RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 NEXNQ0ZGT2 675 aa22.32■■□□□ 1.16
VARS2-206ENST00000473916 GCKRQ14397 625 aa22.32■■□□□ 1.16
VARS2-206ENST00000473916 TTC22Q5TAA0 569 aa22.32■■□□□ 1.16
VARS2-206ENST00000473916 TSHZ3Q63HK5 1081 aa22.32■■□□□ 1.16
VARS2-206ENST00000473916 SLC4A9Q96Q91 983 aa22.32■■□□□ 1.16
VARS2-206ENST00000473916 LRRCC1Q9C099 1032 aa22.32■■□□□ 1.16
VARS2-206ENST00000473916 UTYO14607 1347 aa22.32■■□□□ 1.16
VARS2-206ENST00000473916 ERBB4Q15303 1308 aa22.32■■□□□ 1.16
VARS2-206ENST00000473916 BCL9LQ86UU0 1499 aa22.31■■□□□ 1.16
VARS2-206ENST00000473916 MARCH10Q8NA82 808 aaPredicted RBP22.31■■□□□ 1.16
VARS2-206ENST00000473916 NOP58Q9Y2X3 529 aaKnown RBP22.31■■□□□ 1.16
VARS2-206ENST00000473916 SURF6O75683 361 aaKnown RBP22.31■■□□□ 1.16
VARS2-206ENST00000473916 PLBD2Q8NHP8 589 aa22.31■■□□□ 1.16
VARS2-206ENST00000473916 NGLY1Q96IV0 654 aa22.3■■□□□ 1.16
VARS2-206ENST00000473916 CDCA7Q9BWT1 371 aaPredicted RBP22.3■■□□□ 1.16
VARS2-206ENST00000473916 BICC1Q9H694 974 aaKnown RBP22.3■■□□□ 1.16
VARS2-206ENST00000473916 IL1RAPL2Q9NP60 686 aa22.3■■□□□ 1.16
VARS2-206ENST00000473916 TUBGCP6Q96RT7 1819 aa22.3■■□□□ 1.16
VARS2-206ENST00000473916 A0A0G2JS52 829 aa22.3■■□□□ 1.16
VARS2-206ENST00000473916 UNC5CLQ8IV45 518 aa22.3■■□□□ 1.16
VARS2-206ENST00000473916 CERKQ8TCT0 537 aa22.3■■□□□ 1.16
VARS2-206ENST00000473916 ACSBG1Q96GR2 724 aa22.3■■□□□ 1.16
VARS2-206ENST00000473916 SALL3Q9BXA9 1300 aa22.29■■□□□ 1.16
VARS2-206ENST00000473916 ZBTB3Q9H5J0 574 aa22.29■■□□□ 1.16
VARS2-206ENST00000473916 MTX1Q13505 466 aa22.28■■□□□ 1.16
VARS2-206ENST00000473916 AEBP2Q6ZN18 517 aaPredicted RBP22.28■■□□□ 1.16
VARS2-206ENST00000473916 TBC1D9Q6ZT07 1266 aa22.28■■□□□ 1.16
VARS2-206ENST00000473916 TBC1D32Q96NH3 1257 aa22.28■■□□□ 1.16
VARS2-206ENST00000473916 ZNF330Q9Y3S2 320 aaPredicted RBP22.28■■□□□ 1.16
VARS2-206ENST00000473916 TJP1Q07157 1748 aa22.28■■□□□ 1.16
VARS2-206ENST00000473916 FAM98CQ17RN3 349 aaKnown RBP22.28■■□□□ 1.16
VARS2-206ENST00000473916 EPHA10Q5JZY3 1008 aa22.28■■□□□ 1.16
VARS2-206ENST00000473916 PA2G4Q9UQ80 394 aaKnown RBP22.28■■□□□ 1.16
VARS2-206ENST00000473916 SLC4A3P48751 1232 aa22.27■■□□□ 1.16
VARS2-206ENST00000473916 PDE1AP54750 535 aa22.27■■□□□ 1.16
VARS2-206ENST00000473916 BARGINQ6ZT62 677 aa22.27■■□□□ 1.16
VARS2-206ENST00000473916 VSIG10Q8N0Z9 540 aa22.26■■□□□ 1.15
VARS2-206ENST00000473916 UBE3BQ7Z3V4 1068 aa22.25■■□□□ 1.15
VARS2-206ENST00000473916 RHPN1Q8TCX5 695 aa22.25■■□□□ 1.15
VARS2-206ENST00000473916 UPF2Q9HAU5 1272 aaKnown RBP22.25■■□□□ 1.15
VARS2-206ENST00000473916 SDSP20132 328 aa22.24■■□□□ 1.15
VARS2-206ENST00000473916 NUTM1Q86Y26 1132 aa22.24■■□□□ 1.15
VARS2-206ENST00000473916 MX1P20591 662 aa22.23■■□□□ 1.15
VARS2-206ENST00000473916 DDRGK1Q96HY6 314 aa22.23■■□□□ 1.15
VARS2-206ENST00000473916 A0A087WZG4 1122 aa22.23■■□□□ 1.15
VARS2-206ENST00000473916 KLHDC4Q8TBB5 520 aa22.23■■□□□ 1.15
VARS2-206ENST00000473916 OSBPL3Q9H4L5 887 aa22.23■■□□□ 1.15
VARS2-206ENST00000473916 RAB11FIP3O75154 756 aa22.22■■□□□ 1.15
VARS2-206ENST00000473916 CDC45O75419 566 aa22.22■■□□□ 1.15
VARS2-206ENST00000473916 VPS72Q15906 364 aa22.22■■□□□ 1.15
VARS2-206ENST00000473916 RTL5Q5HYW3 569 aaPredicted RBP22.22■■□□□ 1.15
VARS2-206ENST00000473916 CYP19A1P11511 503 aaPredicted RBP22.21■■□□□ 1.15
VARS2-206ENST00000473916 HSPA1LP34931 641 aa22.21■■□□□ 1.15
VARS2-206ENST00000473916 CASP7P55210 303 aa22.21■■□□□ 1.15
VARS2-206ENST00000473916 C22orf23Q9BZE7 217 aa22.21■■□□□ 1.15
VARS2-206ENST00000473916 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.21■■□□□ 1.15
VARS2-206ENST00000473916 KCNQ2O43526 872 aa22.21■■□□□ 1.15
VARS2-206ENST00000473916 STARD3NLO95772 234 aa22.21■■□□□ 1.15
VARS2-206ENST00000473916 ERICH6Q7L0X2 663 aa22.21■■□□□ 1.15
VARS2-206ENST00000473916 FNBP4Q8N3X1 1017 aaPredicted RBP22.21■■□□□ 1.15
VARS2-206ENST00000473916 TEX13AQ9BXU3 409 aaPredicted RBP22.21■■□□□ 1.15
VARS2-206ENST00000473916 OS9Q13438 667 aaPredicted RBP22.2■■□□□ 1.14
VARS2-206ENST00000473916 KIF1BPQ96EK5 621 aa22.2■■□□□ 1.14
VARS2-206ENST00000473916 HDAC5Q9UQL6 1122 aa22.2■■□□□ 1.14
VARS2-206ENST00000473916 ZBTB1Q9Y2K1 713 aa22.2■■□□□ 1.14
VARS2-206ENST00000473916 SPATA31A6Q5VVP1 1343 aa22.19■■□□□ 1.14
VARS2-206ENST00000473916 ARXQ96QS3 562 aa22.18■■□□□ 1.14
VARS2-206ENST00000473916 SIL1Q9H173 461 aa22.18■■□□□ 1.14
VARS2-206ENST00000473916 USP21Q9UK80 565 aa22.18■■□□□ 1.14
VARS2-206ENST00000473916 CWC25Q9NXE8 425 aaPredicted RBP22.18■■□□□ 1.14
VARS2-206ENST00000473916 STAP2Q9UGK3 403 aa22.18■■□□□ 1.14
VARS2-206ENST00000473916 H7C1W4 665 aa22.16■■□□□ 1.14
VARS2-206ENST00000473916 MYT1Q01538 1121 aa22.16■■□□□ 1.14
VARS2-206ENST00000473916 HSP90AB4PQ58FF6 505 aa22.16■■□□□ 1.14
VARS2-206ENST00000473916 AK9Q5TCS8 1911 aa22.16■■□□□ 1.14
VARS2-206ENST00000473916 MYH14Q7Z406 1995 aaKnown RBP22.15■■□□□ 1.14
VARS2-206ENST00000473916 SASH1O94885 1247 aa22.15■■□□□ 1.14
VARS2-206ENST00000473916 HLFQ16534 295 aa22.15■■□□□ 1.14
VARS2-206ENST00000473916 RABL6Q3YEC7 729 aaPredicted RBP22.14■■□□□ 1.14
VARS2-206ENST00000473916 PTF1AQ7RTS3 328 aa22.14■■□□□ 1.14
VARS2-206ENST00000473916 NUP98P52948 1817 aa22.14■■□□□ 1.14
VARS2-206ENST00000473916 COL15A1P39059 1388 aa22.14■■□□□ 1.13
VARS2-206ENST00000473916 RFX5P48382 616 aaPredicted RBP22.14■■□□□ 1.13
VARS2-206ENST00000473916 FOXO4P98177 505 aa22.14■■□□□ 1.13
VARS2-206ENST00000473916 TCIRG1Q13488 830 aa22.14■■□□□ 1.13
VARS2-206ENST00000473916 KIF6Q6ZMV9 814 aa22.14■■□□□ 1.13
VARS2-206ENST00000473916 ISCA1Q9BUE6 129 aa22.14■■□□□ 1.13
VARS2-206ENST00000473916 THSD7AQ9UPZ6 1657 aa22.13■■□□□ 1.13
VARS2-206ENST00000473916 CCDC191Q8NCU4 936 aa22.13■■□□□ 1.13
VARS2-206ENST00000473916 PI4K2BQ8TCG2 481 aa22.13■■□□□ 1.13
VARS2-206ENST00000473916 ANKRD36CQ5JPF3 1778 aa22.13■■□□□ 1.13
VARS2-206ENST00000473916 PALLDQ8WX93 1383 aa22.13■■□□□ 1.13
VARS2-206ENST00000473916 MAP3K15Q6ZN16 1313 aa22.13■■□□□ 1.13
VARS2-206ENST00000473916 MAP4K4O95819 1239 aaPredicted RBP22.13■■□□□ 1.13
VARS2-206ENST00000473916 ITPK1Q13572 414 aa22.13■■□□□ 1.13
VARS2-206ENST00000473916 FAM182BQ5T319 152 aa22.13■■□□□ 1.13
VARS2-206ENST00000473916 LMBR1LQ6UX01 489 aa22.13■■□□□ 1.13
VARS2-206ENST00000473916 LOC102724428A0A0B4J2F2 783 aa22.12■■□□□ 1.13
VARS2-206ENST00000473916 ATP6V1AP38606 617 aa22.12■■□□□ 1.13
VARS2-206ENST00000473916 SIK1P57059 783 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms