RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 CCDC93Q567U6 631 aa15.22■□□□□ 0.03
MRPL40-203ENST00000471259 AMER1Q5JTC6 1135 aaPredicted RBP15.22■□□□□ 0.03
MRPL40-203ENST00000471259 CLEC4GQ6UXB4 293 aa15.22■□□□□ 0.03
MRPL40-203ENST00000471259 TBC1D2BQ9UPU7 963 aa15.22■□□□□ 0.03
MRPL40-203ENST00000471259 PRPF40BQ6NWY9 871 aaKnown RBP15.21■□□□□ 0.03
MRPL40-203ENST00000471259 PNMA8AQ86V59 439 aaPredicted RBP15.21■□□□□ 0.03
MRPL40-203ENST00000471259 ZNF496Q96IT1 587 aaPredicted RBP15.21■□□□□ 0.03
MRPL40-203ENST00000471259 L3MBTL3Q96JM7 780 aaPredicted RBP15.21■□□□□ 0.03
MRPL40-203ENST00000471259 CNTNAP1P78357 1384 aa15.21■□□□□ 0.02
MRPL40-203ENST00000471259 PCNTO95613 3336 aa15.2■□□□□ 0.02
MRPL40-203ENST00000471259 SCN4AP35499 1836 aa15.2■□□□□ 0.02
MRPL40-203ENST00000471259 SCN7AQ01118 1682 aa15.2■□□□□ 0.02
MRPL40-203ENST00000471259 TMEM88BA6NKF7 163 aa15.2■□□□□ 0.02
MRPL40-203ENST00000471259 DZIP3Q86Y13 1208 aaKnown RBP15.2■□□□□ 0.02
MRPL40-203ENST00000471259 RTKN2Q8IZC4 609 aa15.2■□□□□ 0.02
MRPL40-203ENST00000471259 RGL2O15211 777 aa15.19■□□□□ 0.02
MRPL40-203ENST00000471259 NPR1P16066 1061 aa15.19■□□□□ 0.02
MRPL40-203ENST00000471259 TPTE2Q6XPS3 522 aa15.19■□□□□ 0.02
MRPL40-203ENST00000471259 NBPF5PQ86XG9 351 aaPredicted RBP15.19■□□□□ 0.02
MRPL40-203ENST00000471259 PCGF6Q9BYE7 350 aa15.19■□□□□ 0.02
MRPL40-203ENST00000471259 ANKRD31Q8N7Z5 1873 aa15.18■□□□□ 0.02
MRPL40-203ENST00000471259 U2SURPO15042 1029 aaKnown RBP15.18■□□□□ 0.02
MRPL40-203ENST00000471259 CAMTA2O94983 1202 aa15.18■□□□□ 0.02
MRPL40-203ENST00000471259 ALDH1B1P30837 517 aa15.18■□□□□ 0.02
MRPL40-203ENST00000471259 FKBP4Q02790 459 aaKnown RBP eCLIP15.18■□□□□ 0.02
MRPL40-203ENST00000471259 TAF1DQ9H5J8 278 aaPredicted RBP15.18■□□□□ 0.02
MRPL40-203ENST00000471259 HACL1Q9UJ83 578 aa15.18■□□□□ 0.02
MRPL40-203ENST00000471259 CLEC11AQ9Y240 323 aa15.18■□□□□ 0.02
MRPL40-203ENST00000471259 BTBD11A6QL63 1104 aa15.17■□□□□ 0.02
MRPL40-203ENST00000471259 PASKQ96RG2 1323 aa15.17■□□□□ 0.02
MRPL40-203ENST00000471259 ARFGEF2Q9Y6D5 1785 aa15.16■□□□□ 0.02
MRPL40-203ENST00000471259 FOXN1O15353 648 aa15.16■□□□□ 0.02
MRPL40-203ENST00000471259 A1BGP04217 495 aa15.16■□□□□ 0.02
MRPL40-203ENST00000471259 MAP2K1Q02750 393 aaPredicted RBP15.16■□□□□ 0.02
MRPL40-203ENST00000471259 EAPPQ56P03 285 aaPredicted RBP15.16■□□□□ 0.02
MRPL40-203ENST00000471259 CCDC24Q8N4L8 307 aa15.16■□□□□ 0.02
MRPL40-203ENST00000471259 IL17REQ8NFR9 667 aa15.16■□□□□ 0.02
MRPL40-203ENST00000471259 GTF2E1P29083 439 aaPredicted RBP15.15■□□□□ 0.02
MRPL40-203ENST00000471259 DEFB115Q30KQ5 88 aa15.15■□□□□ 0.02
MRPL40-203ENST00000471259 GRIPAP1Q4V328 841 aa15.15■□□□□ 0.02
MRPL40-203ENST00000471259 JDP2Q8WYK2 163 aa15.15■□□□□ 0.02
MRPL40-203ENST00000471259 RTF1Q92541 710 aaKnown RBP15.15■□□□□ 0.02
MRPL40-203ENST00000471259 CFAP53Q96M91 514 aa15.15■□□□□ 0.02
MRPL40-203ENST00000471259 SLX4Q8IY92 1834 aa15.15■□□□□ 0.02
MRPL40-203ENST00000471259 COL11A2P13942 1736 aaPredicted RBP15.14■□□□□ 0.01
MRPL40-203ENST00000471259 SNRPA1P09661 255 aaKnown RBP15.14■□□□□ 0.01
MRPL40-203ENST00000471259 EPHX2P34913 555 aa15.14■□□□□ 0.01
MRPL40-203ENST00000471259 CC2D1BQ5T0F9 858 aaKnown RBP15.14■□□□□ 0.01
MRPL40-203ENST00000471259 CC2D2BQ6DHV5 1058 aa15.14■□□□□ 0.01
MRPL40-203ENST00000471259 BEGAINQ9BUH8 593 aa15.14■□□□□ 0.01
MRPL40-203ENST00000471259 NUDCQ9Y266 331 aa15.14■□□□□ 0.01
MRPL40-203ENST00000471259 CEMIPQ8WUJ3 1361 aa15.13■□□□□ 0.01
MRPL40-203ENST00000471259 NPC1L1Q9UHC9 1359 aa15.13■□□□□ 0.01
MRPL40-203ENST00000471259 KLRG2A4D1S0 409 aaPredicted RBP15.13■□□□□ 0.01
MRPL40-203ENST00000471259 POTEIP0CG38 1075 aa15.13■□□□□ 0.01
MRPL40-203ENST00000471259 POTEJP0CG39 1038 aa15.13■□□□□ 0.01
MRPL40-203ENST00000471259 VEGFBP49765 207 aa15.13■□□□□ 0.01
MRPL40-203ENST00000471259 CACNA1SQ13698 1873 aa15.13■□□□□ 0.01
MRPL40-203ENST00000471259 GPC2Q8N158 579 aa15.13■□□□□ 0.01
MRPL40-203ENST00000471259 WBP1LQ9NX94 342 aa15.13■□□□□ 0.01
MRPL40-203ENST00000471259 ITGBL1O95965 494 aaPredicted RBP15.12■□□□□ 0.01
MRPL40-203ENST00000471259 LMOD1P29536 600 aaPredicted RBP15.12■□□□□ 0.01
MRPL40-203ENST00000471259 IARSP41252 1262 aaKnown RBP15.12■□□□□ 0.01
MRPL40-203ENST00000471259 EIF6P56537 245 aaKnown RBP15.12■□□□□ 0.01
MRPL40-203ENST00000471259 C7orf43Q8WVR3 580 aa15.12■□□□□ 0.01
MRPL40-203ENST00000471259 NYXQ9GZU5 481 aa15.12■□□□□ 0.01
MRPL40-203ENST00000471259 NIP7Q9Y221 180 aaKnown RBP eCLIP15.12■□□□□ 0.01
MRPL40-203ENST00000471259 BCORQ6W2J9 1755 aa15.11■□□□□ 0.01
MRPL40-203ENST00000471259 RASSF10A6NK89 507 aa15.11■□□□□ 0.01
MRPL40-203ENST00000471259 ECE1P42892 770 aa15.11■□□□□ 0.01
MRPL40-203ENST00000471259 CNTROBQ8N137 903 aa15.11■□□□□ 0.01
MRPL40-203ENST00000471259 TMX4Q9H1E5 349 aaPredicted RBP15.11■□□□□ 0.01
MRPL40-203ENST00000471259 ZNF277Q9NRM2 450 aaPredicted RBP15.11■□□□□ 0.01
MRPL40-203ENST00000471259 ABT1Q9ULW3 272 aaKnown RBP15.11■□□□□ 0.01
MRPL40-203ENST00000471259 KIF7Q2M1P5 1343 aa15.11■□□□□ 0.01
MRPL40-203ENST00000471259 SIPA1L3O60292 1781 aaPredicted RBP15.11■□□□□ 0.01
MRPL40-203ENST00000471259 FZD9O00144 591 aa15.1■□□□□ 0.01
MRPL40-203ENST00000471259 PER1O15534 1290 aaPredicted RBP15.1■□□□□ 0.01
MRPL40-203ENST00000471259 LBX1P52954 281 aa15.1■□□□□ 0.01
MRPL40-203ENST00000471259 PSMD1Q99460 953 aa15.1■□□□□ 0.01
MRPL40-203ENST00000471259 USP16Q9Y5T5 823 aa15.1■□□□□ 0.01
MRPL40-203ENST00000471259 NEFMP07197 916 aa15.09■□□□□ 0.01
MRPL40-203ENST00000471259 SYNE4Q8N205 404 aa15.09■□□□□ 0.01
MRPL40-203ENST00000471259 HTATSF1O43719 755 aaKnown RBP15.08■□□□□ 0
MRPL40-203ENST00000471259 PRKAR2BP31323 418 aa15.08■□□□□ 0
MRPL40-203ENST00000471259 CCER1Q8TC90 406 aaPredicted RBP15.08■□□□□ 0
MRPL40-203ENST00000471259 RNF123Q5XPI4 1314 aa15.08■□□□□ 0
MRPL40-203ENST00000471259 WDR33Q9C0J8 1336 aaKnown RBP15.08■□□□□ 0
MRPL40-203ENST00000471259 ZNF541Q9H0D2 1346 aa15.08■□□□□ 0
MRPL40-203ENST00000471259 SLC4A2P04920 1241 aa15.07■□□□□ 0
MRPL40-203ENST00000471259 MAP1SQ66K74 1059 aaPredicted RBP15.06■□□□□ 0
MRPL40-203ENST00000471259 RPGRQ92834 1020 aaKnown RBP15.06■□□□□ 0
MRPL40-203ENST00000471259 DDX21Q9NR30 783 aaKnown RBP eCLIP15.06■□□□□ 0
MRPL40-203ENST00000471259 FAM177BA6PVY3 158 aa15.05■□□□□ -0
MRPL40-203ENST00000471259 ERVV-1B6SEH8 477 aa15.05■□□□□ -0
MRPL40-203ENST00000471259 KCNQ3O43525 872 aa15.05■□□□□ -0
MRPL40-203ENST00000471259 HSPA8P11142 646 aaKnown RBP15.05■□□□□ -0
MRPL40-203ENST00000471259 PAXIP1Q6ZW49 1069 aaPredicted RBP15.05■□□□□ -0
MRPL40-203ENST00000471259 USP50Q70EL3 339 aaPredicted RBP15.05■□□□□ -0
MRPL40-203ENST00000471259 PNISRQ8TF01 805 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms