RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 FBXO38Q6PIJ6 1188 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 TMX3Q96JJ7 454 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 CHAMP1Q96JM3 812 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 TSPYL1Q9H0U9 437 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 IFT57Q9NWB7 429 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 KNSTRNQ9Y448 316 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 PAXBP1Q9Y5B6 917 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 FAM237AA0A1B0GTK4 181 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 SYCE3A1L190 88 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 SMARCA5O60264 1052 aaPredicted RBP4.97□□□□□ -1.61
USP16-205ENST00000474835 SASH3O75995 380 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 MCM2P49736 904 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 CCDC183Q5T5S1 534 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 RPAINQ86UA6 219 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 CHMP4BQ9H444 224 aaKnown RBP4.97□□□□□ -1.61
USP16-205ENST00000474835 RGPD5Q99666 1765 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 SLX4Q8IY92 1834 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 SDSP20132 328 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 NBPF6Q5VWK0 638 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 FBXL16Q8N461 479 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 ZNF397Q8NF99 534 aaPredicted RBP4.97□□□□□ -1.61
USP16-205ENST00000474835 NBPF4Q96M43 638 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 ZSCAN16Q9H4T2 348 aaPredicted RBP4.97□□□□□ -1.61
USP16-205ENST00000474835 DIP2BQ9P265 1576 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 MYH7BA7E2Y1 1941 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 BHMG1C9JSJ3 638 aaPredicted RBP4.97□□□□□ -1.61
USP16-205ENST00000474835 SGSM2O43147 1006 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 TBC1D8O95759 1140 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 MSNP26038 577 aaKnown RBP4.97□□□□□ -1.61
USP16-205ENST00000474835 CCDC144BQ3MJ40 725 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 ZSCAN25Q6NSZ9 544 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 CCDC144CPQ8IYA2 1237 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 HNRNPLLQ8WVV9 542 aaKnown RBP4.97□□□□□ -1.61
USP16-205ENST00000474835 MRFAP1L1Q96HT8 127 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 CARD10Q9BWT7 1032 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 BRMS1Q9HCU9 246 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 PALD1Q9ULE6 856 aa4.97□□□□□ -1.61
USP16-205ENST00000474835 MAP3K5Q99683 1374 aa4.96□□□□□ -1.61
USP16-205ENST00000474835 RGPD3A6NKT7 1758 aaPredicted RBP4.96□□□□□ -1.61
USP16-205ENST00000474835 RGPD4Q7Z3J3 1758 aa4.96□□□□□ -1.61
USP16-205ENST00000474835 ADCY5O95622 1261 aa4.96□□□□□ -1.61
USP16-205ENST00000474835 GUCY2CP25092 1073 aa4.96□□□□□ -1.61
USP16-205ENST00000474835 IL13P35225 146 aa4.96□□□□□ -1.61
USP16-205ENST00000474835 EXOSC9Q06265 439 aaKnown RBP4.96□□□□□ -1.61
USP16-205ENST00000474835 POLA2Q14181 598 aa4.96□□□□□ -1.61
USP16-205ENST00000474835 WDR43Q15061 677 aaKnown RBP eCLIP4.96□□□□□ -1.61
USP16-205ENST00000474835 UTP14AQ9BVJ6 771 aaKnown RBP4.96□□□□□ -1.61
USP16-205ENST00000474835 SRCIN1Q9C0H9 1055 aa4.96□□□□□ -1.61
USP16-205ENST00000474835 RAB21Q9UL25 225 aa4.96□□□□□ -1.61
USP16-205ENST00000474835 RFX7Q2KHR2 1363 aa4.96□□□□□ -1.62
USP16-205ENST00000474835 MED23Q9ULK4 1368 aa4.96□□□□□ -1.62
USP16-205ENST00000474835 USP48Q86UV5 1035 aa4.96□□□□□ -1.62
USP16-205ENST00000474835 LRRN4CLQ8ND94 238 aa4.96□□□□□ -1.62
USP16-205ENST00000474835 ENGASEQ8NFI3 743 aa4.96□□□□□ -1.62
USP16-205ENST00000474835 LSG1Q9H089 658 aaKnown RBP4.96□□□□□ -1.62
USP16-205ENST00000474835 DDX60LQ5H9U9 1706 aaKnown RBP4.96□□□□□ -1.62
USP16-205ENST00000474835 MYH8P13535 1937 aa4.96□□□□□ -1.62
USP16-205ENST00000474835 DHX16O60231 1041 aaKnown RBP4.96□□□□□ -1.62
USP16-205ENST00000474835 UBE2HP62256 183 aa4.96□□□□□ -1.62
USP16-205ENST00000474835 CBX1P83916 185 aa4.96□□□□□ -1.62
USP16-205ENST00000474835 PI4K2BQ8TCG2 481 aa4.96□□□□□ -1.62
USP16-205ENST00000474835 KIFC2Q96AC6 838 aa4.96□□□□□ -1.62
USP16-205ENST00000474835 JPH4Q96JJ6 628 aa4.96□□□□□ -1.62
USP16-205ENST00000474835 LCMT1Q9UIC8 334 aa4.96□□□□□ -1.62
USP16-205ENST00000474835 MAP3K15Q6ZN16 1313 aa4.96□□□□□ -1.62
USP16-205ENST00000474835 GNAI3P08754 354 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 HNRNPH2P55795 449 aaKnown RBP4.95□□□□□ -1.62
USP16-205ENST00000474835 DHX40Q8IX18 779 aaKnown RBP4.95□□□□□ -1.62
USP16-205ENST00000474835 C17orf53Q8N3J3 647 aaPredicted RBP4.95□□□□□ -1.62
USP16-205ENST00000474835 TM6SF1Q9BZW5 370 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 DDX49Q9Y6V7 483 aaKnown RBP4.95□□□□□ -1.62
USP16-205ENST00000474835 TNRC6CQ9HCJ0 1690 aaKnown RBP4.95□□□□□ -1.62
USP16-205ENST00000474835 TBX2Q13207 712 aaPredicted RBP4.95□□□□□ -1.62
USP16-205ENST00000474835 SNW1Q13573 536 aaKnown RBP4.95□□□□□ -1.62
USP16-205ENST00000474835 ZNF326Q5BKZ1 582 aaKnown RBP4.95□□□□□ -1.62
USP16-205ENST00000474835 ERO1AQ96HE7 468 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 AGXT2Q9BYV1 514 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 UPF2Q9HAU5 1272 aaKnown RBP4.95□□□□□ -1.62
USP16-205ENST00000474835 MTMR6Q9Y217 621 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 SBF2Q86WG5 1849 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 TADA3O75528 432 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 ZNF75DP51815 510 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 NAA30Q147X3 362 aaPredicted RBP4.95□□□□□ -1.62
USP16-205ENST00000474835 E4F1Q66K89 784 aaPredicted RBP4.95□□□□□ -1.62
USP16-205ENST00000474835 MCTP1Q6DN14 999 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 CEP120Q8N960 986 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 TRIM44Q96DX7 344 aaPredicted RBP4.95□□□□□ -1.62
USP16-205ENST00000474835 ESYT1Q9BSJ8 1104 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 DUOX1Q9NRD9 1551 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 PHLPP2Q6ZVD8 1323 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 ROBO1Q9Y6N7 1651 aa4.95□□□□□ -1.62
USP16-205ENST00000474835 USP27XA6NNY8 438 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 FCHSD2O94868 740 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 PRPF6O94906 941 aaKnown RBP4.94□□□□□ -1.62
USP16-205ENST00000474835 PNMA6AP0CW24 399 aaPredicted RBP4.94□□□□□ -1.62
USP16-205ENST00000474835 ARID5BQ14865 1188 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 SRLQ86TD4 932 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 BORCS6Q96GS4 357 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 TIGD1Q96MW7 591 aa4.94□□□□□ -1.62
USP16-205ENST00000474835 TTC12Q9H892 705 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms