RNA–Protein interactions for RNA: ENST00000475432.6

HIF3A-207, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-207ENST00000475432 ZBTB1Q9Y2K1 713 aa22.6■■□□□ 1.21
HIF3A-207ENST00000475432 NEURL1BA8MQ27 555 aa22.6■■□□□ 1.21
HIF3A-207ENST00000475432 ITPK1Q13572 414 aa22.6■■□□□ 1.21
HIF3A-207ENST00000475432 GCC1Q96CN9 775 aa22.6■■□□□ 1.21
HIF3A-207ENST00000475432 C9orf78Q9NZ63 289 aaPredicted RBP22.6■■□□□ 1.21
HIF3A-207ENST00000475432 IBTKQ9P2D0 1353 aaPredicted RBP22.59■■□□□ 1.21
HIF3A-207ENST00000475432 NHSQ6T4R5 1651 aa22.59■■□□□ 1.21
HIF3A-207ENST00000475432 ZBTB3Q9H5J0 574 aa22.58■■□□□ 1.21
HIF3A-207ENST00000475432 KRT27Q7Z3Y8 459 aa22.58■■□□□ 1.2
HIF3A-207ENST00000475432 GRM8O00222 908 aa22.57■■□□□ 1.2
HIF3A-207ENST00000475432 RGS3P49796 1198 aa22.57■■□□□ 1.2
HIF3A-207ENST00000475432 GCKRQ14397 625 aa22.57■■□□□ 1.2
HIF3A-207ENST00000475432 UTYO14607 1347 aa22.57■■□□□ 1.2
HIF3A-207ENST00000475432 HMMRO75330 724 aa22.57■■□□□ 1.2
HIF3A-207ENST00000475432 CRKLP46109 303 aaKnown RBP22.57■■□□□ 1.2
HIF3A-207ENST00000475432 DCTPP1Q9H773 170 aa22.57■■□□□ 1.2
HIF3A-207ENST00000475432 CCDC87Q9NVE4 849 aa22.57■■□□□ 1.2
HIF3A-207ENST00000475432 CICQ96RK0 1608 aaPredicted RBP22.56■■□□□ 1.2
HIF3A-207ENST00000475432 IL6STP40189 918 aaPredicted RBP22.56■■□□□ 1.2
HIF3A-207ENST00000475432 ATP8B2P98198 1209 aa22.56■■□□□ 1.2
HIF3A-207ENST00000475432 INTS5Q6P9B9 1019 aaKnown RBP22.56■■□□□ 1.2
HIF3A-207ENST00000475432 ARFGEF2Q9Y6D5 1785 aa22.55■■□□□ 1.2
HIF3A-207ENST00000475432 ATP5J2-PTCD1G3V325 749 aa22.55■■□□□ 1.2
HIF3A-207ENST00000475432 NUCB1Q02818 461 aa22.55■■□□□ 1.2
HIF3A-207ENST00000475432 KIF6Q6ZMV9 814 aa22.55■■□□□ 1.2
HIF3A-207ENST00000475432 PNMA6EA0A0J9YXQ4 647 aa22.54■■□□□ 1.2
HIF3A-207ENST00000475432 FAM196AQ6ZSG2 479 aa22.54■■□□□ 1.2
HIF3A-207ENST00000475432 HDAC5Q9UQL6 1122 aa22.54■■□□□ 1.2
HIF3A-207ENST00000475432 BCL11BQ9C0K0 894 aaPredicted RBP22.53■■□□□ 1.2
HIF3A-207ENST00000475432 ARXQ96QS3 562 aa22.53■■□□□ 1.2
HIF3A-207ENST00000475432 MAP3K15Q6ZN16 1313 aa22.53■■□□□ 1.2
HIF3A-207ENST00000475432 BTAF1O14981 1849 aa22.53■■□□□ 1.2
HIF3A-207ENST00000475432 NUP188Q5SRE5 1749 aa22.52■■□□□ 1.2
HIF3A-207ENST00000475432 EIF5P55010 431 aaKnown RBP22.52■■□□□ 1.2
HIF3A-207ENST00000475432 NPM2Q86SE8 214 aaKnown RBP22.52■■□□□ 1.2
HIF3A-207ENST00000475432 ZNF831Q5JPB2 1677 aa22.52■■□□□ 1.2
HIF3A-207ENST00000475432 ANKRD45Q5TZF3 282 aa22.52■■□□□ 1.19
HIF3A-207ENST00000475432 CHD1LQ86WJ1 897 aa22.52■■□□□ 1.19
HIF3A-207ENST00000475432 RXRBP28702 533 aa22.51■■□□□ 1.19
HIF3A-207ENST00000475432 KCNQ4P56696 695 aa22.51■■□□□ 1.19
HIF3A-207ENST00000475432 LINC00116Q8NCU8 138 aa22.51■■□□□ 1.19
HIF3A-207ENST00000475432 PPP1R42Q7Z4L9 355 aa22.5■■□□□ 1.19
HIF3A-207ENST00000475432 SSH3Q8TE77 659 aa22.5■■□□□ 1.19
HIF3A-207ENST00000475432 SUCLG2Q96I99 432 aa22.5■■□□□ 1.19
HIF3A-207ENST00000475432 TCIRG1Q13488 830 aa22.5■■□□□ 1.19
HIF3A-207ENST00000475432 KAZALD1Q96I82 304 aa22.5■■□□□ 1.19
HIF3A-207ENST00000475432 TSHZ2Q9NRE2 1034 aa22.5■■□□□ 1.19
HIF3A-207ENST00000475432 RGS17Q9UGC6 210 aaPredicted RBP22.5■■□□□ 1.19
HIF3A-207ENST00000475432 SBF2Q86WG5 1849 aa22.49■■□□□ 1.19
HIF3A-207ENST00000475432 A0A087WZG4 1122 aa22.49■■□□□ 1.19
HIF3A-207ENST00000475432 GIGYF2Q6Y7W6 1299 aaKnown RBP22.49■■□□□ 1.19
HIF3A-207ENST00000475432 DZIP3Q86Y13 1208 aaKnown RBP22.49■■□□□ 1.19
HIF3A-207ENST00000475432 CCDC191Q8NCU4 936 aa22.49■■□□□ 1.19
HIF3A-207ENST00000475432 LNPKQ9C0E8 428 aa22.49■■□□□ 1.19
HIF3A-207ENST00000475432 CWC25Q9NXE8 425 aaPredicted RBP22.49■■□□□ 1.19
HIF3A-207ENST00000475432 BRWD3Q6RI45 1802 aa22.49■■□□□ 1.19
HIF3A-207ENST00000475432 SRGAP3O43295 1099 aa22.48■■□□□ 1.19
HIF3A-207ENST00000475432 PDE4AP27815 886 aa22.48■■□□□ 1.19
HIF3A-207ENST00000475432 MTX1Q13505 466 aa22.48■■□□□ 1.19
HIF3A-207ENST00000475432 POLA2Q14181 598 aa22.48■■□□□ 1.19
HIF3A-207ENST00000475432 ISCA1Q9BUE6 129 aa22.48■■□□□ 1.19
HIF3A-207ENST00000475432 CCNL1Q9UK58 526 aaPredicted RBP22.48■■□□□ 1.19
HIF3A-207ENST00000475432 TBC1D2BQ9UPU7 963 aa22.48■■□□□ 1.19
HIF3A-207ENST00000475432 RREB1Q92766 1687 aa22.48■■□□□ 1.19
HIF3A-207ENST00000475432 HLFQ16534 295 aa22.48■■□□□ 1.19
HIF3A-207ENST00000475432 UBE3BQ7Z3V4 1068 aa22.48■■□□□ 1.19
HIF3A-207ENST00000475432 EP400Q96L91 3159 aa22.47■■□□□ 1.19
HIF3A-207ENST00000475432 ERVV-1B6SEH8 477 aa22.47■■□□□ 1.19
HIF3A-207ENST00000475432 CNTNAP4Q9C0A0 1308 aa22.47■■□□□ 1.19
HIF3A-207ENST00000475432 TRIM28Q13263 835 aaKnown RBP22.47■■□□□ 1.19
HIF3A-207ENST00000475432 JARID2Q92833 1246 aaPredicted RBP22.47■■□□□ 1.19
HIF3A-207ENST00000475432 BICC1Q9H694 974 aaKnown RBP22.47■■□□□ 1.19
HIF3A-207ENST00000475432 COL5A3P25940 1745 aaPredicted RBP22.46■■□□□ 1.19
HIF3A-207ENST00000475432 CASP7P55210 303 aa22.46■■□□□ 1.19
HIF3A-207ENST00000475432 H7C1W4 665 aa22.45■■□□□ 1.18
HIF3A-207ENST00000475432 EXOC6BQ9Y2D4 811 aa22.45■■□□□ 1.18
HIF3A-207ENST00000475432 TRIM37O94972 964 aa22.45■■□□□ 1.18
HIF3A-207ENST00000475432 HSP90AB3PQ58FF7 597 aa22.45■■□□□ 1.18
HIF3A-207ENST00000475432 COL15A1P39059 1388 aa22.44■■□□□ 1.18
HIF3A-207ENST00000475432 POTEAQ6S8J7 498 aa22.44■■□□□ 1.18
HIF3A-207ENST00000475432 MYH14Q7Z406 1995 aaKnown RBP22.44■■□□□ 1.18
HIF3A-207ENST00000475432 APBB1O00213 710 aa22.43■■□□□ 1.18
HIF3A-207ENST00000475432 EPHA10Q5JZY3 1008 aa22.43■■□□□ 1.18
HIF3A-207ENST00000475432 RC3H1Q5TC82 1133 aaKnown RBP22.43■■□□□ 1.18
HIF3A-207ENST00000475432 AFDNP55196 1824 aaKnown RBP22.43■■□□□ 1.18
HIF3A-207ENST00000475432 ZBTB47Q9UFB7 747 aaPredicted RBP22.43■■□□□ 1.18
HIF3A-207ENST00000475432 CAMTA2O94983 1202 aa22.41■■□□□ 1.18
HIF3A-207ENST00000475432 LY75O60449 1722 aa22.41■■□□□ 1.18
HIF3A-207ENST00000475432 GPTP24298 496 aa22.41■■□□□ 1.18
HIF3A-207ENST00000475432 RTL5Q5HYW3 569 aaPredicted RBP22.41■■□□□ 1.18
HIF3A-207ENST00000475432 SURF6O75683 361 aaKnown RBP22.4■■□□□ 1.18
HIF3A-207ENST00000475432 NLRP10Q86W26 655 aa22.4■■□□□ 1.18
HIF3A-207ENST00000475432 SMARCA5O60264 1052 aaPredicted RBP22.4■■□□□ 1.18
HIF3A-207ENST00000475432 RABL6Q3YEC7 729 aaPredicted RBP22.4■■□□□ 1.18
HIF3A-207ENST00000475432 ZNF34Q8IZ26 560 aa22.39■■□□□ 1.17
HIF3A-207ENST00000475432 LRRCC1Q9C099 1032 aa22.39■■□□□ 1.17
HIF3A-207ENST00000475432 LRRC4BQ9NT99 713 aa22.39■■□□□ 1.17
HIF3A-207ENST00000475432 RPS6KA4O75676 772 aa22.38■■□□□ 1.17
HIF3A-207ENST00000475432 GNPATO15228 680 aa22.38■■□□□ 1.17
HIF3A-207ENST00000475432 PCCAP05165 728 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms