RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 BAG6P46379 1132 aa12.01□□□□□ -0.49
SMC4-214ENST00000472991 NFE2L2Q16236 605 aa12.01□□□□□ -0.49
SMC4-214ENST00000472991 TUBGCP6Q96RT7 1819 aa12.01□□□□□ -0.49
SMC4-214ENST00000472991 ERVV-2B6SEH9 535 aa12□□□□□ -0.49
SMC4-214ENST00000472991 PSEN2P49810 448 aa12□□□□□ -0.49
SMC4-214ENST00000472991 DMRTA1Q5VZB9 504 aa12□□□□□ -0.49
SMC4-214ENST00000472991 ADGRD1Q6QNK2 874 aa12□□□□□ -0.49
SMC4-214ENST00000472991 FAM9BQ8IZU0 186 aa12□□□□□ -0.49
SMC4-214ENST00000472991 LGR6Q9HBX8 967 aa12□□□□□ -0.49
SMC4-214ENST00000472991 ANO8Q9HCE9 1232 aaPredicted RBP12□□□□□ -0.49
SMC4-214ENST00000472991 TMOD3Q9NYL9 352 aa12□□□□□ -0.49
SMC4-214ENST00000472991 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
SMC4-214ENST00000472991 COL5A3P25940 1745 aaPredicted RBP12□□□□□ -0.49
SMC4-214ENST00000472991 EN1Q05925 392 aaPredicted RBP11.99□□□□□ -0.49
SMC4-214ENST00000472991 PIGBQ92521 554 aa11.99□□□□□ -0.49
SMC4-214ENST00000472991 RRP7AQ9Y3A4 280 aaKnown RBP11.99□□□□□ -0.49
SMC4-214ENST00000472991 CEMIPQ8WUJ3 1361 aa11.99□□□□□ -0.49
SMC4-214ENST00000472991 TJP1Q07157 1748 aa11.99□□□□□ -0.49
SMC4-214ENST00000472991 CICQ96RK0 1608 aaPredicted RBP11.98□□□□□ -0.49
SMC4-214ENST00000472991 TMPOP42166 694 aaKnown RBP11.98□□□□□ -0.49
SMC4-214ENST00000472991 CABP4P57796 275 aa11.98□□□□□ -0.49
SMC4-214ENST00000472991 DCTN1Q14203 1278 aa11.98□□□□□ -0.49
SMC4-214ENST00000472991 MCM10Q7L590 875 aa11.98□□□□□ -0.49
SMC4-214ENST00000472991 RTF1Q92541 710 aaKnown RBP11.98□□□□□ -0.49
SMC4-214ENST00000472991 EMILIN3Q9NT22 766 aa11.98□□□□□ -0.49
SMC4-214ENST00000472991 PALLDQ8WX93 1383 aa11.97□□□□□ -0.49
SMC4-214ENST00000472991 TK2O00142 265 aa11.97□□□□□ -0.49
SMC4-214ENST00000472991 EVI5O60447 810 aa11.97□□□□□ -0.49
SMC4-214ENST00000472991 RIPK4P57078 832 aa11.97□□□□□ -0.49
SMC4-214ENST00000472991 NEUROD2Q15784 382 aa11.97□□□□□ -0.49
SMC4-214ENST00000472991 EZH2Q15910 746 aaKnown RBP11.97□□□□□ -0.49
SMC4-214ENST00000472991 ZNF454Q8N9F8 522 aa11.97□□□□□ -0.49
SMC4-214ENST00000472991 NFATC2IPQ8NCF5 419 aa11.97□□□□□ -0.49
SMC4-214ENST00000472991 IL17REQ8NFR9 667 aa11.97□□□□□ -0.49
SMC4-214ENST00000472991 SLC52A2Q9HAB3 445 aa11.97□□□□□ -0.49
SMC4-214ENST00000472991 SENP3-EIF4A1A0A087X0R7 540 aa11.96□□□□□ -0.49
SMC4-214ENST00000472991 APAF1O14727 1248 aa11.96□□□□□ -0.49
SMC4-214ENST00000472991 PLSCR1O15162 318 aa11.96□□□□□ -0.49
SMC4-214ENST00000472991 HTATSF1O43719 755 aaKnown RBP11.96□□□□□ -0.49
SMC4-214ENST00000472991 FOSBP53539 338 aa11.96□□□□□ -0.49
SMC4-214ENST00000472991 TEFQ10587 303 aa11.96□□□□□ -0.49
SMC4-214ENST00000472991 CAMKK2Q96RR4 588 aa11.96□□□□□ -0.49
SMC4-214ENST00000472991 LAMB4A4D0S4 1761 aa11.96□□□□□ -0.49
SMC4-214ENST00000472991 QSER1Q2KHR3 1735 aa11.96□□□□□ -0.49
SMC4-214ENST00000472991 KCPQ6ZWJ8 1503 aa11.96□□□□□ -0.5
SMC4-214ENST00000472991 C4BP0C0L5 1744 aa11.95□□□□□ -0.5
SMC4-214ENST00000472991 THUMPD2Q9BTF0 503 aaKnown RBP11.95□□□□□ -0.5
SMC4-214ENST00000472991 ASAP1Q9ULH1 1129 aa11.95□□□□□ -0.5
SMC4-214ENST00000472991 MYH14Q7Z406 1995 aaKnown RBP11.95□□□□□ -0.5
SMC4-214ENST00000472991 UBR3Q6ZT12 1888 aa11.95□□□□□ -0.5
SMC4-214ENST00000472991 LMOD3Q0VAK6 560 aa11.94□□□□□ -0.5
SMC4-214ENST00000472991 TXNRD1Q16881 649 aa11.94□□□□□ -0.5
SMC4-214ENST00000472991 SMARCC1Q92922 1105 aaPredicted RBP11.94□□□□□ -0.5
SMC4-214ENST00000472991 KCNK17Q96T54 332 aa11.94□□□□□ -0.5
SMC4-214ENST00000472991 ATG3Q9NT62 314 aa11.94□□□□□ -0.5
SMC4-214ENST00000472991 HRO43593 1189 aa11.93□□□□□ -0.5
SMC4-214ENST00000472991 MAP3K9P80192 1104 aa11.93□□□□□ -0.5
SMC4-214ENST00000472991 SLC39A6Q13433 755 aa11.93□□□□□ -0.5
SMC4-214ENST00000472991 BCL2L12Q9HB09 334 aa11.93□□□□□ -0.5
SMC4-214ENST00000472991 KCNQ4P56696 695 aa11.92□□□□□ -0.5
SMC4-214ENST00000472991 CAMK2BQ13554 666 aa11.91□□□□□ -0.5
SMC4-214ENST00000472991 LRRC4BQ9NT99 713 aa11.91□□□□□ -0.5
SMC4-214ENST00000472991 CCNL1Q9UK58 526 aaPredicted RBP11.91□□□□□ -0.5
SMC4-214ENST00000472991 LOC102724428A0A0B4J2F2 783 aa11.9□□□□□ -0.5
SMC4-214ENST00000472991 BTBD11A6QL63 1104 aa11.9□□□□□ -0.5
SMC4-214ENST00000472991 PTCD1O75127 700 aaKnown RBP11.9□□□□□ -0.5
SMC4-214ENST00000472991 C4AP0C0L4 1744 aa11.9□□□□□ -0.5
SMC4-214ENST00000472991 SIK1P57059 783 aa11.9□□□□□ -0.5
SMC4-214ENST00000472991 TAF7Q15545 349 aaPredicted RBP11.9□□□□□ -0.5
SMC4-214ENST00000472991 SLC27A3Q5K4L6 730 aa11.9□□□□□ -0.5
SMC4-214ENST00000472991 TTC5Q8N0Z6 440 aa11.9□□□□□ -0.5
SMC4-214ENST00000472991 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
SMC4-214ENST00000472991 SALL2Q9Y467 1007 aaPredicted RBP11.9□□□□□ -0.5
SMC4-214ENST00000472991 CASZ1Q86V15 1759 aa11.9□□□□□ -0.51
SMC4-214ENST00000472991 KCNQ3O43525 872 aa11.89□□□□□ -0.51
SMC4-214ENST00000472991 ZNF790Q6PG37 636 aa11.89□□□□□ -0.51
SMC4-214ENST00000472991 SLC4A9Q96Q91 983 aa11.89□□□□□ -0.51
SMC4-214ENST00000472991 MIS18AQ9NYP9 233 aa11.89□□□□□ -0.51
SMC4-214ENST00000472991 ATP6V1AP38606 617 aa11.88□□□□□ -0.51
SMC4-214ENST00000472991 ITPK1Q13572 414 aa11.88□□□□□ -0.51
SMC4-214ENST00000472991 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.88□□□□□ -0.51
SMC4-214ENST00000472991 CCDC27Q2M243 656 aa11.87□□□□□ -0.51
SMC4-214ENST00000472991 ZNF496Q96IT1 587 aaPredicted RBP11.87□□□□□ -0.51
SMC4-214ENST00000472991 HEG1Q9ULI3 1381 aa11.87□□□□□ -0.51
SMC4-214ENST00000472991 ZNF827Q17R98 1081 aa11.86□□□□□ -0.51
SMC4-214ENST00000472991 WWC1Q8IX03 1113 aa11.86□□□□□ -0.51
SMC4-214ENST00000472991 LINC00116Q8NCU8 138 aa11.86□□□□□ -0.51
SMC4-214ENST00000472991 ZDHHC16Q969W1 377 aa11.86□□□□□ -0.51
SMC4-214ENST00000472991 FMNL2Q96PY5 1086 aa11.86□□□□□ -0.51
SMC4-214ENST00000472991 ADAM33Q9BZ11 813 aa11.86□□□□□ -0.51
SMC4-214ENST00000472991 TSPYL4Q9UJ04 414 aa11.86□□□□□ -0.51
SMC4-214ENST00000472991 VPS9D1Q9Y2B5 631 aa11.86□□□□□ -0.51
SMC4-214ENST00000472991 LAS1LQ9Y4W2 734 aaKnown RBP11.86□□□□□ -0.51
SMC4-214ENST00000472991 PTPREP23469 700 aa11.85□□□□□ -0.51
SMC4-214ENST00000472991 CALD1Q05682 793 aaKnown RBP11.85□□□□□ -0.51
SMC4-214ENST00000472991 NBPF14Q5TI25 921 aa11.85□□□□□ -0.51
SMC4-214ENST00000472991 DNAJC10Q8IXB1 793 aa11.85□□□□□ -0.51
SMC4-214ENST00000472991 SLC4A5Q9BY07 1137 aa11.85□□□□□ -0.51
SMC4-214ENST00000472991 STK32BQ9NY57 414 aa11.85□□□□□ -0.51
SMC4-214ENST00000472991 CHL1O00533 1208 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms