RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 EXOC6BQ9Y2D4 811 aa12.17□□□□□ -0.46
RAD51B-208ENST00000479335 ITGB4P16144 1822 aa12.17□□□□□ -0.46
RAD51B-208ENST00000479335 AOX1Q06278 1338 aa12.16□□□□□ -0.46
RAD51B-208ENST00000479335 SALL3Q9BXA9 1300 aa12.16□□□□□ -0.46
RAD51B-208ENST00000479335 NBPF26B4DH59 902 aa12.16□□□□□ -0.46
RAD51B-208ENST00000479335 SMARCA5O60264 1052 aaPredicted RBP12.16□□□□□ -0.46
RAD51B-208ENST00000479335 PTCD1O75127 700 aaKnown RBP12.16□□□□□ -0.46
RAD51B-208ENST00000479335 CDC45O75419 566 aa12.16□□□□□ -0.46
RAD51B-208ENST00000479335 SURF6O75683 361 aaKnown RBP12.16□□□□□ -0.46
RAD51B-208ENST00000479335 PDE1AP54750 535 aa12.16□□□□□ -0.46
RAD51B-208ENST00000479335 NBPF14Q5TI25 921 aa12.16□□□□□ -0.46
RAD51B-208ENST00000479335 NBPF10Q6P3W6 841 aaKnown RBP12.16□□□□□ -0.46
RAD51B-208ENST00000479335 NBPF15Q8N660 670 aa12.16□□□□□ -0.46
RAD51B-208ENST00000479335 CERKQ8TCT0 537 aa12.16□□□□□ -0.46
RAD51B-208ENST00000479335 MYD88Q99836 296 aa12.16□□□□□ -0.46
RAD51B-208ENST00000479335 STARD3NLO95772 234 aa12.15□□□□□ -0.46
RAD51B-208ENST00000479335 GSPT1P15170 499 aaKnown RBP12.15□□□□□ -0.46
RAD51B-208ENST00000479335 DDB1Q16531 1140 aa12.15□□□□□ -0.46
RAD51B-208ENST00000479335 ATG3Q9NT62 314 aa12.15□□□□□ -0.46
RAD51B-208ENST00000479335 NUTM2BA6NNL0 878 aaPredicted RBP12.15□□□□□ -0.47
RAD51B-208ENST00000479335 NUTM2EB1AL46 878 aaPredicted RBP12.15□□□□□ -0.47
RAD51B-208ENST00000479335 ERC1Q8IUD2 1116 aa12.15□□□□□ -0.47
RAD51B-208ENST00000479335 NUTM2AQ8IVF1 878 aaPredicted RBP12.15□□□□□ -0.47
RAD51B-208ENST00000479335 C22orf23Q9BZE7 217 aa12.15□□□□□ -0.47
RAD51B-208ENST00000479335 DAXXQ9UER7 740 aaPredicted RBP12.15□□□□□ -0.47
RAD51B-208ENST00000479335 ASAP1Q9ULH1 1129 aa12.15□□□□□ -0.47
RAD51B-208ENST00000479335 ARFGEF2Q9Y6D5 1785 aa12.14□□□□□ -0.47
RAD51B-208ENST00000479335 APBB1O00213 710 aa12.14□□□□□ -0.47
RAD51B-208ENST00000479335 A1BGP04217 495 aa12.14□□□□□ -0.47
RAD51B-208ENST00000479335 RBM25P49756 843 aaKnown RBP12.14□□□□□ -0.47
RAD51B-208ENST00000479335 TBC1D9Q6ZT07 1266 aa12.14□□□□□ -0.47
RAD51B-208ENST00000479335 UNC5CLQ8IV45 518 aa12.14□□□□□ -0.47
RAD51B-208ENST00000479335 RHPN1Q8TCX5 695 aa12.14□□□□□ -0.47
RAD51B-208ENST00000479335 SUCLG2Q96I99 432 aa12.14□□□□□ -0.47
RAD51B-208ENST00000479335 SPATA31A6Q5VVP1 1343 aa12.13□□□□□ -0.47
RAD51B-208ENST00000479335 MX1P20591 662 aa12.13□□□□□ -0.47
RAD51B-208ENST00000479335 MFAP1P55081 439 aaKnown RBP12.13□□□□□ -0.47
RAD51B-208ENST00000479335 BECN1Q14457 450 aa12.13□□□□□ -0.47
RAD51B-208ENST00000479335 CASC1Q6TDU7 716 aa12.13□□□□□ -0.47
RAD51B-208ENST00000479335 OTUD7AQ8TE49 926 aaPredicted RBP12.13□□□□□ -0.47
RAD51B-208ENST00000479335 KAZALD1Q96I82 304 aa12.13□□□□□ -0.47
RAD51B-208ENST00000479335 SDSP20132 328 aa12.12□□□□□ -0.47
RAD51B-208ENST00000479335 TRIM28Q13263 835 aaKnown RBP12.12□□□□□ -0.47
RAD51B-208ENST00000479335 VPS72Q15906 364 aa12.12□□□□□ -0.47
RAD51B-208ENST00000479335 FNBP4Q8N3X1 1017 aaPredicted RBP12.12□□□□□ -0.47
RAD51B-208ENST00000479335 CCDC191Q8NCU4 936 aa12.12□□□□□ -0.47
RAD51B-208ENST00000479335 H7C1W4 665 aa12.11□□□□□ -0.47
RAD51B-208ENST00000479335 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
RAD51B-208ENST00000479335 RABL6Q3YEC7 729 aaPredicted RBP12.11□□□□□ -0.47
RAD51B-208ENST00000479335 TTLL7Q6ZT98 887 aa12.11□□□□□ -0.47
RAD51B-208ENST00000479335 BICC1Q9H694 974 aaKnown RBP12.11□□□□□ -0.47
RAD51B-208ENST00000479335 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
RAD51B-208ENST00000479335 AFDNP55196 1824 aaKnown RBP12.11□□□□□ -0.47
RAD51B-208ENST00000479335 PRIM1P49642 420 aaKnown RBP12.11□□□□□ -0.47
RAD51B-208ENST00000479335 CASP7P55210 303 aa12.11□□□□□ -0.47
RAD51B-208ENST00000479335 DNAJC10Q8IXB1 793 aa12.11□□□□□ -0.47
RAD51B-208ENST00000479335 NGLY1Q96IV0 654 aa12.11□□□□□ -0.47
RAD51B-208ENST00000479335 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
RAD51B-208ENST00000479335 CWC25Q9NXE8 425 aaPredicted RBP12.11□□□□□ -0.47
RAD51B-208ENST00000479335 USP42Q9H9J4 1324 aaKnown RBP12.1□□□□□ -0.47
RAD51B-208ENST00000479335 A0A087WZG4 1122 aa12.1□□□□□ -0.47
RAD51B-208ENST00000479335 CYP19A1P11511 503 aaPredicted RBP12.1□□□□□ -0.47
RAD51B-208ENST00000479335 G3BP1Q13283 466 aaKnown RBP eCLIP12.1□□□□□ -0.47
RAD51B-208ENST00000479335 CLASRPQ8N2M8 674 aaKnown RBP12.1□□□□□ -0.47
RAD51B-208ENST00000479335 MARCH10Q8NA82 808 aaPredicted RBP12.1□□□□□ -0.47
RAD51B-208ENST00000479335 ISCA1Q9BUE6 129 aa12.1□□□□□ -0.47
RAD51B-208ENST00000479335 COPRSQ9NQ92 184 aa12.1□□□□□ -0.47
RAD51B-208ENST00000479335 TTC41PQ6P2S7 1318 aa12.1□□□□□ -0.47
RAD51B-208ENST00000479335 BCL9LQ86UU0 1499 aa12.09□□□□□ -0.47
RAD51B-208ENST00000479335 OS9Q13438 667 aaPredicted RBP12.09□□□□□ -0.47
RAD51B-208ENST00000479335 TCIRG1Q13488 830 aa12.09□□□□□ -0.47
RAD51B-208ENST00000479335 ANP32EQ9BTT0 268 aa12.09□□□□□ -0.47
RAD51B-208ENST00000479335 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
RAD51B-208ENST00000479335 DOT1LQ8TEK3 1739 aa12.09□□□□□ -0.47
RAD51B-208ENST00000479335 ATP5J2-PTCD1G3V325 749 aa12.08□□□□□ -0.48
RAD51B-208ENST00000479335 HSP90AB3PQ58FF7 597 aa12.08□□□□□ -0.48
RAD51B-208ENST00000479335 KIF6Q6ZMV9 814 aa12.08□□□□□ -0.48
RAD51B-208ENST00000479335 SMARCC1Q92922 1105 aaPredicted RBP12.08□□□□□ -0.48
RAD51B-208ENST00000479335 IL1RAPL2Q9NP60 686 aa12.08□□□□□ -0.48
RAD51B-208ENST00000479335 TUBGCP6Q96RT7 1819 aa12.08□□□□□ -0.48
RAD51B-208ENST00000479335 ERC2O15083 957 aa12.08□□□□□ -0.48
RAD51B-208ENST00000479335 EPB41L2O43491 1005 aaKnown RBP12.08□□□□□ -0.48
RAD51B-208ENST00000479335 IL6STP40189 918 aaPredicted RBP12.08□□□□□ -0.48
RAD51B-208ENST00000479335 UBE3BQ7Z3V4 1068 aa12.08□□□□□ -0.48
RAD51B-208ENST00000479335 SYTL4Q96C24 671 aaPredicted RBP12.08□□□□□ -0.48
RAD51B-208ENST00000479335 GPATCH3Q96I76 525 aa12.08□□□□□ -0.48
RAD51B-208ENST00000479335 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.48
RAD51B-208ENST00000479335 CICQ96RK0 1608 aaPredicted RBP12.07□□□□□ -0.48
RAD51B-208ENST00000479335 KAT6BQ8WYB5 2073 aa12.07□□□□□ -0.48
RAD51B-208ENST00000479335 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.07□□□□□ -0.48
RAD51B-208ENST00000479335 ERVV-1B6SEH8 477 aa12.07□□□□□ -0.48
RAD51B-208ENST00000479335 REC8O95072 547 aa12.07□□□□□ -0.48
RAD51B-208ENST00000479335 RFX5P48382 616 aaPredicted RBP12.07□□□□□ -0.48
RAD51B-208ENST00000479335 EPHA10Q5JZY3 1008 aa12.07□□□□□ -0.48
RAD51B-208ENST00000479335 GIGYF2Q6Y7W6 1299 aaKnown RBP12.07□□□□□ -0.48
RAD51B-208ENST00000479335 C8orf37Q96NL8 207 aa12.07□□□□□ -0.48
RAD51B-208ENST00000479335 ZBTB3Q9H5J0 574 aa12.07□□□□□ -0.48
RAD51B-208ENST00000479335 MAP3K15Q6ZN16 1313 aa12.07□□□□□ -0.48
RAD51B-208ENST00000479335 GLRX3O76003 335 aaKnown RBP12.06□□□□□ -0.48
RAD51B-208ENST00000479335 SASH1O94885 1247 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms