RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 TXLNBQ8N3L3 684 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 GPATCH3Q96I76 525 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 TEX13AQ9BXU3 409 aaPredicted RBP4.97□□□□□ -1.61
CD55-208ENST00000476590 TBC1D2Q9BYX2 928 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 CWC15Q9P013 229 aaKnown RBP4.97□□□□□ -1.61
CD55-208ENST00000476590 NPC1L1Q9UHC9 1359 aa4.96□□□□□ -1.61
CD55-208ENST00000476590 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.96□□□□□ -1.62
CD55-208ENST00000476590 ANKRD18BA2A2Z9 1011 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 GOLGA6CA6NDK9 693 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 GOLGA6BA6NDN3 693 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 CD2BP2O95400 341 aaKnown RBP4.96□□□□□ -1.62
CD55-208ENST00000476590 GOLGA6DP0CG33 693 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 ZNF445P59923 1031 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 SART3Q15020 963 aaKnown RBP4.96□□□□□ -1.62
CD55-208ENST00000476590 MCTP2Q6DN12 878 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 DDX46Q7L014 1031 aaKnown RBP4.96□□□□□ -1.62
CD55-208ENST00000476590 SDR16C5Q8N3Y7 309 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 KIF18AQ8NI77 898 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 PIBF1Q8WXW3 757 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 CEP89Q96ST8 783 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 CDCA7Q9BWT1 371 aaPredicted RBP4.96□□□□□ -1.62
CD55-208ENST00000476590 GOLGA6AQ9NYA3 693 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 KLHL42Q9P2K6 505 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 RCAN3Q9UKA8 241 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 COG6Q9Y2V7 657 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 ZNF330Q9Y3S2 320 aaPredicted RBP4.96□□□□□ -1.62
CD55-208ENST00000476590 NUB1Q9Y5A7 615 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 KANK1Q14678 1352 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 FHAD1B1AJZ9 1412 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 CLIP1P30622 1438 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 NLRP1Q9C000 1473 aa4.96□□□□□ -1.62
CD55-208ENST00000476590 ARHGEF15O94989 841 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 FKBP5Q13451 457 aaPredicted RBP4.95□□□□□ -1.62
CD55-208ENST00000476590 RABEP1Q15276 862 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 MORC1Q86VD1 984 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 KLHL23Q8NBE8 558 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 TACO1Q9BSH4 297 aaKnown RBP4.95□□□□□ -1.62
CD55-208ENST00000476590 FAM53CQ9NYF3 392 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 VPS8Q8N3P4 1428 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 RAD54L2Q9Y4B4 1467 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 RB1CC1Q8TDY2 1594 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 FAM177BA6PVY3 158 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 CD151P48509 253 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 INHBEP58166 350 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 SF3A1Q15459 793 aaKnown RBP4.95□□□□□ -1.62
CD55-208ENST00000476590 GORABQ5T7V8 394 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 SYT10Q6XYQ8 523 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 SKAP1Q86WV1 359 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 ATG3Q9NT62 314 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 ZNF446Q9NWS9 450 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 ETAA1Q9NY74 926 aa4.95□□□□□ -1.62
CD55-208ENST00000476590 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.95□□□□□ -1.62
CD55-208ENST00000476590 SCRIBQ14160 1630 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 CCP110O43303 1012 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 EIF3JO75822 258 aaKnown RBP4.94□□□□□ -1.62
CD55-208ENST00000476590 ERCC3P19447 782 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 ABCD1P33897 745 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 SNIP1Q8TAD8 396 aaKnown RBP4.94□□□□□ -1.62
CD55-208ENST00000476590 SPTLC3Q9NUV7 552 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 RRBP1Q9P2E9 1410 aaKnown RBP4.94□□□□□ -1.62
CD55-208ENST00000476590 CCDC88BA6NC98 1476 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 CAND2O75155 1236 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 S1PR4O95977 384 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 SETSIPP0DME0 302 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 ZNF16P17020 682 aaPredicted RBP4.94□□□□□ -1.62
CD55-208ENST00000476590 RFX1P22670 979 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 MAGEA9P43362 315 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 NCBP1Q09161 790 aaKnown RBP4.94□□□□□ -1.62
CD55-208ENST00000476590 SMYD5Q6GMV2 418 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 SRLQ86TD4 932 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 RBM46Q8TBY0 533 aaKnown RBP4.94□□□□□ -1.62
CD55-208ENST00000476590 IRAK4Q9NWZ3 460 aa4.94□□□□□ -1.62
CD55-208ENST00000476590 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.94□□□□□ -1.628e-7■■■■□ 19.9
CD55-208ENST00000476590 PAX4O43316 350 aa4.93□□□□□ -1.62
CD55-208ENST00000476590 ADCY2Q08462 1091 aa4.93□□□□□ -1.62
CD55-208ENST00000476590 TRAF1Q13077 416 aa4.93□□□□□ -1.62
CD55-208ENST00000476590 KLHL40Q2TBA0 621 aa4.93□□□□□ -1.62
CD55-208ENST00000476590 TEX35Q5T0J7 233 aa4.93□□□□□ -1.62
CD55-208ENST00000476590 HDGFL1Q5TGJ6 251 aa4.93□□□□□ -1.62
CD55-208ENST00000476590 AP1ARQ63HQ0 302 aa4.93□□□□□ -1.62
CD55-208ENST00000476590 NME8Q8N427 588 aa4.93□□□□□ -1.62
CD55-208ENST00000476590 NFATC2IPQ8NCF5 419 aa4.93□□□□□ -1.62
CD55-208ENST00000476590 PROCA1Q8NCQ7 364 aaPredicted RBP4.93□□□□□ -1.62
CD55-208ENST00000476590 TATDN2Q93075 761 aa4.93□□□□□ -1.62
CD55-208ENST00000476590 ZFP64Q9NPA5 681 aa4.93□□□□□ -1.62
CD55-208ENST00000476590 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.93□□□□□ -1.629e-7■■■■■ 31.6
CD55-208ENST00000476590 ABCC9O60706 1549 aa4.93□□□□□ -1.62
CD55-208ENST00000476590 ARHGAP31Q2M1Z3 1444 aa4.93□□□□□ -1.62
CD55-208ENST00000476590 PLEKHG2Q9H7P9 1386 aa4.92□□□□□ -1.62
CD55-208ENST00000476590 POM121CA8CG34 1229 aa4.92□□□□□ -1.62
CD55-208ENST00000476590 TSR1Q2NL82 804 aaKnown RBP4.92□□□□□ -1.62
CD55-208ENST00000476590 MMS22LQ6ZRQ5 1243 aa4.92□□□□□ -1.62
CD55-208ENST00000476590 PACS2Q86VP3 889 aa4.92□□□□□ -1.62
CD55-208ENST00000476590 KIF1BPQ96EK5 621 aa4.92□□□□□ -1.62
CD55-208ENST00000476590 RYDENQ9NUL5 291 aaKnown RBP4.92□□□□□ -1.62
CD55-208ENST00000476590 RRP15Q9Y3B9 282 aaKnown RBP4.92□□□□□ -1.62
CD55-208ENST00000476590 GOLGA3Q08378 1498 aa4.92□□□□□ -1.62
CD55-208ENST00000476590 NCOA3Q9Y6Q9 1424 aa4.92□□□□□ -1.62
CD55-208ENST00000476590 RAB3GAP2Q9H2M9 1393 aa4.92□□□□□ -1.62
CD55-208ENST00000476590 KINO60870 393 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms