7.4□□□□□ -1.22
TFE3-202ENST00000481606 ITGBL1O95965 494 aaPredicted RBP7.4□□□□□ -1.22
TFE3-202ENST00000481606 PRKAR2BP31323 418 aa7.4□□□□□ -1.22
TFE3-202ENST00000481606 EPHX2P34913 555 aa7.4□□□□□ -1.22
TFE3-202ENST00000481606 C7orf43Q8WVR3 580 aa7.4□□□□□ -1.22
TFE3-202ENST00000481606 LTBP1Q14766 1721 aa7.4□□□□□ -1.23
TFE3-202ENST00000481606 COL4A5P29400 1685 aa7.39□□□□□ -1.23
TFE3-202ENST00000481606 ABCC12Q96J65 1359 aa7.39□□□□□ -1.23
TFE3-202ENST00000481606 RASSF10A6NK89 507 aa7.39□□□□□ -1.23
TFE3-202ENST00000481606 HSPA8P11142 646 aaKnown RBP7.39□□□□□ -1.23
TFE3-202ENST00000481606 IARSP41252 1262 aaKnown RBP7.39□□□□□ -1.23
TFE3-202ENST00000481606 MAP1SQ66K74 1059 aaPredicted RBP7.39□□□□□ -1.23
TFE3-202ENST00000481606 WBP1LQ9NX94 342 aa7.39□□□□□ -1.23
TFE3-202ENST00000481606 ABT1Q9ULW3 272 aaKnown RBP7.39□□□□□ -1.23
TFE3-202ENST00000481606 NIP7Q9Y221 180 aaKnown RBP eCLIP7.39□□□□□ -1.23
TFE3-202ENST00000481606 USP16Q9Y5T5 823 aa7.39□□□□□ -1.23
TFE3-202ENST00000481606 SNED1Q8TER0 1413 aa7.38□□□□□ -1.23
TFE3-202ENST00000481606 NPC1L1Q9UHC9 1359 aa7.38□□□□□ -1.23
TFE3-202ENST00000481606 PER1O15534 1290 aaPredicted RBP7.38□□□□□ -1.23
TFE3-202ENST00000481606 SNRPA1P09661 255 aaKnown RBP7.38□□□□□ -1.23
TFE3-202ENST00000481606 CACNB1Q02641 598 aaPredicted RBP7.38□□□□□ -1.23
TFE3-202ENST00000481606 DEFB115Q30KQ5 88 aa7.38□□□□□ -1.23
TFE3-202ENST00000481606 FAM161AQ3B820 660 aa7.38□□□□□ -1.23
TFE3-202ENST00000481606 CLEC4GQ6UXB4 293 aa7.38□□□□□ -1.23
TFE3-202ENST00000481606 TPTE2Q6XPS3 522 aa7.38□□□□□ -1.23
TFE3-202ENST00000481606 PAXIP1Q6ZW49 1069 aaPredicted RBP7.38□□□□□ -1.23
TFE3-202ENST00000481606 PNMA8AQ86V59 439 aaPredicted RBP7.38□□□□□ -1.23
TFE3-202ENST00000481606 RTKN2Q8IZC4 609 aa7.38□□□□□ -1.23
TFE3-202ENST00000481606 CNTROBQ8N137 903 aa7.38□□□□□ -1.23
TFE3-202ENST00000481606 SYNE4Q8N205 404 aa7.38□□□□□ -1.23
TFE3-202ENST00000481606 ABHD8Q96I13 439 aa7.38□□□□□ -1.23
TFE3-202ENST00000481606 PHACTR3Q96KR7 559 aa7.38□□□□□ -1.23
TFE3-202ENST00000481606 SPINK5Q9NQ38 1064 aaPredicted RBP7.38□□□□□ -1.23
TFE3-202ENST00000481606 PCDH10Q9P2E7 1040 aa7.38□□□□□ -1.23
TFE3-202ENST00000481606 TRPM7Q96QT4 1865 aa7.38□□□□□ -1.23
TFE3-202ENST00000481606 WDR33Q9C0J8 1336 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms