RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 COL11A2P13942 1736 aaPredicted RBP10.74□□□□□ -0.69
VPS45-208ENST00000478999 IL16Q14005 1332 aa10.74□□□□□ -0.69
VPS45-208ENST00000478999 CNTNAP1P78357 1384 aa10.74□□□□□ -0.69
VPS45-208ENST00000478999 SCN4AP35499 1836 aa10.73□□□□□ -0.69
VPS45-208ENST00000478999 POTEIP0CG38 1075 aa10.73□□□□□ -0.69
VPS45-208ENST00000478999 POTEJP0CG39 1038 aa10.73□□□□□ -0.69
VPS45-208ENST00000478999 AEBP1Q8IUX7 1158 aa10.73□□□□□ -0.69
VPS45-208ENST00000478999 UBR2Q8IWV8 1755 aa10.72□□□□□ -0.69
VPS45-208ENST00000478999 NFKBIEO00221 500 aa10.72□□□□□ -0.69
VPS45-208ENST00000478999 CTCFP49711 727 aaPredicted RBP10.72□□□□□ -0.69
VPS45-208ENST00000478999 ABHD8Q96I13 439 aa10.72□□□□□ -0.69
VPS45-208ENST00000478999 SIPA1L3O60292 1781 aaPredicted RBP10.72□□□□□ -0.69
VPS45-208ENST00000478999 DLG5Q8TDM6 1919 aa10.72□□□□□ -0.69
VPS45-208ENST00000478999 PTCD1O75127 700 aaKnown RBP10.71□□□□□ -0.69
VPS45-208ENST00000478999 HMOX1P09601 288 aa10.71□□□□□ -0.69
VPS45-208ENST00000478999 TM4SF1P30408 202 aa10.71□□□□□ -0.69
VPS45-208ENST00000478999 CRKLP46109 303 aaKnown RBP10.71□□□□□ -0.69
VPS45-208ENST00000478999 LBX1P52954 281 aa10.71□□□□□ -0.69
VPS45-208ENST00000478999 CHADLQ6NUI6 762 aa10.71□□□□□ -0.69
VPS45-208ENST00000478999 ARFGEF2Q9Y6D5 1785 aa10.71□□□□□ -0.69
VPS45-208ENST00000478999 U2SURPO15042 1029 aaKnown RBP10.7□□□□□ -0.7
VPS45-208ENST00000478999 PLIN1O60240 522 aa10.7□□□□□ -0.7
VPS45-208ENST00000478999 DIAPH1O60610 1272 aaKnown RBP10.7□□□□□ -0.7
VPS45-208ENST00000478999 NFATC2IPQ8NCF5 419 aa10.7□□□□□ -0.7
VPS45-208ENST00000478999 AIDAQ96BJ3 306 aa10.7□□□□□ -0.7
VPS45-208ENST00000478999 RNF39Q9H2S5 420 aa10.7□□□□□ -0.7
VPS45-208ENST00000478999 ADAMTSL1Q8N6G6 1762 aa10.7□□□□□ -0.7
VPS45-208ENST00000478999 CARMIL3Q8ND23 1372 aa10.69□□□□□ -0.7
VPS45-208ENST00000478999 PASKQ96RG2 1323 aa10.69□□□□□ -0.7
VPS45-208ENST00000478999 MAPK8IP3Q9UPT6 1336 aa10.69□□□□□ -0.7
VPS45-208ENST00000478999 U2AF1L5P0DN76 240 aaPredicted RBP10.69□□□□□ -0.7
VPS45-208ENST00000478999 IL13P35225 146 aa10.69□□□□□ -0.7
VPS45-208ENST00000478999 VEGFBP49765 207 aa10.69□□□□□ -0.7
VPS45-208ENST00000478999 U2AF1Q01081 240 aaKnown RBP eCLIP10.69□□□□□ -0.7
VPS45-208ENST00000478999 AKAP4Q5JQC9 854 aa10.69□□□□□ -0.7
VPS45-208ENST00000478999 DPY19L2Q6NUT2 758 aa10.69□□□□□ -0.7
VPS45-208ENST00000478999 IPO9Q96P70 1041 aaKnown RBP10.69□□□□□ -0.7
VPS45-208ENST00000478999 BACH2Q9BYV9 841 aa10.69□□□□□ -0.7
VPS45-208ENST00000478999 WBP1LQ9NX94 342 aa10.69□□□□□ -0.7
VPS45-208ENST00000478999 SLX4Q8IY92 1834 aa10.69□□□□□ -0.7
VPS45-208ENST00000478999 THSD7BQ9C0I4 1608 aa10.69□□□□□ -0.7
VPS45-208ENST00000478999 HSPA8P11142 646 aaKnown RBP10.68□□□□□ -0.7
VPS45-208ENST00000478999 USPL1Q5W0Q7 1092 aa10.68□□□□□ -0.7
VPS45-208ENST00000478999 TTLL6Q8N841 843 aa10.68□□□□□ -0.7
VPS45-208ENST00000478999 ZNF428Q96B54 188 aa10.68□□□□□ -0.7
VPS45-208ENST00000478999 SPINK5Q9NQ38 1064 aaPredicted RBP10.68□□□□□ -0.7
VPS45-208ENST00000478999 NOP58Q9Y2X3 529 aaKnown RBP10.68□□□□□ -0.7
VPS45-208ENST00000478999 TNRC18O15417 2968 aaPredicted RBP10.67□□□□□ -0.7
VPS45-208ENST00000478999 NEFMP07197 916 aa10.67□□□□□ -0.7
VPS45-208ENST00000478999 PDE4AP27815 886 aa10.67□□□□□ -0.7
VPS45-208ENST00000478999 CANXP27824 592 aaKnown RBP10.67□□□□□ -0.7
VPS45-208ENST00000478999 MLLT1Q03111 559 aaPredicted RBP10.67□□□□□ -0.7
VPS45-208ENST00000478999 CALD1Q05682 793 aaKnown RBP10.67□□□□□ -0.7
VPS45-208ENST00000478999 NFIXQ14938 502 aa10.67□□□□□ -0.7
VPS45-208ENST00000478999 C20orf194Q5TEA3 1177 aa10.67□□□□□ -0.7
VPS45-208ENST00000478999 INTS5Q6P9B9 1019 aaKnown RBP10.67□□□□□ -0.7
VPS45-208ENST00000478999 TTC5Q8N0Z6 440 aa10.67□□□□□ -0.7
VPS45-208ENST00000478999 MRC1P22897 1456 aa10.67□□□□□ -0.7
VPS45-208ENST00000478999 DDNO94850 711 aaPredicted RBP10.66□□□□□ -0.7
VPS45-208ENST00000478999 RGS19P49795 217 aa10.66□□□□□ -0.7
VPS45-208ENST00000478999 RARSP54136 660 aaKnown RBP10.66□□□□□ -0.7
VPS45-208ENST00000478999 ERFEQ4G0M1 354 aa10.66□□□□□ -0.7
VPS45-208ENST00000478999 DDRGK1Q96HY6 314 aa10.66□□□□□ -0.7
VPS45-208ENST00000478999 PLEKHF1Q96S99 279 aa10.66□□□□□ -0.7
VPS45-208ENST00000478999 SLC52A2Q9HAB3 445 aa10.66□□□□□ -0.7
VPS45-208ENST00000478999 SOS1Q07889 1333 aaPredicted RBP10.65□□□□□ -0.7
VPS45-208ENST00000478999 CASP8AP2Q9UKL3 1982 aa10.65□□□□□ -0.7
VPS45-208ENST00000478999 RNMTO43148 476 aaKnown RBP10.65□□□□□ -0.7
VPS45-208ENST00000478999 ZPR1O75312 459 aa10.65□□□□□ -0.7
VPS45-208ENST00000478999 SERPINB2P05120 415 aa10.65□□□□□ -0.7
VPS45-208ENST00000478999 TMPOP42166 694 aaKnown RBP10.65□□□□□ -0.7
VPS45-208ENST00000478999 TEFQ10587 303 aa10.65□□□□□ -0.7
VPS45-208ENST00000478999 NPM2Q86SE8 214 aaKnown RBP10.65□□□□□ -0.7
VPS45-208ENST00000478999 C2CD5Q86YS7 1000 aa10.65□□□□□ -0.7
VPS45-208ENST00000478999 CLUAP1Q96AJ1 413 aa10.65□□□□□ -0.7
VPS45-208ENST00000478999 SCN7AQ01118 1682 aa10.65□□□□□ -0.7
VPS45-208ENST00000478999 TRPM7Q96QT4 1865 aa10.65□□□□□ -0.7
VPS45-208ENST00000478999 CCDC85CA6NKD9 419 aa10.64□□□□□ -0.71
VPS45-208ENST00000478999 TMEM88BA6NKF7 163 aa10.64□□□□□ -0.71
VPS45-208ENST00000478999 H0YIN7 160 aa10.64□□□□□ -0.71
VPS45-208ENST00000478999 ITGBL1O95965 494 aaPredicted RBP10.64□□□□□ -0.71
VPS45-208ENST00000478999 LDHDQ86WU2 507 aa10.64□□□□□ -0.71
VPS45-208ENST00000478999 GAS2L2Q8NHY3 880 aa10.64□□□□□ -0.71
VPS45-208ENST00000478999 BCL2L12Q9HB09 334 aa10.64□□□□□ -0.71
VPS45-208ENST00000478999 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
VPS45-208ENST00000478999 LAMB4A4D0S4 1761 aa10.64□□□□□ -0.71
VPS45-208ENST00000478999 BCORQ6W2J9 1755 aa10.64□□□□□ -0.71
VPS45-208ENST00000478999 COL15A1P39059 1388 aa10.64□□□□□ -0.71
VPS45-208ENST00000478999 C21orf2O43822 256 aa10.63□□□□□ -0.71
VPS45-208ENST00000478999 BCAR3O75815 825 aa10.63□□□□□ -0.71
VPS45-208ENST00000478999 LMOD3Q0VAK6 560 aa10.63□□□□□ -0.71
VPS45-208ENST00000478999 SLC39A6Q13433 755 aa10.63□□□□□ -0.71
VPS45-208ENST00000478999 MTHFSDQ2M296 383 aaKnown RBP10.63□□□□□ -0.71
VPS45-208ENST00000478999 DNAJC10Q8IXB1 793 aa10.63□□□□□ -0.71
VPS45-208ENST00000478999 LGR6Q9HBX8 967 aa10.63□□□□□ -0.71
VPS45-208ENST00000478999 NARFQ9UHQ1 456 aa10.63□□□□□ -0.71
VPS45-208ENST00000478999 ZNF330Q9Y3S2 320 aaPredicted RBP10.63□□□□□ -0.71
VPS45-208ENST00000478999 LTBP1Q14766 1721 aa10.63□□□□□ -0.71
VPS45-208ENST00000478999 KIF16BQ96L93 1317 aa10.62□□□□□ -0.71
VPS45-208ENST00000478999 LTBP3Q9NS15 1303 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms