RNA–Protein interactions for RNA: ENST00000471161.1

TMEM139-206, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 1,724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-206ENST00000471161 TEX13AQ9BXU3 409 aaPredicted RBP16.32■□□□□ 0.2
TMEM139-206ENST00000471161 NEURL1BA8MQ27 555 aa16.31■□□□□ 0.2
TMEM139-206ENST00000471161 C9orf78Q9NZ63 289 aaPredicted RBP16.31■□□□□ 0.2
TMEM139-206ENST00000471161 KCNQ2O43526 872 aa16.31■□□□□ 0.2
TMEM139-206ENST00000471161 MYT1Q01538 1121 aa16.31■□□□□ 0.2
TMEM139-206ENST00000471161 NEXNQ0ZGT2 675 aa16.31■□□□□ 0.2
TMEM139-206ENST00000471161 GJD4Q96KN9 370 aaPredicted RBP16.31■□□□□ 0.2
TMEM139-206ENST00000471161 ATRNO75882 1429 aa16.3■□□□□ 0.2
TMEM139-206ENST00000471161 UTYO14607 1347 aa16.3■□□□□ 0.2
TMEM139-206ENST00000471161 GRM8O00222 908 aa16.3■□□□□ 0.2
TMEM139-206ENST00000471161 CYP19A1P11511 503 aaPredicted RBP16.3■□□□□ 0.2
TMEM139-206ENST00000471161 IBTKQ9P2D0 1353 aaPredicted RBP16.29■□□□□ 0.2
TMEM139-206ENST00000471161 APBB1O00213 710 aa16.29■□□□□ 0.2
TMEM139-206ENST00000471161 STARD3NLO95772 234 aa16.29■□□□□ 0.2
TMEM139-206ENST00000471161 PPP1R42Q7Z4L9 355 aa16.29■□□□□ 0.2
TMEM139-206ENST00000471161 SSH3Q8TE77 659 aa16.29■□□□□ 0.2
TMEM139-206ENST00000471161 SMARCA5O60264 1052 aaPredicted RBP16.28■□□□□ 0.2
TMEM139-206ENST00000471161 POLA2Q14181 598 aa16.28■□□□□ 0.2
TMEM139-206ENST00000471161 GCKRQ14397 625 aa16.28■□□□□ 0.2
TMEM139-206ENST00000471161 KAZALD1Q96I82 304 aa16.28■□□□□ 0.2
TMEM139-206ENST00000471161 SUCLG2Q96I99 432 aa16.28■□□□□ 0.2
TMEM139-206ENST00000471161 EXOC6BQ9Y2D4 811 aa16.28■□□□□ 0.2
TMEM139-206ENST00000471161 ATP5J2-PTCD1G3V325 749 aa16.28■□□□□ 0.2
TMEM139-206ENST00000471161 C16orf71Q8IYS4 520 aaPredicted RBP16.28■□□□□ 0.2
TMEM139-206ENST00000471161 ZBTB3Q9H5J0 574 aa16.28■□□□□ 0.2
TMEM139-206ENST00000471161 SRGAP3O43295 1099 aa16.26■□□□□ 0.19
TMEM139-206ENST00000471161 PTF1AQ7RTS3 328 aa16.26■□□□□ 0.19
TMEM139-206ENST00000471161 TRPC5Q9UL62 973 aaPredicted RBP16.26■□□□□ 0.19
TMEM139-206ENST00000471161 ZBTB1Q9Y2K1 713 aa16.26■□□□□ 0.19
TMEM139-206ENST00000471161 ZNF330Q9Y3S2 320 aaPredicted RBP16.26■□□□□ 0.19
TMEM139-206ENST00000471161 CICQ96RK0 1608 aaPredicted RBP16.26■□□□□ 0.19
TMEM139-206ENST00000471161 MTX1Q13505 466 aa16.25■□□□□ 0.19
TMEM139-206ENST00000471161 FAM182BQ5T319 152 aa16.25■□□□□ 0.19
TMEM139-206ENST00000471161 OTUD7AQ8TE49 926 aaPredicted RBP16.25■□□□□ 0.19
TMEM139-206ENST00000471161 JARID2Q92833 1246 aaPredicted RBP16.25■□□□□ 0.19
TMEM139-206ENST00000471161 BCL11AQ9H165 835 aa16.25■□□□□ 0.19
TMEM139-206ENST00000471161 PALLDQ8WX93 1383 aa16.25■□□□□ 0.19
TMEM139-206ENST00000471161 MYH14Q7Z406 1995 aaKnown RBP16.25■□□□□ 0.19
TMEM139-206ENST00000471161 LOC102724428A0A0B4J2F2 783 aa16.25■□□□□ 0.19
TMEM139-206ENST00000471161 ONECUT3O60422 494 aaPredicted RBP16.25■□□□□ 0.19
TMEM139-206ENST00000471161 SIK1P57059 783 aa16.25■□□□□ 0.19
TMEM139-206ENST00000471161 PLEKHM2Q8IWE5 1019 aa16.25■□□□□ 0.19
TMEM139-206ENST00000471161 ATP6V1AP38606 617 aa16.24■□□□□ 0.19
TMEM139-206ENST00000471161 ITPK1Q13572 414 aa16.24■□□□□ 0.19
TMEM139-206ENST00000471161 BICC1Q9H694 974 aaKnown RBP16.24■□□□□ 0.19
TMEM139-206ENST00000471161 BTAF1O14981 1849 aa16.23■□□□□ 0.19
TMEM139-206ENST00000471161 SBF2Q86WG5 1849 aa16.23■□□□□ 0.19
TMEM139-206ENST00000471161 NHSQ6T4R5 1651 aa16.23■□□□□ 0.19
TMEM139-206ENST00000471161 RREB1Q92766 1687 aa16.23■□□□□ 0.19
TMEM139-206ENST00000471161 EPHA10Q5JZY3 1008 aa16.23■□□□□ 0.19
TMEM139-206ENST00000471161 QTRT2Q9H974 415 aaKnown RBP16.23■□□□□ 0.19
TMEM139-206ENST00000471161 ZBTB47Q9UFB7 747 aaPredicted RBP16.23■□□□□ 0.19
TMEM139-206ENST00000471161 HDAC5Q9UQL6 1122 aa16.23■□□□□ 0.19
TMEM139-206ENST00000471161 A0A087WZG4 1122 aa16.22■□□□□ 0.19
TMEM139-206ENST00000471161 CASP7P55210 303 aa16.22■□□□□ 0.19
TMEM139-206ENST00000471161 SMARCC1Q92922 1105 aaPredicted RBP16.22■□□□□ 0.19
TMEM139-206ENST00000471161 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
TMEM139-206ENST00000471161 SURF6O75683 361 aaKnown RBP16.22■□□□□ 0.19
TMEM139-206ENST00000471161 SEC24BO95487 1268 aa16.22■□□□□ 0.19
TMEM139-206ENST00000471161 INTS5Q6P9B9 1019 aaKnown RBP16.22■□□□□ 0.19
TMEM139-206ENST00000471161 UBE3BQ7Z3V4 1068 aa16.22■□□□□ 0.19
TMEM139-206ENST00000471161 SEPT12Q8IYM1 358 aa16.22■□□□□ 0.19
TMEM139-206ENST00000471161 LRRCC1Q9C099 1032 aa16.22■□□□□ 0.19
TMEM139-206ENST00000471161 NUP98P52948 1817 aa16.21■□□□□ 0.19
TMEM139-206ENST00000471161 ZNF831Q5JPB2 1677 aa16.21■□□□□ 0.19
TMEM139-206ENST00000471161 KIF6Q6ZMV9 814 aa16.21■□□□□ 0.19
TMEM139-206ENST00000471161 MAP3K15Q6ZN16 1313 aa16.21■□□□□ 0.19
TMEM139-206ENST00000471161 ISCA1Q9BUE6 129 aa16.21■□□□□ 0.19
TMEM139-206ENST00000471161 CWC25Q9NXE8 425 aaPredicted RBP16.21■□□□□ 0.19
TMEM139-206ENST00000471161 H7C1W4 665 aa16.2■□□□□ 0.18
TMEM139-206ENST00000471161 IL6STP40189 918 aaPredicted RBP16.2■□□□□ 0.18
TMEM139-206ENST00000471161 CRKLP46109 303 aaKnown RBP16.2■□□□□ 0.18
TMEM139-206ENST00000471161 TCIRG1Q13488 830 aa16.2■□□□□ 0.18
TMEM139-206ENST00000471161 ARXQ96QS3 562 aa16.2■□□□□ 0.18
TMEM139-206ENST00000471161 PA2G4Q9UQ80 394 aaKnown RBP16.2■□□□□ 0.18
TMEM139-206ENST00000471161 ANKRD36CQ5JPF3 1778 aa16.2■□□□□ 0.18
TMEM139-206ENST00000471161 COL15A1P39059 1388 aa16.2■□□□□ 0.18
TMEM139-206ENST00000471161 HLFQ16534 295 aa16.19■□□□□ 0.18
TMEM139-206ENST00000471161 BMP2KLQ5H9B9 411 aa16.19■□□□□ 0.18
TMEM139-206ENST00000471161 CCDC191Q8NCU4 936 aa16.19■□□□□ 0.18
TMEM139-206ENST00000471161 CCDC87Q9NVE4 849 aa16.19■□□□□ 0.18
TMEM139-206ENST00000471161 NOP58Q9Y2X3 529 aaKnown RBP16.19■□□□□ 0.18
TMEM139-206ENST00000471161 BRWD3Q6RI45 1802 aa16.19■□□□□ 0.18
TMEM139-206ENST00000471161 SALL3Q9BXA9 1300 aa16.19■□□□□ 0.18
TMEM139-206ENST00000471161 RAB11FIP3O75154 756 aa16.19■□□□□ 0.18
TMEM139-206ENST00000471161 GSPT1P15170 499 aaKnown RBP16.19■□□□□ 0.18
TMEM139-206ENST00000471161 NPM2Q86SE8 214 aaKnown RBP16.19■□□□□ 0.18
TMEM139-206ENST00000471161 EIF5P55010 431 aaKnown RBP16.18■□□□□ 0.18
TMEM139-206ENST00000471161 KCNQ4P56696 695 aa16.18■□□□□ 0.18
TMEM139-206ENST00000471161 RTL5Q5HYW3 569 aaPredicted RBP16.18■□□□□ 0.18
TMEM139-206ENST00000471161 GIGYF2Q6Y7W6 1299 aaKnown RBP16.18■□□□□ 0.18
TMEM139-206ENST00000471161 RHPN1Q8TCX5 695 aa16.18■□□□□ 0.18
TMEM139-206ENST00000471161 IL1RAPL2Q9NP60 686 aa16.18■□□□□ 0.18
TMEM139-206ENST00000471161 TBC1D2BQ9UPU7 963 aa16.18■□□□□ 0.18
TMEM139-206ENST00000471161 RABL6Q3YEC7 729 aaPredicted RBP16.17■□□□□ 0.18
TMEM139-206ENST00000471161 TTC22Q5TAA0 569 aa16.17■□□□□ 0.18
TMEM139-206ENST00000471161 DZIP3Q86Y13 1208 aaKnown RBP16.17■□□□□ 0.18
TMEM139-206ENST00000471161 TRIM28Q13263 835 aaKnown RBP16.16■□□□□ 0.18
TMEM139-206ENST00000471161 LINC00116Q8NCU8 138 aa16.16■□□□□ 0.18
TMEM139-206ENST00000471161 TUBGCP6Q96RT7 1819 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms