RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 CYP27B1O15528 508 aa17.09■□□□□ 0.33
PHF3-204ENST00000481385 TATP17735 454 aaPredicted RBP17.09■□□□□ 0.33
PHF3-204ENST00000481385 HSP90AB4PQ58FF6 505 aa17.09■□□□□ 0.33
PHF3-204ENST00000481385 DDX49Q9Y6V7 483 aaKnown RBP17.09■□□□□ 0.33
PHF3-204ENST00000481385 UTYO14607 1347 aa17.09■□□□□ 0.33
PHF3-204ENST00000481385 CUL4AQ13619 759 aa17.09■□□□□ 0.33
PHF3-204ENST00000481385 CNTROBQ8N137 903 aa17.09■□□□□ 0.33
PHF3-204ENST00000481385 SPG7Q9UQ90 795 aa17.09■□□□□ 0.33
PHF3-204ENST00000481385 RAD50Q92878 1312 aa17.08■□□□□ 0.33
PHF3-204ENST00000481385 GOLGA6L22H0YM25 854 aa17.08■□□□□ 0.33
PHF3-204ENST00000481385 CSB-PGBD3P0DP91 1061 aa17.08■□□□□ 0.33
PHF3-204ENST00000481385 KLHL40Q2TBA0 621 aa17.08■□□□□ 0.33
PHF3-204ENST00000481385 SASH1O94885 1247 aa17.08■□□□□ 0.32
PHF3-204ENST00000481385 PTMSP20962 102 aa17.08■□□□□ 0.32
PHF3-204ENST00000481385 LRP10Q7Z4F1 713 aa17.08■□□□□ 0.32
PHF3-204ENST00000481385 RASEFQ8IZ41 740 aa17.08■□□□□ 0.32
PHF3-204ENST00000481385 KLHDC4Q8TBB5 520 aa17.08■□□□□ 0.32
PHF3-204ENST00000481385 XAGE3Q8WTP9 111 aa17.08■□□□□ 0.32
PHF3-204ENST00000481385 USP16Q9Y5T5 823 aa17.08■□□□□ 0.32
PHF3-204ENST00000481385 CLASRPQ8N2M8 674 aaKnown RBP17.07■□□□□ 0.32
PHF3-204ENST00000481385 TTC41PQ6P2S7 1318 aa17.07■□□□□ 0.32
PHF3-204ENST00000481385 COPS6Q7L5N1 327 aa17.07■□□□□ 0.32
PHF3-204ENST00000481385 RIC3Q7Z5B4 369 aa17.07■□□□□ 0.32
PHF3-204ENST00000481385 RRAGDQ9NQL2 400 aaPredicted RBP17.07■□□□□ 0.32
PHF3-204ENST00000481385 TLR7Q9NYK1 1049 aaKnown RBP17.07■□□□□ 0.32
PHF3-204ENST00000481385 SNX14Q9Y5W7 946 aa17.07■□□□□ 0.32
PHF3-204ENST00000481385 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
PHF3-204ENST00000481385 EPHA10Q5JZY3 1008 aa17.06■□□□□ 0.32
PHF3-204ENST00000481385 FAM43AQ8N2R8 423 aa17.06■□□□□ 0.32
PHF3-204ENST00000481385 JARID2Q92833 1246 aaPredicted RBP17.06■□□□□ 0.32
PHF3-204ENST00000481385 GLRX3O76003 335 aaKnown RBP17.06■□□□□ 0.32
PHF3-204ENST00000481385 DDX58O95786 925 aaKnown RBP17.06■□□□□ 0.32
PHF3-204ENST00000481385 AACSQ86V21 672 aa17.06■□□□□ 0.32
PHF3-204ENST00000481385 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
PHF3-204ENST00000481385 SIL1Q9H173 461 aa17.06■□□□□ 0.32
PHF3-204ENST00000481385 NEURL1BA8MQ27 555 aa17.06■□□□□ 0.32
PHF3-204ENST00000481385 MCM2P49736 904 aa17.06■□□□□ 0.32
PHF3-204ENST00000481385 EAF2Q96CJ1 260 aaPredicted RBP17.06■□□□□ 0.32
PHF3-204ENST00000481385 ECHDC1Q9NTX5 307 aa17.06■□□□□ 0.32
PHF3-204ENST00000481385 PRPF40AO75400 957 aaKnown RBP17.05■□□□□ 0.32
PHF3-204ENST00000481385 MYD88Q99836 296 aa17.05■□□□□ 0.32
PHF3-204ENST00000481385 DCCP43146 1447 aa17.05■□□□□ 0.32
PHF3-204ENST00000481385 HSPA2P54652 639 aa17.05■□□□□ 0.32
PHF3-204ENST00000481385 GPT2Q8TD30 523 aa17.05■□□□□ 0.32
PHF3-204ENST00000481385 LARP6Q9BRS8 491 aaKnown RBP17.05■□□□□ 0.32
PHF3-204ENST00000481385 IFIT2P09913 472 aaKnown RBP17.04■□□□□ 0.32
PHF3-204ENST00000481385 PTH1RQ03431 593 aa17.04■□□□□ 0.32
PHF3-204ENST00000481385 CCDC8Q9H0W5 538 aaPredicted RBP17.04■□□□□ 0.32
PHF3-204ENST00000481385 BRD1O95696 1058 aa17.04■□□□□ 0.32
PHF3-204ENST00000481385 CPA1P15085 419 aa17.04■□□□□ 0.32
PHF3-204ENST00000481385 GCKRQ14397 625 aa17.04■□□□□ 0.32
PHF3-204ENST00000481385 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.04■□□□□ 0.323e-11■■■■■ 30
PHF3-204ENST00000481385 SPATA31A3Q5VYP0 1347 aa17.03■□□□□ 0.32
PHF3-204ENST00000481385 MRC1P22897 1456 aa17.03■□□□□ 0.32
PHF3-204ENST00000481385 CAVIN1Q6NZI2 390 aaKnown RBP17.03■□□□□ 0.32
PHF3-204ENST00000481385 NSFL1CQ9UNZ2 370 aaKnown RBP17.03■□□□□ 0.32
PHF3-204ENST00000481385 EPB41L2O43491 1005 aaKnown RBP17.03■□□□□ 0.32
PHF3-204ENST00000481385 NCLP19338 710 aaKnown RBP17.03■□□□□ 0.32
PHF3-204ENST00000481385 LARP1Q6PKG0 1096 aaKnown RBP17.03■□□□□ 0.32
PHF3-204ENST00000481385 DCAF5Q96JK2 942 aa17.03■□□□□ 0.32
PHF3-204ENST00000481385 TTC14Q96N46 770 aa17.03■□□□□ 0.32
PHF3-204ENST00000481385 ISY1Q9ULR0 285 aaKnown RBP17.03■□□□□ 0.32
PHF3-204ENST00000481385 ERC1Q8IUD2 1116 aa17.02■□□□□ 0.32
PHF3-204ENST00000481385 METTL22Q9BUU2 404 aaPredicted RBP17.02■□□□□ 0.32
PHF3-204ENST00000481385 RBM27Q9P2N5 1060 aaKnown RBP17.02■□□□□ 0.32
PHF3-204ENST00000481385 GLI3P10071 1580 aa17.02■□□□□ 0.32
PHF3-204ENST00000481385 CADPS2Q86UW7 1296 aa17.02■□□□□ 0.31
PHF3-204ENST00000481385 INTS4Q96HW7 963 aaKnown RBP17.02■□□□□ 0.31
PHF3-204ENST00000481385 DIAPH3Q9NSV4 1193 aa17.01■□□□□ 0.31
PHF3-204ENST00000481385 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
PHF3-204ENST00000481385 SNRPA1P09661 255 aaKnown RBP17.01■□□□□ 0.31
PHF3-204ENST00000481385 DTNBO60941 627 aa17■□□□□ 0.31
PHF3-204ENST00000481385 G3BP1Q13283 466 aaKnown RBP eCLIP17■□□□□ 0.31
PHF3-204ENST00000481385 ZSCAN23Q3MJ62 389 aa17■□□□□ 0.31
PHF3-204ENST00000481385 ANKRD13DQ6ZTN6 518 aa17■□□□□ 0.31
PHF3-204ENST00000481385 TTC5Q8N0Z6 440 aa17■□□□□ 0.31
PHF3-204ENST00000481385 FAM227BQ96M60 508 aa17■□□□□ 0.31
PHF3-204ENST00000481385 ABCC6O95255 1503 aa17■□□□□ 0.31
PHF3-204ENST00000481385 AK2P54819 239 aa17■□□□□ 0.31
PHF3-204ENST00000481385 COL9A3Q14050 684 aaPredicted RBP17■□□□□ 0.31
PHF3-204ENST00000481385 ADCK5Q3MIX3 580 aa17■□□□□ 0.31
PHF3-204ENST00000481385 RUFY3Q7L099 469 aa17■□□□□ 0.31
PHF3-204ENST00000481385 NEXNQ0ZGT2 675 aa17■□□□□ 0.31
PHF3-204ENST00000481385 ATP5J2-PTCD1G3V325 749 aa16.99■□□□□ 0.31
PHF3-204ENST00000481385 PTCD1O75127 700 aaKnown RBP16.99■□□□□ 0.31
PHF3-204ENST00000481385 FOXD4L6Q3SYB3 417 aaPredicted RBP16.99■□□□□ 0.31
PHF3-204ENST00000481385 FOXD4L3Q6VB84 417 aaPredicted RBP16.99■□□□□ 0.31
PHF3-204ENST00000481385 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
PHF3-204ENST00000481385 LARGE1O95461 756 aa16.99■□□□□ 0.31
PHF3-204ENST00000481385 BRINP3Q76B58 766 aa16.99■□□□□ 0.31
PHF3-204ENST00000481385 EVI5LQ96CN4 794 aa16.99■□□□□ 0.31
PHF3-204ENST00000481385 FMNL2Q96PY5 1086 aa16.99■□□□□ 0.31
PHF3-204ENST00000481385 HDAC5Q9UQL6 1122 aa16.99■□□□□ 0.31
PHF3-204ENST00000481385 CPDO75976 1380 aa16.98■□□□□ 0.31
PHF3-204ENST00000481385 RPAP1Q9BWH6 1393 aaPredicted RBP16.98■□□□□ 0.31
PHF3-204ENST00000481385 CABP4P57796 275 aa16.98■□□□□ 0.31
PHF3-204ENST00000481385 PRPF40BQ6NWY9 871 aaKnown RBP16.98■□□□□ 0.31
PHF3-204ENST00000481385 DDX54Q8TDD1 881 aaKnown RBP16.98■□□□□ 0.31
PHF3-204ENST00000481385 GPATCH3Q96I76 525 aa16.98■□□□□ 0.31
PHF3-204ENST00000481385 BOLA2Q9H3K6 86 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms