RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 F6X3S4 739 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 CEBPZQ03701 1054 aaKnown RBP11.06□□□□□ -0.64
GARNL3-216ENST00000481242 CATIPQ7Z7H3 387 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 STK11IPQ8N1F8 1099 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 MBIPQ9NS73 344 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 DISP3Q9P2K9 1392 aa11.06□□□□□ -0.64
GARNL3-216ENST00000481242 SMTNL1A8MU46 457 aa11.05□□□□□ -0.64
GARNL3-216ENST00000481242 SSBP05455 408 aaKnown RBP eCLIP11.05□□□□□ -0.64
GARNL3-216ENST00000481242 ANKRD18AQ8IVF6 992 aa11.05□□□□□ -0.64
GARNL3-216ENST00000481242 BBXQ8WY36 941 aaPredicted RBP11.05□□□□□ -0.64
GARNL3-216ENST00000481242 HDAC9Q9UKV0 1011 aa11.05□□□□□ -0.64
GARNL3-216ENST00000481242 SLC12A7Q9Y666 1083 aa11.05□□□□□ -0.64
GARNL3-216ENST00000481242 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
GARNL3-216ENST00000481242 KCNA6P17658 529 aa11.05□□□□□ -0.64
GARNL3-216ENST00000481242 ASXL1Q8IXJ9 1541 aa11.05□□□□□ -0.64
GARNL3-216ENST00000481242 CAGE1Q8TC20 777 aa11.05□□□□□ -0.64
GARNL3-216ENST00000481242 TRIM27P14373 513 aa11.05□□□□□ -0.64
GARNL3-216ENST00000481242 TMEM266Q2M3C6 531 aa11.05□□□□□ -0.64
GARNL3-216ENST00000481242 MPHOSPH6Q99547 160 aaKnown RBP11.05□□□□□ -0.64
GARNL3-216ENST00000481242 RANBP6O60518 1105 aaKnown RBP11.05□□□□□ -0.64
GARNL3-216ENST00000481242 TPTE2Q6XPS3 522 aa11.05□□□□□ -0.64
GARNL3-216ENST00000481242 POLR3AO14802 1390 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-216ENST00000481242 GCP02774 474 aa11.04□□□□□ -0.64
GARNL3-216ENST00000481242 PYM1Q9BRP8 204 aaKnown RBP11.04□□□□□ -0.64
GARNL3-216ENST00000481242 CRNKL1Q9BZJ0 848 aaKnown RBP11.04□□□□□ -0.64
GARNL3-216ENST00000481242 BABAM1Q9NWV8 329 aa11.04□□□□□ -0.64
GARNL3-216ENST00000481242 ATP6V1AP38606 617 aa11.04□□□□□ -0.64
GARNL3-216ENST00000481242 KSR2Q6VAB6 950 aa11.04□□□□□ -0.64
GARNL3-216ENST00000481242 CCDC8Q9H0W5 538 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-216ENST00000481242 IL15P40933 162 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-216ENST00000481242 PRPF40BQ6NWY9 871 aaKnown RBP11.04□□□□□ -0.64
GARNL3-216ENST00000481242 DEF6Q9H4E7 631 aa11.04□□□□□ -0.64
GARNL3-216ENST00000481242 WDR62O43379 1518 aa11.04□□□□□ -0.64
GARNL3-216ENST00000481242 ERLIN2O94905 339 aa11.04□□□□□ -0.64
GARNL3-216ENST00000481242 POTEJP0CG39 1038 aa11.04□□□□□ -0.64
GARNL3-216ENST00000481242 CCDC96Q2M329 555 aa11.04□□□□□ -0.64
GARNL3-216ENST00000481242 TANGO6Q9C0B7 1094 aa11.04□□□□□ -0.64
GARNL3-216ENST00000481242 NUP62CLQ9H1M0 184 aa11.04□□□□□ -0.64
GARNL3-216ENST00000481242 SPINK5Q9NQ38 1064 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-216ENST00000481242 CWC15Q9P013 229 aaKnown RBP11.04□□□□□ -0.64
GARNL3-216ENST00000481242 CTTNBP2Q8WZ74 1663 aa11.03□□□□□ -0.64
GARNL3-216ENST00000481242 LMTK3Q96Q04 1460 aa11.03□□□□□ -0.64
GARNL3-216ENST00000481242 IFIT3O14879 490 aaKnown RBP11.03□□□□□ -0.64
GARNL3-216ENST00000481242 POLD1P28340 1107 aa11.03□□□□□ -0.64
GARNL3-216ENST00000481242 MCM4P33991 863 aa11.03□□□□□ -0.64
GARNL3-216ENST00000481242 TTLL12Q14166 644 aaPredicted RBP11.03□□□□□ -0.64
GARNL3-216ENST00000481242 ZNF622Q969S3 477 aaKnown RBP eCLIP11.03□□□□□ -0.64
GARNL3-216ENST00000481242 FGFR1OPO95684 399 aaKnown RBP11.03□□□□□ -0.64
GARNL3-216ENST00000481242 TMTC2Q8N394 836 aa11.03□□□□□ -0.64
GARNL3-216ENST00000481242 OGFOD1Q8N543 542 aa11.03□□□□□ -0.64
GARNL3-216ENST00000481242 RNF214Q8ND24 703 aa11.03□□□□□ -0.64
GARNL3-216ENST00000481242 LINS1Q8NG48 757 aa11.03□□□□□ -0.64
GARNL3-216ENST00000481242 C8orf76Q96K31 380 aa11.03□□□□□ -0.64
GARNL3-216ENST00000481242 C8orf37Q96NL8 207 aa11.03□□□□□ -0.64
GARNL3-216ENST00000481242 IP6K1Q92551 441 aa11.03□□□□□ -0.64
GARNL3-216ENST00000481242 FEZ1Q99689 392 aa11.03□□□□□ -0.64
GARNL3-216ENST00000481242 RTCBQ9Y3I0 505 aaKnown RBP11.03□□□□□ -0.64
GARNL3-216ENST00000481242 CCDC194A0A1B0GVG4 234 aa11.02□□□□□ -0.64
GARNL3-216ENST00000481242 BRPF1P55201 1214 aaPredicted RBP11.02□□□□□ -0.64
GARNL3-216ENST00000481242 BMP2KLQ5H9B9 411 aa11.02□□□□□ -0.64
GARNL3-216ENST00000481242 PCDH11XQ9BZA7 1347 aa11.02□□□□□ -0.64
GARNL3-216ENST00000481242 PCDH11YQ9BZA8 1340 aa11.02□□□□□ -0.64
GARNL3-216ENST00000481242 BAG4O95429 457 aaKnown RBP11.02□□□□□ -0.65
GARNL3-216ENST00000481242 LIMCH1Q9UPQ0 1083 aa11.02□□□□□ -0.65
GARNL3-216ENST00000481242 NEO1Q92859 1461 aa11.02□□□□□ -0.65
GARNL3-216ENST00000481242 PTPRKQ15262 1439 aa11.02□□□□□ -0.65
GARNL3-216ENST00000481242 ATP5J2-PTCD1G3V325 749 aa11.02□□□□□ -0.65
GARNL3-216ENST00000481242 EIF4A2Q14240 407 aaKnown RBP11.02□□□□□ -0.65
GARNL3-216ENST00000481242 XAGE3Q8WTP9 111 aa11.01□□□□□ -0.65
GARNL3-216ENST00000481242 UTP14AQ9BVJ6 771 aaKnown RBP11.01□□□□□ -0.65
GARNL3-216ENST00000481242 ARHGEF12Q9NZN5 1544 aa11.01□□□□□ -0.65
GARNL3-216ENST00000481242 GRM8O00222 908 aa11.01□□□□□ -0.65
GARNL3-216ENST00000481242 PLCG2P16885 1265 aa11.01□□□□□ -0.65
GARNL3-216ENST00000481242 COPS6Q7L5N1 327 aa11.01□□□□□ -0.65
GARNL3-216ENST00000481242 ARID3AQ99856 593 aa11.01□□□□□ -0.65
GARNL3-216ENST00000481242 GNAQP50148 359 aa11.01□□□□□ -0.65
GARNL3-216ENST00000481242 SSRP1Q08945 709 aaKnown RBP11.01□□□□□ -0.65
GARNL3-216ENST00000481242 POLKQ9UBT6 870 aa11.01□□□□□ -0.65
GARNL3-216ENST00000481242 GOLGA8AA7E2F4 631 aa11.01□□□□□ -0.65
GARNL3-216ENST00000481242 GOLGA8BA8MQT2 603 aa11.01□□□□□ -0.65
GARNL3-216ENST00000481242 EIF4G3O43432 1585 aaKnown RBP11.01□□□□□ -0.65
GARNL3-216ENST00000481242 ATP2B3Q16720 1220 aa11.01□□□□□ -0.65
GARNL3-216ENST00000481242 UPF3BQ9BZI7 483 aaKnown RBP11.01□□□□□ -0.65
GARNL3-216ENST00000481242 YTHDC2Q9H6S0 1430 aaKnown RBP11.01□□□□□ -0.65
GARNL3-216ENST00000481242 CETN2P41208 172 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 MFSD6Q6ZSS7 791 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 EYA3Q99504 573 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 ARHGEF10O15013 1369 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 CTAGE5O15320 804 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 NCOA7Q8NI08 942 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 CNNM2Q9H8M5 875 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 TSPY2A6NKD2 308 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 GOLIM4O00461 696 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 ZNF804AQ7Z570 1209 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 TSG101Q99816 390 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 ABCC1P33527 1531 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 RHPN1Q8TCX5 695 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 KRT23Q9C075 422 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 LRRC27Q9C0I9 530 aa11□□□□□ -0.65
GARNL3-216ENST00000481242 ANKRD2Q9GZV1 360 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms