RNA–Protein interactions for RNA: ENST00000473515.5

SCML4-209, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 2

Gene SCML4, Length 4,297 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-209ENST00000473515 USP25Q9UHP3 1055 aa11.14□□□□□ -0.63
SCML4-209ENST00000473515 TRMT112Q9UI30 125 aaKnown RBP11.14□□□□□ -0.63
SCML4-209ENST00000473515 KRT85P78386 507 aa11.13□□□□□ -0.63
SCML4-209ENST00000473515 KSR2Q6VAB6 950 aa11.13□□□□□ -0.63
SCML4-209ENST00000473515 MAP7D2Q96T17 732 aa11.13□□□□□ -0.63
SCML4-209ENST00000473515 DNAJC5Q9H3Z4 198 aa11.13□□□□□ -0.63
SCML4-209ENST00000473515 SBNO1A3KN83 1393 aa11.13□□□□□ -0.63
SCML4-209ENST00000473515 LETM1O95202 739 aaPredicted RBP11.13□□□□□ -0.63
SCML4-209ENST00000473515 PRIM1P49642 420 aaKnown RBP11.13□□□□□ -0.63
SCML4-209ENST00000473515 IFIT5Q13325 482 aaKnown RBP11.13□□□□□ -0.63
SCML4-209ENST00000473515 PLEKHF1Q96S99 279 aa11.13□□□□□ -0.63
SCML4-209ENST00000473515 GOLIM4O00461 696 aa11.13□□□□□ -0.63
SCML4-209ENST00000473515 EXOC5O00471 708 aa11.13□□□□□ -0.63
SCML4-209ENST00000473515 ZCRB1Q8TBF4 217 aaKnown RBP11.13□□□□□ -0.63
SCML4-209ENST00000473515 KIF1BO60333 1816 aa11.13□□□□□ -0.63
SCML4-209ENST00000473515 SART3Q15020 963 aaKnown RBP11.12□□□□□ -0.63
SCML4-209ENST00000473515 DDX46Q7L014 1031 aaKnown RBP11.12□□□□□ -0.63
SCML4-209ENST00000473515 IQSEC2Q5JU85 1478 aa11.12□□□□□ -0.63
SCML4-209ENST00000473515 KINO60870 393 aaKnown RBP11.12□□□□□ -0.63
SCML4-209ENST00000473515 CCDC192P0DO97 292 aa11.12□□□□□ -0.63
SCML4-209ENST00000473515 STK38Q15208 465 aa11.12□□□□□ -0.63
SCML4-209ENST00000473515 RNMTO43148 476 aaKnown RBP11.12□□□□□ -0.63
SCML4-209ENST00000473515 CAMK4Q16566 473 aa11.12□□□□□ -0.63
SCML4-209ENST00000473515 SAMD1Q6SPF0 538 aaPredicted RBP11.12□□□□□ -0.63
SCML4-209ENST00000473515 LMBR1LQ6UX01 489 aa11.12□□□□□ -0.63
SCML4-209ENST00000473515 ZSCAN31Q96LW9 406 aaPredicted RBP11.12□□□□□ -0.63
SCML4-209ENST00000473515 ABCA6Q8N139 1617 aa11.12□□□□□ -0.63
SCML4-209ENST00000473515 ME1P48163 572 aa11.11□□□□□ -0.63
SCML4-209ENST00000473515 CWC25Q9NXE8 425 aaPredicted RBP11.11□□□□□ -0.63
SCML4-209ENST00000473515 LRP2BPQ9P2M1 347 aa11.11□□□□□ -0.63
SCML4-209ENST00000473515 KRT32Q14532 448 aa11.11□□□□□ -0.63
SCML4-209ENST00000473515 NUP133Q8WUM0 1156 aa11.11□□□□□ -0.63
SCML4-209ENST00000473515 EVI5LQ96CN4 794 aa11.11□□□□□ -0.63
SCML4-209ENST00000473515 ESYT1Q9BSJ8 1104 aa11.11□□□□□ -0.63
SCML4-209ENST00000473515 PRR36Q9H6K5 1346 aa11.11□□□□□ -0.63
SCML4-209ENST00000473515 HMGN5P82970 282 aaKnown RBP11.11□□□□□ -0.63
SCML4-209ENST00000473515 LDHAL6AQ6ZMR3 332 aa11.11□□□□□ -0.63
SCML4-209ENST00000473515 LINS1Q8NG48 757 aa11.11□□□□□ -0.63
SCML4-209ENST00000473515 USP26Q9BXU7 913 aa11.11□□□□□ -0.63
SCML4-209ENST00000473515 TNMDQ9H2S6 317 aa11.11□□□□□ -0.63
SCML4-209ENST00000473515 HECW2Q9P2P5 1572 aa11.1□□□□□ -0.63
SCML4-209ENST00000473515 LIMCH1Q9UPQ0 1083 aa11.1□□□□□ -0.63
SCML4-209ENST00000473515 TDO2P48775 406 aa11.1□□□□□ -0.63
SCML4-209ENST00000473515 RAI14Q9P0K7 980 aa11.1□□□□□ -0.63
SCML4-209ENST00000473515 ROBO2Q9HCK4 1378 aa11.1□□□□□ -0.63
SCML4-209ENST00000473515 PNMA6EA0A0J9YXQ4 647 aa11.1□□□□□ -0.63
SCML4-209ENST00000473515 GUCY1B3Q02153 619 aa11.1□□□□□ -0.63
SCML4-209ENST00000473515 SPATA32Q96LK8 384 aa11.1□□□□□ -0.63
SCML4-209ENST00000473515 GNL3LQ9NVN8 582 aaKnown RBP11.1□□□□□ -0.63
SCML4-209ENST00000473515 IGHMBP2P38935 993 aaKnown RBP11.09□□□□□ -0.63
SCML4-209ENST00000473515 ZNF771Q7L3S4 317 aaPredicted RBP11.09□□□□□ -0.63
SCML4-209ENST00000473515 ABCC3O15438 1527 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 EFCAB6Q5THR3 1501 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 MTERF4Q7Z6M4 381 aaKnown RBP11.09□□□□□ -0.63
SCML4-209ENST00000473515 HOMER1Q86YM7 354 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 AIDAQ96BJ3 306 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 ZNF830Q96NB3 372 aaPredicted RBP11.09□□□□□ -0.63
SCML4-209ENST00000473515 PDCL3Q9H2J4 239 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 KCNQ3O43525 872 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 ALDH1L1O75891 902 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 NBPF7P0C2Y1 421 aaPredicted RBP11.09□□□□□ -0.63
SCML4-209ENST00000473515 HAND2P61296 217 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 GAS2L3Q86XJ1 694 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 CCAR2Q8N163 923 aaKnown RBP11.09□□□□□ -0.63
SCML4-209ENST00000473515 IL17REQ8NFR9 667 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 NACAP1Q9BZK3 213 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 ZMYND15Q9H091 742 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 CTNNA3Q9UI47 895 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 AKAP2Q9Y2D5 859 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 HCLS1P14317 486 aaPredicted RBP11.09□□□□□ -0.63
SCML4-209ENST00000473515 LRSAM1Q6UWE0 723 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 KLHDC4Q8TBB5 520 aa11.09□□□□□ -0.63
SCML4-209ENST00000473515 CCT2P78371 535 aaKnown RBP11.08□□□□□ -0.64
SCML4-209ENST00000473515 IMMTQ16891 758 aaKnown RBP11.08□□□□□ -0.64
SCML4-209ENST00000473515 ACSBG1Q96GR2 724 aa11.08□□□□□ -0.64
SCML4-209ENST00000473515 TRIM34Q9BYJ4 488 aa11.08□□□□□ -0.64
SCML4-209ENST00000473515 NUP62CLQ9H1M0 184 aa11.08□□□□□ -0.64
SCML4-209ENST00000473515 U3KPZ7 1027 aaPredicted RBP11.08□□□□□ -0.64
SCML4-209ENST00000473515 SOS1Q07889 1333 aaPredicted RBP11.08□□□□□ -0.64
SCML4-209ENST00000473515 CCDC183Q5T5S1 534 aa11.08□□□□□ -0.64
SCML4-209ENST00000473515 ZSCAN25Q6NSZ9 544 aa11.08□□□□□ -0.64
SCML4-209ENST00000473515 CCDC82Q8N4S0 544 aa11.08□□□□□ -0.64
SCML4-209ENST00000473515 NECAB1Q8N987 351 aa11.08□□□□□ -0.64
SCML4-209ENST00000473515 NGLY1Q96IV0 654 aa11.08□□□□□ -0.64
SCML4-209ENST00000473515 LRRC2Q9BYS8 371 aa11.08□□□□□ -0.64
SCML4-209ENST00000473515 CFAP74Q9C0B2 1584 aa11.08□□□□□ -0.64
SCML4-209ENST00000473515 RAB11FIP4Q86YS3 637 aa11.07□□□□□ -0.64
SCML4-209ENST00000473515 PIBF1Q8WXW3 757 aa11.07□□□□□ -0.64
SCML4-209ENST00000473515 ZNF396Q96N95 335 aaPredicted RBP11.07□□□□□ -0.64
SCML4-209ENST00000473515 TFIP11Q9UBB9 837 aaKnown RBP11.07□□□□□ -0.64
SCML4-209ENST00000473515 DTNBO60941 627 aa11.07□□□□□ -0.64
SCML4-209ENST00000473515 CD2BP2O95400 341 aaKnown RBP11.07□□□□□ -0.64
SCML4-209ENST00000473515 ZNF790Q6PG37 636 aa11.07□□□□□ -0.64
SCML4-209ENST00000473515 STX6O43752 255 aa11.07□□□□□ -0.64
SCML4-209ENST00000473515 CKAP2LQ8IYA6 745 aa11.07□□□□□ -0.64
SCML4-209ENST00000473515 DDX21Q9NR30 783 aaKnown RBP eCLIP11.07□□□□□ -0.64
SCML4-209ENST00000473515 ANKRD18BA2A2Z9 1011 aa11.06□□□□□ -0.64
SCML4-209ENST00000473515 CCDC69A6NI79 296 aa11.06□□□□□ -0.64
SCML4-209ENST00000473515 MINDY4BA8MYZ0 360 aa11.06□□□□□ -0.64
SCML4-209ENST00000473515 TPM3P06753 285 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms