RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 RIC3Q7Z5B4 369 aa10.46□□□□□ -0.73
GTF3A-206ENST00000470606 LINS1Q8NG48 757 aa10.46□□□□□ -0.73
GTF3A-206ENST00000470606 CHMP4BQ9H444 224 aaKnown RBP10.46□□□□□ -0.73
GTF3A-206ENST00000470606 RGS17Q9UGC6 210 aaPredicted RBP10.46□□□□□ -0.73
GTF3A-206ENST00000470606 NEURL1BA8MQ27 555 aa10.46□□□□□ -0.74
GTF3A-206ENST00000470606 GNAI2P04899 355 aa10.46□□□□□ -0.74
GTF3A-206ENST00000470606 RGS3P49796 1198 aa10.46□□□□□ -0.74
GTF3A-206ENST00000470606 INTS5Q6P9B9 1019 aaKnown RBP10.46□□□□□ -0.74
GTF3A-206ENST00000470606 PLBD2Q8NHP8 589 aa10.46□□□□□ -0.74
GTF3A-206ENST00000470606 FBXO41Q8TF61 875 aa10.46□□□□□ -0.74
GTF3A-206ENST00000470606 MYD88Q99836 296 aa10.46□□□□□ -0.74
GTF3A-206ENST00000470606 RREB1Q92766 1687 aa10.46□□□□□ -0.74
GTF3A-206ENST00000470606 ATP5J2-PTCD1G3V325 749 aa10.45□□□□□ -0.74
GTF3A-206ENST00000470606 ALDH1L1O75891 902 aa10.45□□□□□ -0.74
GTF3A-206ENST00000470606 DDX58O95786 925 aaKnown RBP10.45□□□□□ -0.74
GTF3A-206ENST00000470606 GNAI3P08754 354 aa10.45□□□□□ -0.74
GTF3A-206ENST00000470606 ATP6V1AP38606 617 aa10.45□□□□□ -0.74
GTF3A-206ENST00000470606 RPAP2Q8IXW5 612 aaPredicted RBP10.45□□□□□ -0.74
GTF3A-206ENST00000470606 JARID2Q92833 1246 aaPredicted RBP10.45□□□□□ -0.74
GTF3A-206ENST00000470606 TEX13AQ9BXU3 409 aaPredicted RBP10.45□□□□□ -0.74
GTF3A-206ENST00000470606 ZBTB3Q9H5J0 574 aa10.45□□□□□ -0.74
GTF3A-206ENST00000470606 DCTPP1Q9H773 170 aa10.45□□□□□ -0.74
GTF3A-206ENST00000470606 ZNF831Q5JPB2 1677 aa10.45□□□□□ -0.74
GTF3A-206ENST00000470606 UTYO14607 1347 aa10.45□□□□□ -0.74
GTF3A-206ENST00000470606 STARD3NLO95772 234 aa10.45□□□□□ -0.74
GTF3A-206ENST00000470606 UBTFL1P0CB47 393 aaPredicted RBP10.45□□□□□ -0.74
GTF3A-206ENST00000470606 GCKRQ14397 625 aa10.45□□□□□ -0.74
GTF3A-206ENST00000470606 NUP98P52948 1817 aa10.44□□□□□ -0.74
GTF3A-206ENST00000470606 CRKLP46109 303 aaKnown RBP10.44□□□□□ -0.74
GTF3A-206ENST00000470606 ATP8B2P98198 1209 aa10.44□□□□□ -0.74
GTF3A-206ENST00000470606 NUCB1Q02818 461 aa10.44□□□□□ -0.74
GTF3A-206ENST00000470606 ZNF330Q9Y3S2 320 aaPredicted RBP10.44□□□□□ -0.74
GTF3A-206ENST00000470606 LY75O60449 1722 aa10.44□□□□□ -0.74
GTF3A-206ENST00000470606 GRM8O00222 908 aa10.43□□□□□ -0.74
GTF3A-206ENST00000470606 HLFQ16534 295 aa10.43□□□□□ -0.74
GTF3A-206ENST00000470606 EPHA10Q5JZY3 1008 aa10.43□□□□□ -0.74
GTF3A-206ENST00000470606 SMIM5Q71RC9 77 aa10.43□□□□□ -0.74
GTF3A-206ENST00000470606 LINC00116Q8NCU8 138 aa10.43□□□□□ -0.74
GTF3A-206ENST00000470606 TAF1LQ8IZX4 1826 aa10.43□□□□□ -0.74
GTF3A-206ENST00000470606 EIF5P55010 431 aaKnown RBP10.43□□□□□ -0.74
GTF3A-206ENST00000470606 CASP7P55210 303 aa10.43□□□□□ -0.74
GTF3A-206ENST00000470606 PELP1Q8IZL8 1130 aaKnown RBP10.43□□□□□ -0.74
GTF3A-206ENST00000470606 SUCLG2Q96I99 432 aa10.43□□□□□ -0.74
GTF3A-206ENST00000470606 LNPKQ9C0E8 428 aa10.43□□□□□ -0.74
GTF3A-206ENST00000470606 IBTKQ9P2D0 1353 aaPredicted RBP10.42□□□□□ -0.74
GTF3A-206ENST00000470606 POLA2Q14181 598 aa10.42□□□□□ -0.74
GTF3A-206ENST00000470606 PPP1R42Q7Z4L9 355 aa10.42□□□□□ -0.74
GTF3A-206ENST00000470606 AMIGO3Q86WK7 504 aa10.42□□□□□ -0.74
GTF3A-206ENST00000470606 SSH3Q8TE77 659 aa10.42□□□□□ -0.74
GTF3A-206ENST00000470606 SMARCC1Q92922 1105 aaPredicted RBP10.42□□□□□ -0.74
GTF3A-206ENST00000470606 GCC1Q96CN9 775 aa10.42□□□□□ -0.74
GTF3A-206ENST00000470606 C9orf78Q9NZ63 289 aaPredicted RBP10.42□□□□□ -0.74
GTF3A-206ENST00000470606 IL6STP40189 918 aaPredicted RBP10.41□□□□□ -0.74
GTF3A-206ENST00000470606 RBM6P78332 1123 aaKnown RBP10.41□□□□□ -0.74
GTF3A-206ENST00000470606 ANKRD45Q5TZF3 282 aa10.41□□□□□ -0.74
GTF3A-206ENST00000470606 KRT27Q7Z3Y8 459 aa10.41□□□□□ -0.74
GTF3A-206ENST00000470606 CHD1LQ86WJ1 897 aa10.41□□□□□ -0.74
GTF3A-206ENST00000470606 CCDC87Q9NVE4 849 aa10.41□□□□□ -0.74
GTF3A-206ENST00000470606 TBC1D2BQ9UPU7 963 aa10.41□□□□□ -0.74
GTF3A-206ENST00000470606 MAP3K15Q6ZN16 1313 aa10.41□□□□□ -0.74
GTF3A-206ENST00000470606 NEXNQ0ZGT2 675 aa10.41□□□□□ -0.74
GTF3A-206ENST00000470606 MTX1Q13505 466 aa10.41□□□□□ -0.74
GTF3A-206ENST00000470606 ZNF772Q68DY9 489 aaPredicted RBP10.41□□□□□ -0.74
GTF3A-206ENST00000470606 POTEAQ6S8J7 498 aa10.41□□□□□ -0.74
GTF3A-206ENST00000470606 C16orf71Q8IYS4 520 aaPredicted RBP10.41□□□□□ -0.74
GTF3A-206ENST00000470606 OTUD7AQ8TE49 926 aaPredicted RBP10.41□□□□□ -0.74
GTF3A-206ENST00000470606 ISCA1Q9BUE6 129 aa10.41□□□□□ -0.74
GTF3A-206ENST00000470606 BICC1Q9H694 974 aaKnown RBP10.41□□□□□ -0.74
GTF3A-206ENST00000470606 EXOC6BQ9Y2D4 811 aa10.41□□□□□ -0.74
GTF3A-206ENST00000470606 ANKRD36CQ5JPF3 1778 aa10.41□□□□□ -0.74
GTF3A-206ENST00000470606 H7C1W4 665 aa10.4□□□□□ -0.74
GTF3A-206ENST00000470606 APBB1O00213 710 aa10.4□□□□□ -0.74
GTF3A-206ENST00000470606 SMARCA5O60264 1052 aaPredicted RBP10.4□□□□□ -0.74
GTF3A-206ENST00000470606 TCIRG1Q13488 830 aa10.4□□□□□ -0.74
GTF3A-206ENST00000470606 GIGYF2Q6Y7W6 1299 aaKnown RBP10.4□□□□□ -0.74
GTF3A-206ENST00000470606 UBE3BQ7Z3V4 1068 aa10.4□□□□□ -0.74
GTF3A-206ENST00000470606 LRRC4BQ9NT99 713 aa10.4□□□□□ -0.74
GTF3A-206ENST00000470606 A0A087WZG4 1122 aa10.39□□□□□ -0.75
GTF3A-206ENST00000470606 SRGAP3O43295 1099 aa10.39□□□□□ -0.75
GTF3A-206ENST00000470606 C8orf34Q49A92 452 aa10.39□□□□□ -0.75
GTF3A-206ENST00000470606 RTL5Q5HYW3 569 aaPredicted RBP10.39□□□□□ -0.75
GTF3A-206ENST00000470606 SYNE4Q8N205 404 aa10.39□□□□□ -0.75
GTF3A-206ENST00000470606 BCL11BQ9C0K0 894 aaPredicted RBP10.39□□□□□ -0.75
GTF3A-206ENST00000470606 TRIM37O94972 964 aa10.39□□□□□ -0.75
GTF3A-206ENST00000470606 DZIP3Q86Y13 1208 aaKnown RBP10.39□□□□□ -0.75
GTF3A-206ENST00000470606 ARXQ96QS3 562 aa10.39□□□□□ -0.75
GTF3A-206ENST00000470606 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.39□□□□□ -0.75
GTF3A-206ENST00000470606 UBN2Q6ZU65 1347 aa10.38□□□□□ -0.75
GTF3A-206ENST00000470606 HMMRO75330 724 aa10.38□□□□□ -0.75
GTF3A-206ENST00000470606 TRIM28Q13263 835 aaKnown RBP10.38□□□□□ -0.75
GTF3A-206ENST00000470606 FAM196AQ6ZSG2 479 aa10.38□□□□□ -0.75
GTF3A-206ENST00000470606 CCDC191Q8NCU4 936 aa10.38□□□□□ -0.75
GTF3A-206ENST00000470606 PA2G4Q9UQ80 394 aaKnown RBP10.38□□□□□ -0.75
GTF3A-206ENST00000470606 COL15A1P39059 1388 aa10.37□□□□□ -0.75
GTF3A-206ENST00000470606 CAMTA2O94983 1202 aa10.37□□□□□ -0.75
GTF3A-206ENST00000470606 GPTP24298 496 aa10.37□□□□□ -0.75
GTF3A-206ENST00000470606 FOXO4P98177 505 aa10.37□□□□□ -0.75
GTF3A-206ENST00000470606 KIF6Q6ZMV9 814 aa10.37□□□□□ -0.75
GTF3A-206ENST00000470606 PROM2Q8N271 834 aa10.37□□□□□ -0.75
GTF3A-206ENST00000470606 KLHDC4Q8TBB5 520 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms