RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 HIP1O00291 1037 aa10.25□□□□□ -0.77
USP30-206ENST00000479219 SGSM2O43147 1006 aa10.25□□□□□ -0.77
USP30-206ENST00000479219 LMOD2Q6P5Q4 547 aa10.25□□□□□ -0.77
USP30-206ENST00000479219 C5P01031 1676 aa10.25□□□□□ -0.77
USP30-206ENST00000479219 MCTP1Q6DN14 999 aa10.24□□□□□ -0.77
USP30-206ENST00000479219 NUTM1Q86Y26 1132 aa10.24□□□□□ -0.77
USP30-206ENST00000479219 RBM33Q96EV2 1170 aaKnown RBP10.24□□□□□ -0.77
USP30-206ENST00000479219 LAMB4A4D0S4 1761 aa10.24□□□□□ -0.77
USP30-206ENST00000479219 KCNQ3O43525 872 aa10.24□□□□□ -0.77
USP30-206ENST00000479219 MBD3O95983 291 aa10.24□□□□□ -0.77
USP30-206ENST00000479219 TATP17735 454 aaPredicted RBP10.24□□□□□ -0.77
USP30-206ENST00000479219 ATF3P18847 181 aa10.24□□□□□ -0.77
USP30-206ENST00000479219 ZNF445P59923 1031 aa10.24□□□□□ -0.77
USP30-206ENST00000479219 PDCL3Q9H2J4 239 aa10.24□□□□□ -0.77
USP30-206ENST00000479219 ECHDC1Q9NTX5 307 aa10.24□□□□□ -0.77
USP30-206ENST00000479219 GRM8O00222 908 aa10.23□□□□□ -0.77
USP30-206ENST00000479219 NEXNQ0ZGT2 675 aa10.23□□□□□ -0.77
USP30-206ENST00000479219 CCDC173Q0VFZ6 552 aa10.23□□□□□ -0.77
USP30-206ENST00000479219 LARP1Q6PKG0 1096 aaKnown RBP10.23□□□□□ -0.77
USP30-206ENST00000479219 SLC52A2Q9HAB3 445 aa10.23□□□□□ -0.77
USP30-206ENST00000479219 NPHP3Q7Z494 1330 aa10.23□□□□□ -0.77
USP30-206ENST00000479219 IFIT2P09913 472 aaKnown RBP10.23□□□□□ -0.77
USP30-206ENST00000479219 ZNF790Q6PG37 636 aa10.23□□□□□ -0.77
USP30-206ENST00000479219 UNC5CLQ8IV45 518 aa10.23□□□□□ -0.77
USP30-206ENST00000479219 ZGPATQ8N5A5 531 aaKnown RBP10.23□□□□□ -0.77
USP30-206ENST00000479219 DIAPH3Q9NSV4 1193 aa10.23□□□□□ -0.77
USP30-206ENST00000479219 LMBRD1Q9NUN5 540 aa10.23□□□□□ -0.77
USP30-206ENST00000479219 EVI5LQ96CN4 794 aa10.22□□□□□ -0.77
USP30-206ENST00000479219 TNS3Q68CZ2 1445 aa10.22□□□□□ -0.77
USP30-206ENST00000479219 COL15A1P39059 1388 aa10.22□□□□□ -0.77
USP30-206ENST00000479219 BRD1O95696 1058 aa10.22□□□□□ -0.77
USP30-206ENST00000479219 XPCQ01831 940 aaPredicted RBP10.22□□□□□ -0.77
USP30-206ENST00000479219 IFNL2Q8IZJ0 200 aa10.22□□□□□ -0.77
USP30-206ENST00000479219 PALD1Q9ULE6 856 aa10.22□□□□□ -0.77
USP30-206ENST00000479219 AXIN2Q9Y2T1 843 aa10.22□□□□□ -0.77
USP30-206ENST00000479219 AFDNP55196 1824 aaKnown RBP10.21□□□□□ -0.77
USP30-206ENST00000479219 WDR33Q9C0J8 1336 aaKnown RBP10.21□□□□□ -0.77
USP30-206ENST00000479219 KDM6AO15550 1401 aaPredicted RBP10.21□□□□□ -0.77
USP30-206ENST00000479219 CPDO75976 1380 aa10.21□□□□□ -0.77
USP30-206ENST00000479219 CADPS2Q86UW7 1296 aa10.21□□□□□ -0.78
USP30-206ENST00000479219 ZSCAN30Q86W11 494 aa10.21□□□□□ -0.78
USP30-206ENST00000479219 GAS2L3Q86XJ1 694 aa10.21□□□□□ -0.78
USP30-206ENST00000479219 DCAF5Q96JK2 942 aa10.21□□□□□ -0.78
USP30-206ENST00000479219 PPP1R9BQ96SB3 815 aa10.21□□□□□ -0.78
USP30-206ENST00000479219 LSG1Q9H089 658 aaKnown RBP10.21□□□□□ -0.78
USP30-206ENST00000479219 A0A0U1RQG5 324 aaPredicted RBP10.2□□□□□ -0.78
USP30-206ENST00000479219 PHKG2P15735 406 aa10.2□□□□□ -0.78
USP30-206ENST00000479219 TERF1P54274 439 aa10.2□□□□□ -0.78
USP30-206ENST00000479219 G3BP1Q13283 466 aaKnown RBP eCLIP10.2□□□□□ -0.78
USP30-206ENST00000479219 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.2□□□□□ -0.78
USP30-206ENST00000479219 SYAP1Q96A49 352 aaPredicted RBP10.2□□□□□ -0.78
USP30-206ENST00000479219 NLRP2Q9NX02 1062 aa10.2□□□□□ -0.78
USP30-206ENST00000479219 ZDHHC9Q9Y397 364 aa10.2□□□□□ -0.78
USP30-206ENST00000479219 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.2□□□□□ -0.78
USP30-206ENST00000479219 ARFGEF2Q9Y6D5 1785 aa10.2□□□□□ -0.78
USP30-206ENST00000479219 ANXA1P04083 346 aa10.2□□□□□ -0.78
USP30-206ENST00000479219 NASPP49321 788 aaPredicted RBP10.2□□□□□ -0.78
USP30-206ENST00000479219 RIC3Q7Z5B4 369 aa10.2□□□□□ -0.78
USP30-206ENST00000479219 TM6SF1Q9BZW5 370 aa10.2□□□□□ -0.78
USP30-206ENST00000479219 PKP1Q13835 747 aa10.2□□□□□ -0.78
USP30-206ENST00000479219 PROSER3Q2NL68 480 aa10.2□□□□□ -0.78
USP30-206ENST00000479219 TTC5Q8N0Z6 440 aa10.2□□□□□ -0.78
USP30-206ENST00000479219 SNRPA1P09661 255 aaKnown RBP10.19□□□□□ -0.78
USP30-206ENST00000479219 ZSCAN23Q3MJ62 389 aa10.19□□□□□ -0.78
USP30-206ENST00000479219 SNX14Q9Y5W7 946 aa10.19□□□□□ -0.78
USP30-206ENST00000479219 MEGF6O75095 1541 aa10.19□□□□□ -0.78
USP30-206ENST00000479219 PRPF40AO75400 957 aaKnown RBP10.19□□□□□ -0.78
USP30-206ENST00000479219 OFD1O75665 1012 aa10.19□□□□□ -0.78
USP30-206ENST00000479219 PHF14O94880 888 aa10.19□□□□□ -0.78
USP30-206ENST00000479219 NCLP19338 710 aaKnown RBP10.19□□□□□ -0.78
USP30-206ENST00000479219 PDIA6Q15084 440 aa10.19□□□□□ -0.78
USP30-206ENST00000479219 CWF19L2Q2TBE0 894 aaKnown RBP10.19□□□□□ -0.78
USP30-206ENST00000479219 CAVIN1Q6NZI2 390 aaKnown RBP10.19□□□□□ -0.78
USP30-206ENST00000479219 KCNB2Q92953 911 aa10.19□□□□□ -0.78
USP30-206ENST00000479219 ZSCAN31Q96LW9 406 aaPredicted RBP10.19□□□□□ -0.78
USP30-206ENST00000479219 METTL22Q9BUU2 404 aaPredicted RBP10.19□□□□□ -0.78
USP30-206ENST00000479219 LIMCH1Q9UPQ0 1083 aa10.19□□□□□ -0.78
USP30-206ENST00000479219 ATP6V1DQ9Y5K8 247 aa10.19□□□□□ -0.78
USP30-206ENST00000479219 TMEM94Q12767 1356 aa10.19□□□□□ -0.78
USP30-206ENST00000479219 RFX7Q2KHR2 1363 aa10.19□□□□□ -0.78
USP30-206ENST00000479219 STRCP1A6NGW2 1772 aa10.19□□□□□ -0.78
USP30-206ENST00000479219 ZKSCAN1P17029 563 aaPredicted RBP10.18□□□□□ -0.78
USP30-206ENST00000479219 ZC3H6P61129 1189 aaKnown RBP10.18□□□□□ -0.78
USP30-206ENST00000479219 CWC27Q6UX04 472 aaKnown RBP10.18□□□□□ -0.78
USP30-206ENST00000479219 AACSQ86V21 672 aa10.18□□□□□ -0.78
USP30-206ENST00000479219 TTC14Q96N46 770 aa10.18□□□□□ -0.78
USP30-206ENST00000479219 FMNL2Q96PY5 1086 aa10.18□□□□□ -0.78
USP30-206ENST00000479219 UPF3BQ9BZI7 483 aaKnown RBP10.18□□□□□ -0.78
USP30-206ENST00000479219 BCL11BQ9C0K0 894 aaPredicted RBP10.18□□□□□ -0.78
USP30-206ENST00000479219 SH2B1Q9NRF2 756 aaPredicted RBP10.18□□□□□ -0.78
USP30-206ENST00000479219 SNRKQ9NRH2 765 aa10.18□□□□□ -0.78
USP30-206ENST00000479219 CSB-PGBD3P0DP91 1061 aa10.18□□□□□ -0.78
USP30-206ENST00000479219 VPS53Q5VIR6 699 aa10.18□□□□□ -0.78
USP30-206ENST00000479219 TICAM2Q86XR7 235 aa10.18□□□□□ -0.78
USP30-206ENST00000479219 SUCLG2Q96I99 432 aa10.18□□□□□ -0.78
USP30-206ENST00000479219 MAP7D2Q96T17 732 aa10.18□□□□□ -0.78
USP30-206ENST00000479219 BICC1Q9H694 974 aaKnown RBP10.18□□□□□ -0.78
USP30-206ENST00000479219 NEURL1BA8MQ27 555 aa10.17□□□□□ -0.78
USP30-206ENST00000479219 MSNP26038 577 aaKnown RBP10.17□□□□□ -0.78
USP30-206ENST00000479219 GCKRQ14397 625 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms