RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 GGCXP38435 758 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 SCTRP47872 440 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 RPIAP49247 311 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 CNPY4Q8N129 248 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 ZNF622Q969S3 477 aaKnown RBP eCLIP6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 PRIMPOLQ96LW4 560 aa6.44□□□□□ -1.38
TMEM39A-206ENST00000473684 M0R2N6 131 aa6.43□□□□□ -1.38
TMEM39A-206ENST00000473684 MYCP01106 439 aaPredicted RBP6.43□□□□□ -1.38
TMEM39A-206ENST00000473684 AMOTL2Q9Y2J4 779 aa6.43□□□□□ -1.38
TMEM39A-206ENST00000473684 TSPOAP1O95153 1857 aa6.43□□□□□ -1.38
TMEM39A-206ENST00000473684 PTMAP06454 111 aaKnown RBP6.43□□□□□ -1.38
TMEM39A-206ENST00000473684 CDK15Q96Q40 435 aa6.43□□□□□ -1.38
TMEM39A-206ENST00000473684 PCF11O94913 1555 aaKnown RBP6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 ERVK-9P63128 1117 aa6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 ZSCAN30Q86W11 494 aa6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 WDR7Q9Y4E6 1490 aa6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 EFCAB5A4FU69 1503 aa6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 PPP1R18Q6NYC8 613 aa6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 YY1AP1Q9H869 796 aa6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 GRPEL1Q9HAV7 217 aa6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 LMTK3Q96Q04 1460 aa6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 WEE1P30291 646 aa6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 RBM25P49756 843 aaKnown RBP6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 TSEN2Q8NCE0 465 aaKnown RBP6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 HINFPQ9BQA5 517 aa6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 HDAC5Q9UQL6 1122 aa6.42□□□□□ -1.38
TMEM39A-206ENST00000473684 CARMIL2Q6F5E8 1435 aa6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 AGLP35573 1532 aa6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 KDM5AP29375 1690 aaKnown RBP6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 NCOA2Q15596 1464 aa6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 EHBP1Q8NDI1 1231 aa6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 KDM5CP41229 1560 aa6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 UACAQ9BZF9 1416 aa6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 LGR5O75473 907 aa6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 GRM5P41594 1212 aa6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 BECN1Q14457 450 aa6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 RC3H1Q5TC82 1133 aaKnown RBP6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 CC2D2BQ6DHV5 1058 aa6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 ZNF358Q9NW07 568 aa6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 ARHGEF12Q9NZN5 1544 aa6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 KIF21BO75037 1637 aa6.41□□□□□ -1.38
TMEM39A-206ENST00000473684 UQCRHLA0A096LP55 91 aa6.4□□□□□ -1.38
TMEM39A-206ENST00000473684 UQCRHP07919 91 aa6.4□□□□□ -1.38
TMEM39A-206ENST00000473684 MPNDQ8N594 471 aa6.4□□□□□ -1.38
TMEM39A-206ENST00000473684 EGFL7Q9UHF1 273 aa6.4□□□□□ -1.38
TMEM39A-206ENST00000473684 CNTLNQ9NXG0 1405 aa6.4□□□□□ -1.38
TMEM39A-206ENST00000473684 RAPGEF6Q8TEU7 1601 aa6.4□□□□□ -1.39
TMEM39A-206ENST00000473684 TMEM229AB2RXF0 380 aa6.4□□□□□ -1.39
TMEM39A-206ENST00000473684 CD2BP2O95400 341 aaKnown RBP6.4□□□□□ -1.39
TMEM39A-206ENST00000473684 DNAJC14Q6Y2X3 702 aaPredicted RBP6.4□□□□□ -1.39
TMEM39A-206ENST00000473684 OSBPL3Q9H4L5 887 aa6.4□□□□□ -1.39
TMEM39A-206ENST00000473684 TDRD9Q8NDG6 1382 aaKnown RBP6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 MSNP26038 577 aaKnown RBP6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 CCDC173Q0VFZ6 552 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 ARID5BQ14865 1188 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 HS1BP3Q53T59 392 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 RNF166Q96A37 237 aaPredicted RBP6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 TSPYL1Q9H0U9 437 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 TMPRSS4Q9NRS4 437 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 GEMIN8Q9NWZ8 242 aaKnown RBP6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 RAB3GAP2Q9H2M9 1393 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 FSHRP23945 695 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 SCNN1DP51172 638 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 FAM193AP78312 1265 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 FAM9BQ8IZU0 186 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 MRS2Q9HD23 443 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 KCNG1Q9UIX4 513 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 KIF27Q86VH2 1401 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 MYO5CQ9NQX4 1742 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 WASLO00401 505 aaPredicted RBP6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 SIAH2O43255 324 aa6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 RRP1P56182 461 aaKnown RBP6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 EMID1Q96A84 441 aaPredicted RBP6.39□□□□□ -1.39
TMEM39A-206ENST00000473684 APPP05067 770 aa6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 DHX9Q08211 1270 aaKnown RBP6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 FKBP5Q13451 457 aaPredicted RBP6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 LIAT1Q6ZQX7 453 aa6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 PPP1R9BQ96SB3 815 aa6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 R3HCC1Q9Y3T6 440 aaKnown RBP6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 ZNF500O60304 480 aaPredicted RBP6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 NOM1Q5C9Z4 860 aaKnown RBP6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 PURBQ96QR8 312 aaKnown RBP6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 ESF1Q9H501 851 aaKnown RBP6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 PRKRIP1Q9H875 184 aaPredicted RBP6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 CYLDQ9NQC7 956 aa6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 CGNQ9P2M7 1197 aaKnown RBP6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 TLL2Q9Y6L7 1015 aa6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 STRCQ7RTU9 1775 aa6.38□□□□□ -1.39
TMEM39A-206ENST00000473684 FHOD3Q2V2M9 1422 aa6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 GDF10P55107 478 aa6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 SASS6Q6UVJ0 657 aa6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 ZNF784Q8NCA9 323 aaPredicted RBP6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 KTN1Q86UP2 1357 aaKnown RBP6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 ASXL2Q76L83 1435 aa6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 ICMTO60725 284 aa6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 STAU1O95793 577 aaKnown RBP6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 ABL1P00519 1130 aa6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 ERCC3P19447 782 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms