RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TBC1D9BQ66K14 1250 aa10.19□□□□□ -0.78
SPTLC1-205ENST00000477888 PAXIP1Q6ZW49 1069 aaPredicted RBP10.19□□□□□ -0.78
SPTLC1-205ENST00000477888 TLL2Q9Y6L7 1015 aa10.19□□□□□ -0.78
SPTLC1-205ENST00000477888 PDE4DIPQ5VU43 2346 aa10.19□□□□□ -0.78
SPTLC1-205ENST00000477888 GRM1Q13255 1194 aa10.18□□□□□ -0.78
SPTLC1-205ENST00000477888 C1orf141Q5JVX7 400 aa10.18□□□□□ -0.78
SPTLC1-205ENST00000477888 MASTLQ96GX5 879 aa10.18□□□□□ -0.78
SPTLC1-205ENST00000477888 ADAMTSL1Q8N6G6 1762 aa10.18□□□□□ -0.78
SPTLC1-205ENST00000477888 DLEC1Q9Y238 1755 aa10.17□□□□□ -0.78
SPTLC1-205ENST00000477888 FKBP4Q02790 459 aaKnown RBP eCLIP10.17□□□□□ -0.78
SPTLC1-205ENST00000477888 GPC2Q8N158 579 aa10.17□□□□□ -0.78
SPTLC1-205ENST00000477888 SLC52A2Q9HAB3 445 aa10.17□□□□□ -0.78
SPTLC1-205ENST00000477888 ZNF277Q9NRM2 450 aaPredicted RBP10.17□□□□□ -0.78
SPTLC1-205ENST00000477888 THSD7BQ9C0I4 1608 aa10.16□□□□□ -0.78
SPTLC1-205ENST00000477888 CANXP27824 592 aaKnown RBP10.16□□□□□ -0.78
SPTLC1-205ENST00000477888 BRPF1P55201 1214 aaPredicted RBP10.16□□□□□ -0.78
SPTLC1-205ENST00000477888 SLC39A6Q13433 755 aa10.16□□□□□ -0.78
SPTLC1-205ENST00000477888 CCDC93Q567U6 631 aa10.16□□□□□ -0.78
SPTLC1-205ENST00000477888 SAPCD2Q86UD0 394 aa10.16□□□□□ -0.78
SPTLC1-205ENST00000477888 VSIG10Q8N0Z9 540 aa10.16□□□□□ -0.78
SPTLC1-205ENST00000477888 FER1L6Q2WGJ9 1857 aa10.16□□□□□ -0.78
SPTLC1-205ENST00000477888 CCDC88AQ3V6T2 1871 aa10.16□□□□□ -0.78
SPTLC1-205ENST00000477888 SCN4AP35499 1836 aa10.16□□□□□ -0.78
SPTLC1-205ENST00000477888 AFDNP55196 1824 aaKnown RBP10.16□□□□□ -0.78
SPTLC1-205ENST00000477888 TJP1Q07157 1748 aa10.16□□□□□ -0.78
SPTLC1-205ENST00000477888 A0A087WZG4 1122 aa10.15□□□□□ -0.78
SPTLC1-205ENST00000477888 TRAF5O00463 557 aa10.15□□□□□ -0.78
SPTLC1-205ENST00000477888 SOX10P56693 466 aa10.15□□□□□ -0.78
SPTLC1-205ENST00000477888 OLFM4Q6UX06 510 aa10.15□□□□□ -0.78
SPTLC1-205ENST00000477888 AEBP1Q8IUX7 1158 aa10.15□□□□□ -0.78
SPTLC1-205ENST00000477888 HHIPL1Q96JK4 782 aa10.15□□□□□ -0.78
SPTLC1-205ENST00000477888 LGR6Q9HBX8 967 aa10.15□□□□□ -0.78
SPTLC1-205ENST00000477888 DICER1Q9UPY3 1922 aaKnown RBP10.15□□□□□ -0.79
SPTLC1-205ENST00000477888 KLRG2A4D1S0 409 aaPredicted RBP10.14□□□□□ -0.79
SPTLC1-205ENST00000477888 EPS15P42566 896 aa10.14□□□□□ -0.79
SPTLC1-205ENST00000477888 RTKN2Q8IZC4 609 aa10.14□□□□□ -0.79
SPTLC1-205ENST00000477888 CNBD1Q8NA66 436 aa10.14□□□□□ -0.79
SPTLC1-205ENST00000477888 TBC1D2BQ9UPU7 963 aa10.14□□□□□ -0.79
SPTLC1-205ENST00000477888 IARSP41252 1262 aaKnown RBP10.13□□□□□ -0.79
SPTLC1-205ENST00000477888 SCNN1DP51172 638 aa10.13□□□□□ -0.79
SPTLC1-205ENST00000477888 CDCA8Q53HL2 280 aa10.13□□□□□ -0.79
SPTLC1-205ENST00000477888 CIAPIN1Q6FI81 312 aa10.13□□□□□ -0.79
SPTLC1-205ENST00000477888 SETDB2Q96T68 719 aa10.13□□□□□ -0.79
SPTLC1-205ENST00000477888 LTBP1Q14766 1721 aa10.13□□□□□ -0.79
SPTLC1-205ENST00000477888 STARD3NLO95772 234 aa10.12□□□□□ -0.79
SPTLC1-205ENST00000477888 TNNT2P45379 298 aaPredicted RBP10.12□□□□□ -0.79
SPTLC1-205ENST00000477888 ST5P78524 1137 aa10.12□□□□□ -0.79
SPTLC1-205ENST00000477888 AKAP4Q5JQC9 854 aa10.12□□□□□ -0.79
SPTLC1-205ENST00000477888 USP50Q70EL3 339 aaPredicted RBP10.12□□□□□ -0.79
SPTLC1-205ENST00000477888 SYNE4Q8N205 404 aa10.12□□□□□ -0.79
SPTLC1-205ENST00000477888 ZIC5Q96T25 663 aa10.12□□□□□ -0.79
SPTLC1-205ENST00000477888 ANKRD26Q9UPS8 1709 aa10.12□□□□□ -0.79
SPTLC1-205ENST00000477888 RNMTO43148 476 aaKnown RBP10.11□□□□□ -0.79
SPTLC1-205ENST00000477888 CAMTA2O94983 1202 aa10.11□□□□□ -0.79
SPTLC1-205ENST00000477888 NPR1P16066 1061 aa10.11□□□□□ -0.79
SPTLC1-205ENST00000477888 LMOD1P29536 600 aaPredicted RBP10.11□□□□□ -0.79
SPTLC1-205ENST00000477888 SULT6B1Q6IMI4 303 aa10.11□□□□□ -0.79
SPTLC1-205ENST00000477888 JDP2Q8WYK2 163 aa10.11□□□□□ -0.79
SPTLC1-205ENST00000477888 SLX4Q8IY92 1834 aa10.11□□□□□ -0.79
SPTLC1-205ENST00000477888 NPHP1O15259 732 aa10.1□□□□□ -0.79
SPTLC1-205ENST00000477888 CELF2O95319 508 aaKnown RBP10.1□□□□□ -0.79
SPTLC1-205ENST00000477888 IL6STP40189 918 aaPredicted RBP10.1□□□□□ -0.79
SPTLC1-205ENST00000477888 PSMD1Q99460 953 aa10.1□□□□□ -0.79
SPTLC1-205ENST00000477888 GJA3Q9Y6H8 435 aa10.1□□□□□ -0.79
SPTLC1-205ENST00000477888 ANKRD31Q8N7Z5 1873 aa10.1□□□□□ -0.79
SPTLC1-205ENST00000477888 EIF6P56537 245 aaKnown RBP10.09□□□□□ -0.79
SPTLC1-205ENST00000477888 NOGQ13253 232 aa10.09□□□□□ -0.79
SPTLC1-205ENST00000477888 PGAP2Q9UHJ9 254 aa10.09□□□□□ -0.79
SPTLC1-205ENST00000477888 SNED1Q8TER0 1413 aa10.08□□□□□ -0.8
SPTLC1-205ENST00000477888 COL11A2P13942 1736 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-205ENST00000477888 HABP4Q5JVS0 413 aaKnown RBP10.08□□□□□ -0.8
SPTLC1-205ENST00000477888 NBPF5PQ86XG9 351 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-205ENST00000477888 GCC1Q96CN9 775 aa10.08□□□□□ -0.8
SPTLC1-205ENST00000477888 ZNF496Q96IT1 587 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-205ENST00000477888 RNF216Q9NWF9 866 aaPredicted RBP10.08□□□□□ -0.8
SPTLC1-205ENST00000477888 SAGE1Q9NXZ1 904 aa10.08□□□□□ -0.8
SPTLC1-205ENST00000477888 KIF20BQ96Q89 1820 aa10.07□□□□□ -0.8
SPTLC1-205ENST00000477888 CASP8AP2Q9UKL3 1982 aa10.07□□□□□ -0.8
SPTLC1-205ENST00000477888 ALDH1B1P30837 517 aa10.07□□□□□ -0.8
SPTLC1-205ENST00000477888 TEX13AQ9BXU3 409 aaPredicted RBP10.07□□□□□ -0.8
SPTLC1-205ENST00000477888 GLIS2Q9BZE0 524 aaPredicted RBP10.07□□□□□ -0.8
SPTLC1-205ENST00000477888 ZNF330Q9Y3S2 320 aaPredicted RBP10.07□□□□□ -0.8
SPTLC1-205ENST00000477888 MRC1P22897 1456 aa10.06□□□□□ -0.8
SPTLC1-205ENST00000477888 A1BGP04217 495 aa10.06□□□□□ -0.8
SPTLC1-205ENST00000477888 IL13P35225 146 aa10.06□□□□□ -0.8
SPTLC1-205ENST00000477888 CLEC4GQ6UXB4 293 aa10.06□□□□□ -0.8
SPTLC1-205ENST00000477888 TPTE2Q6XPS3 522 aa10.06□□□□□ -0.8
SPTLC1-205ENST00000477888 NBPF15Q8N660 670 aa10.06□□□□□ -0.8
SPTLC1-205ENST00000477888 ADARB2Q9NS39 739 aaKnown RBP10.06□□□□□ -0.8
SPTLC1-205ENST00000477888 GPRC5DQ9NZD1 345 aa10.06□□□□□ -0.8
SPTLC1-205ENST00000477888 COL4A5P29400 1685 aa10.06□□□□□ -0.8
SPTLC1-205ENST00000477888 FAM155AB1AL88 458 aaPredicted RBP10.05□□□□□ -0.8
SPTLC1-205ENST00000477888 CC2D2BQ6DHV5 1058 aa10.05□□□□□ -0.8
SPTLC1-205ENST00000477888 CTU1Q7Z7A3 348 aaKnown RBP10.05□□□□□ -0.8
SPTLC1-205ENST00000477888 TTC5Q8N0Z6 440 aa10.05□□□□□ -0.8
SPTLC1-205ENST00000477888 ZC3H15Q8WU90 426 aaKnown RBP10.05□□□□□ -0.8
SPTLC1-205ENST00000477888 RNF186Q9NXI6 227 aa10.05□□□□□ -0.8
SPTLC1-205ENST00000477888 HEG1Q9ULI3 1381 aa10.04□□□□□ -0.8
SPTLC1-205ENST00000477888 TRPA1O75762 1119 aa10.04□□□□□ -0.8
SPTLC1-205ENST00000477888 HIRAP54198 1017 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms