RNA–Protein interactions for RNA: ENST00000480045.5

LRP8-209, Transcript of LDL receptor related protein 8, humanhuman

TSL 5

Gene LRP8, Length 3,231 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-209ENST00000480045 USP16Q9Y5T5 823 aa23.66■■□□□ 1.38
LRP8-209ENST00000480045 SURF6O75683 361 aaKnown RBP23.65■■□□□ 1.38
LRP8-209ENST00000480045 ME3Q16798 604 aa23.65■■□□□ 1.38
LRP8-209ENST00000480045 WAPLQ7Z5K2 1190 aa23.65■■□□□ 1.38
LRP8-209ENST00000480045 TSPYL4Q9UJ04 414 aa23.65■■□□□ 1.38
LRP8-209ENST00000480045 GNAI3P08754 354 aa23.65■■□□□ 1.38
LRP8-209ENST00000480045 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.65■■□□□ 1.38
LRP8-209ENST00000480045 CPSF1Q10570 1443 aaKnown RBP23.64■■□□□ 1.38
LRP8-209ENST00000480045 NR1I2O75469 434 aa23.64■■□□□ 1.38
LRP8-209ENST00000480045 TDRD7Q8NHU6 1098 aaKnown RBP23.64■■□□□ 1.38
LRP8-209ENST00000480045 ERO1AQ96HE7 468 aa23.64■■□□□ 1.38
LRP8-209ENST00000480045 STK31Q9BXU1 1019 aa23.64■■□□□ 1.38
LRP8-209ENST00000480045 CDC42BPGQ6DT37 1551 aa23.64■■□□□ 1.38
LRP8-209ENST00000480045 COG3Q96JB2 828 aa23.64■■□□□ 1.37
LRP8-209ENST00000480045 ZNF446Q9NWS9 450 aa23.64■■□□□ 1.37
LRP8-209ENST00000480045 HNRNPH2P55795 449 aaKnown RBP23.63■■□□□ 1.37
LRP8-209ENST00000480045 CYP46A1Q9Y6A2 500 aa23.63■■□□□ 1.37
LRP8-209ENST00000480045 CCDC171Q6TFL3 1326 aa23.63■■□□□ 1.37
LRP8-209ENST00000480045 ERCC6LQ2NKX8 1250 aa23.63■■□□□ 1.37
LRP8-209ENST00000480045 TCEANC2Q96MN5 208 aa23.63■■□□□ 1.37
LRP8-209ENST00000480045 SLU7O95391 586 aaKnown RBP23.63■■□□□ 1.37
LRP8-209ENST00000480045 FBXW7Q969H0 707 aa23.62■■□□□ 1.37
LRP8-209ENST00000480045 PDIA4P13667 645 aaKnown RBP23.62■■□□□ 1.37
LRP8-209ENST00000480045 SOX12O15370 315 aa23.61■■□□□ 1.37
LRP8-209ENST00000480045 ST3GAL1Q11201 340 aa23.61■■□□□ 1.37
LRP8-209ENST00000480045 CNTROBQ8N137 903 aa23.61■■□□□ 1.37
LRP8-209ENST00000480045 A0A087WWV3 80 aa23.61■■□□□ 1.37
LRP8-209ENST00000480045 CCDC69A6NI79 296 aa23.61■■□□□ 1.37
LRP8-209ENST00000480045 PTH1RQ03431 593 aa23.61■■□□□ 1.37
LRP8-209ENST00000480045 DDX19AQ9NUU7 478 aaKnown RBP23.61■■□□□ 1.37
LRP8-209ENST00000480045 POLR3GO15318 223 aaPredicted RBP23.6■■□□□ 1.37
LRP8-209ENST00000480045 CLSTN2Q9H4D0 955 aa23.6■■□□□ 1.37
LRP8-209ENST00000480045 SH2B1Q9NRF2 756 aaPredicted RBP23.6■■□□□ 1.37
LRP8-209ENST00000480045 FOXO3O43524 673 aa23.59■■□□□ 1.37
LRP8-209ENST00000480045 BMS1Q14692 1282 aaKnown RBP23.59■■□□□ 1.37
LRP8-209ENST00000480045 ZSCAN31Q96LW9 406 aaPredicted RBP23.59■■□□□ 1.37
LRP8-209ENST00000480045 BECN2A8MW95 431 aa23.59■■□□□ 1.37
LRP8-209ENST00000480045 CEBPZQ03701 1054 aaKnown RBP23.59■■□□□ 1.37
LRP8-209ENST00000480045 NYAP1Q6ZVC0 841 aa23.59■■□□□ 1.37
LRP8-209ENST00000480045 FLIIQ13045 1269 aa23.59■■□□□ 1.37
LRP8-209ENST00000480045 STK3Q13188 491 aa23.59■■□□□ 1.37
LRP8-209ENST00000480045 GORABQ5T7V8 394 aa23.59■■□□□ 1.37
LRP8-209ENST00000480045 TPCN1Q9ULQ1 816 aa23.59■■□□□ 1.37
LRP8-209ENST00000480045 VPS53Q5VIR6 699 aa23.58■■□□□ 1.37
LRP8-209ENST00000480045 CERS3Q8IU89 383 aa23.58■■□□□ 1.37
LRP8-209ENST00000480045 PI4K2BQ8TCG2 481 aa23.58■■□□□ 1.37
LRP8-209ENST00000480045 SCAND2PQ9GZW5 306 aaPredicted RBP23.58■■□□□ 1.37
LRP8-209ENST00000480045 NPHP3Q7Z494 1330 aa23.58■■□□□ 1.37
LRP8-209ENST00000480045 UBTFL1P0CB47 393 aaPredicted RBP23.58■■□□□ 1.37
LRP8-209ENST00000480045 KLHL34Q8N239 644 aa23.58■■□□□ 1.37
LRP8-209ENST00000480045 LEO1Q8WVC0 666 aaPredicted RBP23.58■■□□□ 1.37
LRP8-209ENST00000480045 NCKAP5LQ9HCH0 1330 aa23.58■■□□□ 1.36
LRP8-209ENST00000480045 MAP2P11137 1827 aaKnown RBP23.57■■□□□ 1.36
LRP8-209ENST00000480045 LRRN4CLQ8ND94 238 aa23.57■■□□□ 1.36
LRP8-209ENST00000480045 ASXL2Q76L83 1435 aa23.57■■□□□ 1.36
LRP8-209ENST00000480045 EPB41L2O43491 1005 aaKnown RBP23.57■■□□□ 1.36
LRP8-209ENST00000480045 CYP2C19P33261 490 aa23.57■■□□□ 1.36
LRP8-209ENST00000480045 EIF4A2Q14240 407 aaKnown RBP23.56■■□□□ 1.36
LRP8-209ENST00000480045 C11orf57Q6ZUT1 292 aaPredicted RBP23.56■■□□□ 1.36
LRP8-209ENST00000480045 NEK11Q8NG66 645 aa23.56■■□□□ 1.36
LRP8-209ENST00000480045 RHPN1Q8TCX5 695 aa23.56■■□□□ 1.36
LRP8-209ENST00000480045 FAM53CQ9NYF3 392 aa23.56■■□□□ 1.36
LRP8-209ENST00000480045 STAG3Q9UJ98 1225 aa23.56■■□□□ 1.36
LRP8-209ENST00000480045 ANKRD26Q9UPS8 1709 aa23.56■■□□□ 1.36
LRP8-209ENST00000480045 SOS1Q07889 1333 aaPredicted RBP23.56■■□□□ 1.36
LRP8-209ENST00000480045 HTATSF1O43719 755 aaKnown RBP23.56■■□□□ 1.36
LRP8-209ENST00000480045 RAB11FIP3O75154 756 aa23.56■■□□□ 1.36
LRP8-209ENST00000480045 COL9A3Q14050 684 aaPredicted RBP23.56■■□□□ 1.36
LRP8-209ENST00000480045 LARP1Q6PKG0 1096 aaKnown RBP23.56■■□□□ 1.36
LRP8-209ENST00000480045 CCAR2Q8N163 923 aaKnown RBP23.56■■□□□ 1.36
LRP8-209ENST00000480045 TULP2O00295 520 aa23.55■■□□□ 1.36
LRP8-209ENST00000480045 PPP1R42Q7Z4L9 355 aa23.55■■□□□ 1.36
LRP8-209ENST00000480045 KIF1BPQ96EK5 621 aa23.55■■□□□ 1.36
LRP8-209ENST00000480045 PTPRMP28827 1452 aa23.55■■□□□ 1.36
LRP8-209ENST00000480045 ELP1O95163 1332 aa23.55■■□□□ 1.36
LRP8-209ENST00000480045 DLG5Q8TDM6 1919 aa23.55■■□□□ 1.36
LRP8-209ENST00000480045 ERBB3P21860 1342 aa23.55■■□□□ 1.36
LRP8-209ENST00000480045 ZKSCAN1P17029 563 aaPredicted RBP23.54■■□□□ 1.36
LRP8-209ENST00000480045 CLCN6P51797 869 aa23.54■■□□□ 1.36
LRP8-209ENST00000480045 PGBD1Q96JS3 809 aa23.54■■□□□ 1.36
LRP8-209ENST00000480045 SYT10Q6XYQ8 523 aa23.54■■□□□ 1.36
LRP8-209ENST00000480045 PDCP20941 246 aa23.54■■□□□ 1.36
LRP8-209ENST00000480045 TNNT3P45378 269 aaPredicted RBP23.54■■□□□ 1.36
LRP8-209ENST00000480045 OS9Q13438 667 aaPredicted RBP23.54■■□□□ 1.36
LRP8-209ENST00000480045 ARHGAP29Q52LW3 1261 aa23.54■■□□□ 1.36
LRP8-209ENST00000480045 DDX11Q96FC9 970 aa23.54■■□□□ 1.36
LRP8-209ENST00000480045 NEMFO60524 1076 aa23.53■■□□□ 1.36
LRP8-209ENST00000480045 SNW1Q13573 536 aaKnown RBP23.53■■□□□ 1.36
LRP8-209ENST00000480045 ZSWIM6Q9HCJ5 1215 aa23.53■■□□□ 1.36
LRP8-209ENST00000480045 PPP6R1Q9UPN7 881 aa23.53■■□□□ 1.36
LRP8-209ENST00000480045 UHRF1BP1LA0JNW5 1464 aa23.53■■□□□ 1.36
LRP8-209ENST00000480045 SRGAP3O43295 1099 aa23.53■■□□□ 1.36
LRP8-209ENST00000480045 CCZ1BP86790 482 aa23.53■■□□□ 1.36
LRP8-209ENST00000480045 CCZ1P86791 482 aaPredicted RBP23.53■■□□□ 1.36
LRP8-209ENST00000480045 SLFNL1Q499Z3 407 aa23.53■■□□□ 1.36
LRP8-209ENST00000480045 USP44Q9H0E7 712 aa23.53■■□□□ 1.36
LRP8-209ENST00000480045 FHOD1Q9Y613 1164 aa23.53■■□□□ 1.36
LRP8-209ENST00000480045 AOX1Q06278 1338 aa23.53■■□□□ 1.36
LRP8-209ENST00000480045 RAD51AP2Q09MP3 1159 aa23.52■■□□□ 1.36
LRP8-209ENST00000480045 LMTK2Q8IWU2 1503 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms