RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 C7orf43Q8WVR3 580 aa8.71□□□□□ -1.02
SDHB-205ENST00000475506 ZSCAN10Q96SZ4 725 aaPredicted RBP8.71□□□□□ -1.02
SDHB-205ENST00000475506 WASF2Q9Y6W5 498 aa8.71□□□□□ -1.02
SDHB-205ENST00000475506 J3QL48 77 aa8.7□□□□□ -1.02
SDHB-205ENST00000475506 ERCC5P28715 1186 aaPredicted RBP8.7□□□□□ -1.02
SDHB-205ENST00000475506 RAD51AP2Q09MP3 1159 aa8.7□□□□□ -1.02
SDHB-205ENST00000475506 ZNF697Q5TEC3 545 aa8.7□□□□□ -1.02
SDHB-205ENST00000475506 NLRP3Q96P20 1036 aa8.7□□□□□ -1.02
SDHB-205ENST00000475506 NIFKQ9BYG3 293 aaKnown RBP8.7□□□□□ -1.02
SDHB-205ENST00000475506 GGNBP2Q9H3C7 697 aa8.7□□□□□ -1.02
SDHB-205ENST00000475506 TIMP2P16035 220 aa8.69□□□□□ -1.02
SDHB-205ENST00000475506 WDR4P57081 412 aaKnown RBP8.69□□□□□ -1.02
SDHB-205ENST00000475506 ORC1Q13415 861 aa8.69□□□□□ -1.02
SDHB-205ENST00000475506 NAALADL2Q58DX5 795 aa8.69□□□□□ -1.02
SDHB-205ENST00000475506 TREML1Q86YW5 311 aa8.69□□□□□ -1.02
SDHB-205ENST00000475506 GPR152Q8TDT2 470 aa8.69□□□□□ -1.02
SDHB-205ENST00000475506 A6NHS1 94 aa8.68□□□□□ -1.02
SDHB-205ENST00000475506 SORBS3O60504 671 aa8.68□□□□□ -1.02
SDHB-205ENST00000475506 PSMD2Q13200 908 aa8.68□□□□□ -1.02
SDHB-205ENST00000475506 C1orf53Q5VUE5 145 aa8.68□□□□□ -1.02
SDHB-205ENST00000475506 ZNF598Q86UK7 904 aaKnown RBP8.68□□□□□ -1.02
SDHB-205ENST00000475506 SPNS2Q8IVW8 549 aa8.68□□□□□ -1.02
SDHB-205ENST00000475506 TMEM87AQ8NBN3 555 aa8.68□□□□□ -1.02
SDHB-205ENST00000475506 SNIP1Q8TAD8 396 aaKnown RBP8.68□□□□□ -1.02
SDHB-205ENST00000475506 SREK1Q8WXA9 508 aaKnown RBP8.68□□□□□ -1.02
SDHB-205ENST00000475506 GRIP2Q9C0E4 1043 aa8.68□□□□□ -1.02
SDHB-205ENST00000475506 BCL11AQ9H165 835 aa8.68□□□□□ -1.02
SDHB-205ENST00000475506 USP5P45974 858 aa8.67□□□□□ -1.02
SDHB-205ENST00000475506 ATP2B2Q01814 1243 aa8.67□□□□□ -1.02
SDHB-205ENST00000475506 C4orf17Q53FE4 359 aa8.67□□□□□ -1.02
SDHB-205ENST00000475506 TMEM214Q6NUQ4 689 aaKnown RBP8.67□□□□□ -1.02
SDHB-205ENST00000475506 RHBDD1Q8TEB9 315 aa8.67□□□□□ -1.02
SDHB-205ENST00000475506 NUDT16Q96DE0 195 aaKnown RBP8.67□□□□□ -1.02
SDHB-205ENST00000475506 MRS2Q9HD23 443 aa8.67□□□□□ -1.02
SDHB-205ENST00000475506 FGD1P98174 961 aa8.66□□□□□ -1.02
SDHB-205ENST00000475506 FANCCQ00597 558 aa8.66□□□□□ -1.02
SDHB-205ENST00000475506 NT5DC4Q86YG4 428 aa8.66□□□□□ -1.02
SDHB-205ENST00000475506 DRC1Q96MC2 740 aa8.66□□□□□ -1.02
SDHB-205ENST00000475506 CSRNP1Q96S65 589 aa8.66□□□□□ -1.02
SDHB-205ENST00000475506 VTI1BQ9UEU0 232 aa8.66□□□□□ -1.02
SDHB-205ENST00000475506 EIF1AYO14602 144 aaKnown RBP8.65□□□□□ -1.02
SDHB-205ENST00000475506 OPLAHO14841 1288 aa8.65□□□□□ -1.02
SDHB-205ENST00000475506 MICAL2O94851 1124 aa8.65□□□□□ -1.02
SDHB-205ENST00000475506 PLA2G4AP47712 749 aa8.65□□□□□ -1.02
SDHB-205ENST00000475506 ALG1LQ6GMV1 187 aa8.65□□□□□ -1.02
SDHB-205ENST00000475506 MEIOBQ8N635 442 aa8.65□□□□□ -1.02
SDHB-205ENST00000475506 ZNF280CQ8ND82 737 aa8.65□□□□□ -1.02
SDHB-205ENST00000475506 PIK3R5Q8WYR1 880 aa8.65□□□□□ -1.02
SDHB-205ENST00000475506 DMGDHQ9UI17 866 aaKnown RBP8.65□□□□□ -1.02
SDHB-205ENST00000475506 CTSHP09668 335 aa8.64□□□□□ -1.03
SDHB-205ENST00000475506 SMPD1P17405 629 aa8.64□□□□□ -1.03
SDHB-205ENST00000475506 GNA15P30679 374 aa8.64□□□□□ -1.03
SDHB-205ENST00000475506 IFFO2Q5TF58 517 aa8.64□□□□□ -1.03
SDHB-205ENST00000475506 INSM2Q96T92 566 aaPredicted RBP8.64□□□□□ -1.03
SDHB-205ENST00000475506 GDF9O60383 454 aa8.63□□□□□ -1.03
SDHB-205ENST00000475506 RNF144AP50876 292 aaPredicted RBP8.63□□□□□ -1.03
SDHB-205ENST00000475506 C8orf34Q49A92 452 aa8.63□□□□□ -1.03
SDHB-205ENST00000475506 TGFBR3LH3BV60 316 aa8.62□□□□□ -1.03
SDHB-205ENST00000475506 GPC1P35052 558 aa8.62□□□□□ -1.03
SDHB-205ENST00000475506 RHPN1Q8TCX5 695 aa8.62□□□□□ -1.03
SDHB-205ENST00000475506 FBF1Q8TES7 1133 aa8.62□□□□□ -1.03
SDHB-205ENST00000475506 HSH2DQ96JZ2 352 aa8.62□□□□□ -1.03
SDHB-205ENST00000475506 SUSD3Q96L08 255 aa8.62□□□□□ -1.03
SDHB-205ENST00000475506 METTL5Q9NRN9 209 aaKnown RBP8.62□□□□□ -1.03
SDHB-205ENST00000475506 TOR4AQ9NXH8 423 aa8.62□□□□□ -1.03
SDHB-205ENST00000475506 USP20Q9Y2K6 914 aa8.62□□□□□ -1.03
SDHB-205ENST00000475506 PHKA2P46019 1235 aa8.61□□□□□ -1.03
SDHB-205ENST00000475506 GNASQ5JWF2 1037 aa8.61□□□□□ -1.03
SDHB-205ENST00000475506 SLC27A3Q5K4L6 730 aa8.61□□□□□ -1.03
SDHB-205ENST00000475506 USPL1Q5W0Q7 1092 aa8.61□□□□□ -1.03
SDHB-205ENST00000475506 AIDAQ96BJ3 306 aa8.61□□□□□ -1.03
SDHB-205ENST00000475506 AK5Q9Y6K8 562 aa8.61□□□□□ -1.03
SDHB-205ENST00000475506 TTC24A2A3L6 582 aaPredicted RBP8.6□□□□□ -1.03
SDHB-205ENST00000475506 TNFRSF10AO00220 468 aa8.6□□□□□ -1.03
SDHB-205ENST00000475506 PCSK2P16519 638 aa8.6□□□□□ -1.03
SDHB-205ENST00000475506 ZNF76P36508 570 aa8.6□□□□□ -1.03
SDHB-205ENST00000475506 CTSOP43234 321 aaPredicted RBP8.6□□□□□ -1.03
SDHB-205ENST00000475506 PI16Q6UXB8 463 aa8.6□□□□□ -1.03
SDHB-205ENST00000475506 HPS1Q92902 700 aa8.6□□□□□ -1.03
SDHB-205ENST00000475506 RNF34Q969K3 372 aa8.6□□□□□ -1.03
SDHB-205ENST00000475506 ZDHHC3Q9NYG2 299 aa8.6□□□□□ -1.03
SDHB-205ENST00000475506 FOXD3Q9UJU5 478 aaPredicted RBP8.6□□□□□ -1.03
SDHB-205ENST00000475506 SPATA31C2B4DYI2 1134 aa8.59□□□□□ -1.03
SDHB-205ENST00000475506 SPINT1O43278 529 aa8.59□□□□□ -1.03
SDHB-205ENST00000475506 ATP4AP20648 1035 aa8.59□□□□□ -1.03
SDHB-205ENST00000475506 GTF2E1P29083 439 aaPredicted RBP8.59□□□□□ -1.03
SDHB-205ENST00000475506 IDH3AP50213 366 aa8.59□□□□□ -1.03
SDHB-205ENST00000475506 TRIP4Q15650 581 aaPredicted RBP8.59□□□□□ -1.03
SDHB-205ENST00000475506 CYP4X1Q8N118 509 aa8.59□□□□□ -1.03
SDHB-205ENST00000475506 TINF2Q9BSI4 451 aa8.59□□□□□ -1.03
SDHB-205ENST00000475506 DNAJC25Q9H1X3 360 aa8.59□□□□□ -1.03
SDHB-205ENST00000475506 PPP1R1BQ9UD71 204 aaPredicted RBP8.59□□□□□ -1.03
SDHB-205ENST00000475506 GRNP28799 593 aaKnown RBP8.58□□□□□ -1.04
SDHB-205ENST00000475506 INPP5BP32019 993 aa8.58□□□□□ -1.04
SDHB-205ENST00000475506 IRS1P35568 1242 aa8.58□□□□□ -1.04
SDHB-205ENST00000475506 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.58□□□□□ -1.04
SDHB-205ENST00000475506 IER5Q5VY09 327 aa8.58□□□□□ -1.04
SDHB-205ENST00000475506 TRIM67Q6ZTA4 783 aa8.58□□□□□ -1.04
SDHB-205ENST00000475506 CPNE3O75131 537 aaKnown RBP8.57□□□□□ -1.04
SDHB-205ENST00000475506 TNFRSF21O75509 655 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms