RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 TEX13AQ9BXU3 409 aaPredicted RBP12.75□□□□□ -0.37
PCCB-213ENST00000475214 HDAC5Q9UQL6 1122 aa12.75□□□□□ -0.37
PCCB-213ENST00000475214 KCPQ6ZWJ8 1503 aa12.74□□□□□ -0.37
PCCB-213ENST00000475214 PTCD1O75127 700 aaKnown RBP12.74□□□□□ -0.37
PCCB-213ENST00000475214 ANKRD45Q5TZF3 282 aa12.74□□□□□ -0.37
PCCB-213ENST00000475214 RIC3Q7Z5B4 369 aa12.74□□□□□ -0.37
PCCB-213ENST00000475214 XAGE3Q8WTP9 111 aa12.74□□□□□ -0.37
PCCB-213ENST00000475214 PIGBQ92521 554 aa12.74□□□□□ -0.37
PCCB-213ENST00000475214 USP44Q9H0E7 712 aa12.74□□□□□ -0.37
PCCB-213ENST00000475214 DCTPP1Q9H773 170 aa12.74□□□□□ -0.37
PCCB-213ENST00000475214 STK32BQ9NY57 414 aa12.74□□□□□ -0.37
PCCB-213ENST00000475214 ITGB4P16144 1822 aa12.74□□□□□ -0.37
PCCB-213ENST00000475214 DCAF8L1A6NGE4 600 aa12.73□□□□□ -0.37
PCCB-213ENST00000475214 ATP8B2P98198 1209 aa12.73□□□□□ -0.37
PCCB-213ENST00000475214 NEXNQ0ZGT2 675 aa12.73□□□□□ -0.37
PCCB-213ENST00000475214 TXNRD1Q16881 649 aa12.73□□□□□ -0.37
PCCB-213ENST00000475214 COPS6Q7L5N1 327 aa12.73□□□□□ -0.37
PCCB-213ENST00000475214 VSIG10Q8N0Z9 540 aa12.73□□□□□ -0.37
PCCB-213ENST00000475214 LINS1Q8NG48 757 aa12.73□□□□□ -0.37
PCCB-213ENST00000475214 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
PCCB-213ENST00000475214 PTF1AQ7RTS3 328 aa12.72□□□□□ -0.37
PCCB-213ENST00000475214 ANO8Q9HCE9 1232 aaPredicted RBP12.72□□□□□ -0.37
PCCB-213ENST00000475214 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
PCCB-213ENST00000475214 HMGB2P26583 209 aaKnown RBP12.71□□□□□ -0.37
PCCB-213ENST00000475214 PROM2Q8N271 834 aa12.71□□□□□ -0.37
PCCB-213ENST00000475214 SYTL4Q96C24 671 aaPredicted RBP12.71□□□□□ -0.37
PCCB-213ENST00000475214 ACSBG1Q96GR2 724 aa12.71□□□□□ -0.37
PCCB-213ENST00000475214 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
PCCB-213ENST00000475214 LNPKQ9C0E8 428 aa12.71□□□□□ -0.37
PCCB-213ENST00000475214 C9orf78Q9NZ63 289 aaPredicted RBP12.71□□□□□ -0.37
PCCB-213ENST00000475214 ASAP1Q9ULH1 1129 aa12.71□□□□□ -0.37
PCCB-213ENST00000475214 LRRFIP2Q9Y608 721 aaKnown RBP12.71□□□□□ -0.37
PCCB-213ENST00000475214 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
PCCB-213ENST00000475214 LRP10Q7Z4F1 713 aa12.7□□□□□ -0.38
PCCB-213ENST00000475214 METTL22Q9BUU2 404 aaPredicted RBP12.7□□□□□ -0.38
PCCB-213ENST00000475214 NHSQ6T4R5 1651 aa12.7□□□□□ -0.38
PCCB-213ENST00000475214 IBTKQ9P2D0 1353 aaPredicted RBP12.69□□□□□ -0.38
PCCB-213ENST00000475214 DOT1LQ8TEK3 1739 aa12.69□□□□□ -0.38
PCCB-213ENST00000475214 STARD3NLO95772 234 aa12.69□□□□□ -0.38
PCCB-213ENST00000475214 PIP4K2AP48426 406 aaPredicted RBP12.69□□□□□ -0.38
PCCB-213ENST00000475214 SLC15A2Q16348 729 aa12.69□□□□□ -0.38
PCCB-213ENST00000475214 C8orf34Q49A92 452 aa12.69□□□□□ -0.38
PCCB-213ENST00000475214 PLBD2Q8NHP8 589 aa12.69□□□□□ -0.38
PCCB-213ENST00000475214 PDGFDQ9GZP0 370 aaPredicted RBP12.69□□□□□ -0.38
PCCB-213ENST00000475214 KAT6BQ8WYB5 2073 aa12.69□□□□□ -0.38
PCCB-213ENST00000475214 NBPF26B4DH59 902 aa12.68□□□□□ -0.38
PCCB-213ENST00000475214 GRM8O00222 908 aa12.68□□□□□ -0.38
PCCB-213ENST00000475214 A1BGP04217 495 aa12.68□□□□□ -0.38
PCCB-213ENST00000475214 NBPF7P0C2Y1 421 aaPredicted RBP12.68□□□□□ -0.38
PCCB-213ENST00000475214 CWF19L2Q2TBE0 894 aaKnown RBP12.68□□□□□ -0.38
PCCB-213ENST00000475214 SLC27A3Q5K4L6 730 aa12.68□□□□□ -0.38
PCCB-213ENST00000475214 NBPF10Q6P3W6 841 aaKnown RBP12.68□□□□□ -0.38
PCCB-213ENST00000475214 NBPF15Q8N660 670 aa12.68□□□□□ -0.38
PCCB-213ENST00000475214 MYD88Q99836 296 aa12.68□□□□□ -0.38
PCCB-213ENST00000475214 PTGER2P43116 358 aa12.67□□□□□ -0.38
PCCB-213ENST00000475214 DNAJC10Q8IXB1 793 aa12.67□□□□□ -0.38
PCCB-213ENST00000475214 SSH3Q8TE77 659 aa12.67□□□□□ -0.38
PCCB-213ENST00000475214 UTYO14607 1347 aa12.66□□□□□ -0.38
PCCB-213ENST00000475214 PNMA6EA0A0J9YXQ4 647 aa12.66□□□□□ -0.38
PCCB-213ENST00000475214 NEURL1BA8MQ27 555 aa12.66□□□□□ -0.38
PCCB-213ENST00000475214 ZBTB7AO95365 584 aa12.66□□□□□ -0.38
PCCB-213ENST00000475214 IGKV5-2P06315 115 aa12.66□□□□□ -0.38
PCCB-213ENST00000475214 ANP32AP39687 249 aaKnown RBP12.66□□□□□ -0.38
PCCB-213ENST00000475214 PPP1R42Q7Z4L9 355 aa12.66□□□□□ -0.38
PCCB-213ENST00000475214 ARFGEF2Q9Y6D5 1785 aa12.66□□□□□ -0.38
PCCB-213ENST00000475214 SRGAP3O43295 1099 aa12.65□□□□□ -0.38
PCCB-213ENST00000475214 RAB11FIP3O75154 756 aa12.65□□□□□ -0.38
PCCB-213ENST00000475214 POLA2Q14181 598 aa12.65□□□□□ -0.38
PCCB-213ENST00000475214 GCKRQ14397 625 aa12.65□□□□□ -0.38
PCCB-213ENST00000475214 HSP90AB4PQ58FF6 505 aa12.65□□□□□ -0.38
PCCB-213ENST00000475214 SMARCC1Q92922 1105 aaPredicted RBP12.65□□□□□ -0.38
PCCB-213ENST00000475214 MTFR1LQ9H019 292 aa12.65□□□□□ -0.38
PCCB-213ENST00000475214 APBB1O00213 710 aa12.64□□□□□ -0.39
PCCB-213ENST00000475214 MTX1Q13505 466 aa12.64□□□□□ -0.39
PCCB-213ENST00000475214 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
PCCB-213ENST00000475214 TTLL7Q6ZT98 887 aa12.64□□□□□ -0.39
PCCB-213ENST00000475214 LRRCC1Q9C099 1032 aa12.64□□□□□ -0.39
PCCB-213ENST00000475214 EXOC6BQ9Y2D4 811 aa12.64□□□□□ -0.39
PCCB-213ENST00000475214 AFDNP55196 1824 aaKnown RBP12.64□□□□□ -0.39
PCCB-213ENST00000475214 CYP19A1P11511 503 aaPredicted RBP12.63□□□□□ -0.39
PCCB-213ENST00000475214 BMP2KLQ5H9B9 411 aa12.63□□□□□ -0.39
PCCB-213ENST00000475214 NPM2Q86SE8 214 aaKnown RBP12.63□□□□□ -0.39
PCCB-213ENST00000475214 PLEKHM2Q8IWE5 1019 aa12.63□□□□□ -0.39
PCCB-213ENST00000475214 SLC16A10Q8TF71 515 aa12.63□□□□□ -0.39
PCCB-213ENST00000475214 SUCLG2Q96I99 432 aa12.63□□□□□ -0.39
PCCB-213ENST00000475214 ATF5Q9Y2D1 282 aaPredicted RBP12.63□□□□□ -0.39
PCCB-213ENST00000475214 ZNF330Q9Y3S2 320 aaPredicted RBP12.63□□□□□ -0.39
PCCB-213ENST00000475214 BTAF1O14981 1849 aa12.62□□□□□ -0.39
PCCB-213ENST00000475214 SMARCA5O60264 1052 aaPredicted RBP12.62□□□□□ -0.39
PCCB-213ENST00000475214 SURF6O75683 361 aaKnown RBP12.62□□□□□ -0.39
PCCB-213ENST00000475214 SGIP1Q9BQI5 828 aa12.62□□□□□ -0.39
PCCB-213ENST00000475214 ZBTB3Q9H5J0 574 aa12.62□□□□□ -0.39
PCCB-213ENST00000475214 CWC25Q9NXE8 425 aaPredicted RBP12.62□□□□□ -0.39
PCCB-213ENST00000475214 A0A087WZG4 1122 aa12.61□□□□□ -0.39
PCCB-213ENST00000475214 ATP5J2-PTCD1G3V325 749 aa12.61□□□□□ -0.39
PCCB-213ENST00000475214 ATP6V1AP38606 617 aa12.61□□□□□ -0.39
PCCB-213ENST00000475214 ZNF784Q8NCA9 323 aaPredicted RBP12.61□□□□□ -0.39
PCCB-213ENST00000475214 CCDC191Q8NCU4 936 aa12.61□□□□□ -0.39
PCCB-213ENST00000475214 SLC4A9Q96Q91 983 aa12.61□□□□□ -0.39
PCCB-213ENST00000475214 SYT17Q9BSW7 474 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms