RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CHSY3Q70JA7 882 aa8.35□□□□□ -1.07
CDC42BPA-212ENST00000478573 RHPN1Q8TCX5 695 aa8.35□□□□□ -1.07
CDC42BPA-212ENST00000478573 TSPAN10Q9H1Z9 355 aaPredicted RBP8.35□□□□□ -1.07
CDC42BPA-212ENST00000478573 KLF15Q9UIH9 416 aa8.35□□□□□ -1.07
CDC42BPA-212ENST00000478573 KRBA1A5PL33 1030 aa8.34□□□□□ -1.07
CDC42BPA-212ENST00000478573 EML1O00423 815 aa8.34□□□□□ -1.07
CDC42BPA-212ENST00000478573 HOXB4P17483 251 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-212ENST00000478573 ZNF468Q5VIY5 522 aaPredicted RBP8.34□□□□□ -1.07
CDC42BPA-212ENST00000478573 LOC100996750A0A140TA64 210 aa8.33□□□□□ -1.08
CDC42BPA-212ENST00000478573 EFSO43281 561 aa8.33□□□□□ -1.08
CDC42BPA-212ENST00000478573 DGKGP49619 791 aa8.33□□□□□ -1.08
CDC42BPA-212ENST00000478573 PSMA6P60900 246 aaKnown RBP8.33□□□□□ -1.08
CDC42BPA-212ENST00000478573 PROSER2Q86WR7 435 aaPredicted RBP8.33□□□□□ -1.08
CDC42BPA-212ENST00000478573 TSEN2Q8NCE0 465 aaKnown RBP8.33□□□□□ -1.08
CDC42BPA-212ENST00000478573 GLMNQ92990 594 aa8.33□□□□□ -1.08
CDC42BPA-212ENST00000478573 KRTAP4-6Q9BYQ5 205 aa8.33□□□□□ -1.08
CDC42BPA-212ENST00000478573 AVENQ9NQS1 362 aaPredicted RBP8.33□□□□□ -1.08
CDC42BPA-212ENST00000478573 HCN4Q9Y3Q4 1203 aa8.33□□□□□ -1.08
CDC42BPA-212ENST00000478573 PALM3A6NDB9 673 aaPredicted RBP8.32□□□□□ -1.08
CDC42BPA-212ENST00000478573 SFI1A8K8P3 1242 aa8.32□□□□□ -1.08
CDC42BPA-212ENST00000478573 PROCP04070 461 aa8.32□□□□□ -1.08
CDC42BPA-212ENST00000478573 LARGE2Q8N3Y3 721 aa8.32□□□□□ -1.08
CDC42BPA-212ENST00000478573 LAMC2Q13753 1193 aa8.31□□□□□ -1.08
CDC42BPA-212ENST00000478573 SYT9Q86SS6 491 aa8.31□□□□□ -1.08
CDC42BPA-212ENST00000478573 ALYREFQ86V81 257 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-212ENST00000478573 HSH2DQ96JZ2 352 aa8.31□□□□□ -1.08
CDC42BPA-212ENST00000478573 PPP1R12BO60237 982 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-212ENST00000478573 RASA1P20936 1047 aa8.3□□□□□ -1.08
CDC42BPA-212ENST00000478573 SFSWAPQ12872 951 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-212ENST00000478573 PHACTR1Q9C0D0 580 aa8.3□□□□□ -1.08
CDC42BPA-212ENST00000478573 NOP53Q9NZM5 478 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-212ENST00000478573 TFIP11Q9UBB9 837 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-212ENST00000478573 ERICH6Q7L0X2 663 aa8.29□□□□□ -1.08
CDC42BPA-212ENST00000478573 RAB44Q7Z6P3 723 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-212ENST00000478573 SIX5Q8N196 739 aa8.29□□□□□ -1.08
CDC42BPA-212ENST00000478573 CEP63Q96MT8 703 aa8.29□□□□□ -1.08
CDC42BPA-212ENST00000478573 GPC6Q9Y625 555 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-212ENST00000478573 ALAS2P22557 587 aa8.28□□□□□ -1.08
CDC42BPA-212ENST00000478573 CHMP7Q8WUX9 453 aaPredicted RBP8.28□□□□□ -1.08
CDC42BPA-212ENST00000478573 SLC30A3Q99726 388 aa8.28□□□□□ -1.08
CDC42BPA-212ENST00000478573 BRD7Q9NPI1 651 aa8.28□□□□□ -1.08
CDC42BPA-212ENST00000478573 ELOA3CA0A087WX78 387 aaPredicted RBP8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 ELOA3DA6NLF2 546 aaPredicted RBP8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 M0R2N6 131 aa8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 ADAM23O75077 832 aa8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 LGR5O75473 907 aa8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 BAG6P46379 1132 aa8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 ELOA3BQ3SY89 546 aa8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 ELOA3Q8NG57 546 aa8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 C7orf43Q8WVR3 580 aa8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 SCG3Q8WXD2 468 aaKnown RBP8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 NGLY1Q96IV0 654 aa8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 CALR3Q96L12 384 aaKnown RBP8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 ANKIB1Q9P2G1 1089 aa8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 MAFBQ9Y5Q3 323 aaPredicted RBP8.27□□□□□ -1.09
CDC42BPA-212ENST00000478573 SPEM2Q0P670 501 aa8.26□□□□□ -1.09
CDC42BPA-212ENST00000478573 C1orf53Q5VUE5 145 aa8.26□□□□□ -1.09
CDC42BPA-212ENST00000478573 LARP1Q6PKG0 1096 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-212ENST00000478573 FNBP4Q8N3X1 1017 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-212ENST00000478573 ZNF280CQ8ND82 737 aa8.26□□□□□ -1.09
CDC42BPA-212ENST00000478573 PLVAPQ9BX97 442 aa8.26□□□□□ -1.09
CDC42BPA-212ENST00000478573 ATAD2Q6PL18 1390 aa8.25□□□□□ -1.09
CDC42BPA-212ENST00000478573 C1QTNF9BB2RNN3 333 aa8.25□□□□□ -1.09
CDC42BPA-212ENST00000478573 HIRAP54198 1017 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-212ENST00000478573 SEC13P55735 322 aa8.25□□□□□ -1.09
CDC42BPA-212ENST00000478573 NEUROD1Q13562 356 aa8.25□□□□□ -1.09
CDC42BPA-212ENST00000478573 TRIM11Q96F44 468 aa8.25□□□□□ -1.09
CDC42BPA-212ENST00000478573 SUSD3Q96L08 255 aa8.25□□□□□ -1.09
CDC42BPA-212ENST00000478573 HINFPQ9BQA5 517 aa8.25□□□□□ -1.09
CDC42BPA-212ENST00000478573 C21orf2O43822 256 aa8.24□□□□□ -1.09
CDC42BPA-212ENST00000478573 FURINP09958 794 aa8.24□□□□□ -1.09
CDC42BPA-212ENST00000478573 CHRNA4P43681 627 aa8.24□□□□□ -1.09
CDC42BPA-212ENST00000478573 CD163Q86VB7 1156 aa8.24□□□□□ -1.09
CDC42BPA-212ENST00000478573 ALDH16A1Q8IZ83 802 aa8.24□□□□□ -1.09
CDC42BPA-212ENST00000478573 TIMELESSQ9UNS1 1208 aa8.24□□□□□ -1.09
CDC42BPA-212ENST00000478573 K7ELQ4 463 aaPredicted RBP8.23□□□□□ -1.09
CDC42BPA-212ENST00000478573 SIN3BO75182 1162 aa8.23□□□□□ -1.09
CDC42BPA-212ENST00000478573 DKK1O94907 266 aa8.23□□□□□ -1.09
CDC42BPA-212ENST00000478573 TYRO3Q06418 890 aa8.23□□□□□ -1.09
CDC42BPA-212ENST00000478573 TBC1D8BQ0IIM8 1120 aa8.23□□□□□ -1.09
CDC42BPA-212ENST00000478573 KCNH4Q9UQ05 1017 aa8.23□□□□□ -1.09
CDC42BPA-212ENST00000478573 M0R082 166 aa8.22□□□□□ -1.09
CDC42BPA-212ENST00000478573 LMOD1P29536 600 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-212ENST00000478573 ADH7P40394 386 aa8.22□□□□□ -1.09
CDC42BPA-212ENST00000478573 DPYDQ12882 1025 aa8.22□□□□□ -1.09
CDC42BPA-212ENST00000478573 CRTC2Q53ET0 693 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-212ENST00000478573 GAS2L2Q8NHY3 880 aa8.22□□□□□ -1.09
CDC42BPA-212ENST00000478573 ZNF417Q8TAU3 575 aa8.22□□□□□ -1.09
CDC42BPA-212ENST00000478573 BHMTQ93088 406 aa8.22□□□□□ -1.09
CDC42BPA-212ENST00000478573 ZNF587Q96SQ5 575 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-212ENST00000478573 C2orf49Q9BVC5 232 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-212ENST00000478573 PPP1R12CQ9BZL4 782 aa8.22□□□□□ -1.09
CDC42BPA-212ENST00000478573 POTEAQ6S8J7 498 aa8.21□□□□□ -1.1
CDC42BPA-212ENST00000478573 C8orf86Q6ZUL3 223 aa8.21□□□□□ -1.1
CDC42BPA-212ENST00000478573 IGFLR1Q9H665 355 aa8.21□□□□□ -1.1
CDC42BPA-212ENST00000478573 SPDYE3A6NKU9 549 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 ADARB2-AS1A8MUL3 147 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 USP17L15C9J2P7 530 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 USP17L10C9JJH3 530 aa8.2□□□□□ -1.1
CDC42BPA-212ENST00000478573 USP17L13C9JLJ4 530 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms