RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 PNMA6AP0CW24 399 aaPredicted RBP11.67□□□□□ -0.54
COL13A1-207ENST00000478219 SKILP12757 684 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 SYT10Q6XYQ8 523 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 G2E3Q7L622 706 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 TNMDQ9H2S6 317 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 ZCCHC17Q9NP64 241 aaKnown RBP11.67□□□□□ -0.54
COL13A1-207ENST00000478219 RSPH14Q9UHP6 348 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 PPP6R1Q9UPN7 881 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 LIMCH1Q9UPQ0 1083 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 VGFO15240 615 aaPredicted RBP11.66□□□□□ -0.54
COL13A1-207ENST00000478219 SLU7O95391 586 aaKnown RBP11.66□□□□□ -0.54
COL13A1-207ENST00000478219 ZNF165P49910 485 aa11.66□□□□□ -0.54
COL13A1-207ENST00000478219 SLFNL1Q499Z3 407 aa11.66□□□□□ -0.54
COL13A1-207ENST00000478219 NECAB1Q8N987 351 aa11.66□□□□□ -0.54
COL13A1-207ENST00000478219 RIMS2Q9UQ26 1411 aa11.66□□□□□ -0.54
COL13A1-207ENST00000478219 CDC42BPGQ6DT37 1551 aa11.66□□□□□ -0.54
COL13A1-207ENST00000478219 CCZ1BP86790 482 aa11.66□□□□□ -0.54
COL13A1-207ENST00000478219 CCZ1P86791 482 aaPredicted RBP11.66□□□□□ -0.54
COL13A1-207ENST00000478219 CDC37L1Q7L3B6 337 aa11.66□□□□□ -0.54
COL13A1-207ENST00000478219 TFIP11Q9UBB9 837 aaKnown RBP11.66□□□□□ -0.54
COL13A1-207ENST00000478219 ATP6V1DQ9Y5K8 247 aa11.66□□□□□ -0.54
COL13A1-207ENST00000478219 BMS1Q14692 1282 aaKnown RBP11.65□□□□□ -0.54
COL13A1-207ENST00000478219 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.65□□□□□ -0.54
COL13A1-207ENST00000478219 FILIP1Q7Z7B0 1213 aa11.65□□□□□ -0.54
COL13A1-207ENST00000478219 LRRCC1Q9C099 1032 aa11.65□□□□□ -0.54
COL13A1-207ENST00000478219 MINK1Q8N4C8 1332 aaPredicted RBP11.65□□□□□ -0.54
COL13A1-207ENST00000478219 ANKRD26Q9UPS8 1709 aa11.65□□□□□ -0.54
COL13A1-207ENST00000478219 SSH2Q76I76 1423 aa11.65□□□□□ -0.54
COL13A1-207ENST00000478219 ASXL2Q76L83 1435 aa11.65□□□□□ -0.54
COL13A1-207ENST00000478219 NR1I2O75469 434 aa11.65□□□□□ -0.55
COL13A1-207ENST00000478219 ADCK5Q3MIX3 580 aa11.65□□□□□ -0.55
COL13A1-207ENST00000478219 CCAR2Q8N163 923 aaKnown RBP11.65□□□□□ -0.55
COL13A1-207ENST00000478219 SMARCE1Q969G3 411 aa11.65□□□□□ -0.55
COL13A1-207ENST00000478219 IL1RAPL2Q9NP60 686 aa11.65□□□□□ -0.55
COL13A1-207ENST00000478219 HYPKQ9NX55 129 aa11.65□□□□□ -0.55
COL13A1-207ENST00000478219 CCDC69A6NI79 296 aa11.64□□□□□ -0.55
COL13A1-207ENST00000478219 HMMRO75330 724 aa11.64□□□□□ -0.55
COL13A1-207ENST00000478219 CASTP20810 708 aaKnown RBP11.64□□□□□ -0.55
COL13A1-207ENST00000478219 KRBA2Q6ZNG9 492 aa11.64□□□□□ -0.55
COL13A1-207ENST00000478219 SPG7Q9UQ90 795 aa11.64□□□□□ -0.55
COL13A1-207ENST00000478219 CCDC171Q6TFL3 1326 aa11.64□□□□□ -0.55
COL13A1-207ENST00000478219 AATKQ6ZMQ8 1374 aa11.64□□□□□ -0.55
COL13A1-207ENST00000478219 SEC31AO94979 1220 aaKnown RBP11.64□□□□□ -0.55
COL13A1-207ENST00000478219 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
COL13A1-207ENST00000478219 C11orf57Q6ZUT1 292 aaPredicted RBP11.64□□□□□ -0.55
COL13A1-207ENST00000478219 NUTM1Q86Y26 1132 aa11.64□□□□□ -0.55
COL13A1-207ENST00000478219 LSG1Q9H089 658 aaKnown RBP11.64□□□□□ -0.55
COL13A1-207ENST00000478219 IL13P35225 146 aa11.63□□□□□ -0.55
COL13A1-207ENST00000478219 NOP2P46087 812 aaKnown RBP11.63□□□□□ -0.55
COL13A1-207ENST00000478219 C10orf67Q8IYJ2 551 aa11.63□□□□□ -0.55
COL13A1-207ENST00000478219 RPGRIP1LQ68CZ1 1315 aa11.63□□□□□ -0.55
COL13A1-207ENST00000478219 KIDINS220Q9ULH0 1771 aa11.63□□□□□ -0.55
COL13A1-207ENST00000478219 ABCC3O15438 1527 aa11.63□□□□□ -0.55
COL13A1-207ENST00000478219 ME3Q16798 604 aa11.63□□□□□ -0.55
COL13A1-207ENST00000478219 ARHGAP29Q52LW3 1261 aa11.63□□□□□ -0.55
COL13A1-207ENST00000478219 EPC1Q9H2F5 836 aa11.63□□□□□ -0.55
COL13A1-207ENST00000478219 MIS18AQ9NYP9 233 aa11.63□□□□□ -0.55
COL13A1-207ENST00000478219 MAP2P11137 1827 aaKnown RBP11.62□□□□□ -0.55
COL13A1-207ENST00000478219 ZRANB2O95218 330 aaKnown RBP eCLIP11.62□□□□□ -0.55
COL13A1-207ENST00000478219 IQCB1Q15051 598 aa11.62□□□□□ -0.55
COL13A1-207ENST00000478219 RBM43Q6ZSC3 357 aaKnown RBP11.62□□□□□ -0.55
COL13A1-207ENST00000478219 PGBD1Q96JS3 809 aa11.62□□□□□ -0.55
COL13A1-207ENST00000478219 TERF2IPQ9NYB0 399 aa11.62□□□□□ -0.55
COL13A1-207ENST00000478219 CABP1Q9NZU7 370 aa11.62□□□□□ -0.55
COL13A1-207ENST00000478219 SGSM2O43147 1006 aa11.62□□□□□ -0.55
COL13A1-207ENST00000478219 IFIT2P09913 472 aaKnown RBP11.62□□□□□ -0.55
COL13A1-207ENST00000478219 FAM193AP78312 1265 aa11.62□□□□□ -0.55
COL13A1-207ENST00000478219 MCM10Q7L590 875 aa11.62□□□□□ -0.55
COL13A1-207ENST00000478219 TSPYL1Q9H0U9 437 aa11.62□□□□□ -0.55
COL13A1-207ENST00000478219 CLSTN2Q9H4D0 955 aa11.62□□□□□ -0.55
COL13A1-207ENST00000478219 L2HGDHQ9H9P8 463 aa11.62□□□□□ -0.55
COL13A1-207ENST00000478219 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
COL13A1-207ENST00000478219 STAP2Q9UGK3 403 aa11.62□□□□□ -0.55
COL13A1-207ENST00000478219 TTC21AQ8NDW8 1320 aa11.61□□□□□ -0.55
COL13A1-207ENST00000478219 MYO1CO00159 1063 aa11.61□□□□□ -0.55
COL13A1-207ENST00000478219 DHX16O60231 1041 aaKnown RBP11.61□□□□□ -0.55
COL13A1-207ENST00000478219 SASH3O75995 380 aa11.61□□□□□ -0.55
COL13A1-207ENST00000478219 TNNT3P45378 269 aaPredicted RBP11.61□□□□□ -0.55
COL13A1-207ENST00000478219 KRT85P78386 507 aa11.61□□□□□ -0.55
COL13A1-207ENST00000478219 E4F1Q66K89 784 aaPredicted RBP11.61□□□□□ -0.55
COL13A1-207ENST00000478219 SAMD1Q6SPF0 538 aaPredicted RBP11.61□□□□□ -0.55
COL13A1-207ENST00000478219 SECISBP2LQ93073 1101 aaKnown RBP11.61□□□□□ -0.55
COL13A1-207ENST00000478219 CDK12Q9NYV4 1490 aaPredicted RBP11.61□□□□□ -0.55
COL13A1-207ENST00000478219 CCDC93Q567U6 631 aa11.61□□□□□ -0.55
COL13A1-207ENST00000478219 GORABQ5T7V8 394 aa11.61□□□□□ -0.55
COL13A1-207ENST00000478219 CWC27Q6UX04 472 aaKnown RBP11.61□□□□□ -0.55
COL13A1-207ENST00000478219 CREBRFQ8IUR6 639 aa11.61□□□□□ -0.55
COL13A1-207ENST00000478219 RASSF4Q9H2L5 321 aa11.61□□□□□ -0.55
COL13A1-207ENST00000478219 ATG3Q9NT62 314 aa11.61□□□□□ -0.55
COL13A1-207ENST00000478219 LRRFIP2Q9Y608 721 aaKnown RBP11.61□□□□□ -0.55
COL13A1-207ENST00000478219 FANCGO15287 622 aa11.6□□□□□ -0.55
COL13A1-207ENST00000478219 CDC25BP30305 580 aa11.6□□□□□ -0.55
COL13A1-207ENST00000478219 LARP1BQ659C4 914 aaKnown RBP11.6□□□□□ -0.55
COL13A1-207ENST00000478219 PREX1Q8TCU6 1659 aa11.6□□□□□ -0.55
COL13A1-207ENST00000478219 SOX12O15370 315 aa11.6□□□□□ -0.55
COL13A1-207ENST00000478219 GNAI2P04899 355 aa11.6□□□□□ -0.55
COL13A1-207ENST00000478219 PTH1RQ03431 593 aa11.6□□□□□ -0.55
COL13A1-207ENST00000478219 MUM1L1Q5H9M0 696 aa11.6□□□□□ -0.55
COL13A1-207ENST00000478219 ZFYVE9O95405 1425 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms