RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 MPHOSPH6Q99547 160 aaKnown RBP7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 PLVAPQ9BX97 442 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 BACH2Q9BYV9 841 aa7.16□□□□□ -1.26
CCDC144A-212ENST00000470068 IGSF3O75054 1194 aa7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 SH3BGRP55822 239 aaPredicted RBP7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 STK38Q15208 465 aa7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 TWISTNBQ3B726 338 aaPredicted RBP7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 SMARCC1Q92922 1105 aaPredicted RBP7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 CCDC94Q9BW85 323 aaPredicted RBP7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 RAD50Q92878 1312 aa7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 URB2Q14146 1524 aaKnown RBP7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 LDHCP07864 332 aa7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 TERF1P54274 439 aa7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 ANKRD24Q8TF21 1146 aa7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 DDX17Q92841 729 aaKnown RBP7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 V9GYY5 206 aaPredicted RBP7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 EXOC6Q8TAG9 804 aa7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 KCNG1Q9UIX4 513 aa7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 PNMA2Q9UL42 364 aa7.15□□□□□ -1.26
CCDC144A-212ENST00000470068 TCP11L2Q8N4U5 519 aa7.15□□□□□ -1.27
CCDC144A-212ENST00000470068 FERMT1Q9BQL6 677 aa7.15□□□□□ -1.27
CCDC144A-212ENST00000470068 FSD1Q9BTV5 496 aa7.15□□□□□ -1.27
CCDC144A-212ENST00000470068 STMN4Q9H169 189 aaPredicted RBP7.15□□□□□ -1.27
CCDC144A-212ENST00000470068 HYPKQ9NX55 129 aa7.15□□□□□ -1.27
CCDC144A-212ENST00000470068 TMOD3Q9NYL9 352 aa7.15□□□□□ -1.27
CCDC144A-212ENST00000470068 PAXBP1Q9Y5B6 917 aa7.15□□□□□ -1.27
CCDC144A-212ENST00000470068 KAT6BQ8WYB5 2073 aa7.15□□□□□ -1.27
CCDC144A-212ENST00000470068 AOX1Q06278 1338 aa7.15□□□□□ -1.27
CCDC144A-212ENST00000470068 GNAQP50148 359 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 MCTP2Q6DN12 878 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 MCTP1Q6DN14 999 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 CCDC150Q8NCX0 1101 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 TSG101Q99816 390 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 GLT8D2Q9H1C3 349 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 RMND1Q9NWS8 449 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 TMOD2Q9NZR1 351 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 PIK3C2GO75747 1445 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 SPTY2D1Q68D10 685 aaPredicted RBP7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 BLOC1S2Q6QNY1 142 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 UIMC1Q96RL1 719 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 IQSEC3Q9UPP2 1182 aaPredicted RBP7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 COG6Q9Y2V7 657 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 CCDC61Q9Y6R9 512 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 UGGT2Q9NYU1 1516 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 ANKRD18BA2A2Z9 1011 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 PPP2R5BQ15173 497 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 CTAGE1Q96RT6 745 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 USP25Q9UHP3 1055 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 RTCBQ9Y3I0 505 aaKnown RBP7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 CETN1Q12798 172 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 DUSP27Q5VZP5 1158 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 RPGRQ92834 1020 aaKnown RBP7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 ERCC6L2Q5T890 1561 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 PTPRMP28827 1452 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 B4DLN1 442 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 MRPL12P52815 198 aaKnown RBP7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 SLFN5Q08AF3 891 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 CTR9Q6PD62 1173 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 ZSCAN30Q86W11 494 aa7.14□□□□□ -1.27
CCDC144A-212ENST00000470068 GCOM1H8Y6P7 765 aaPredicted RBP7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 HOXB7P09629 217 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 MYZAPP0CAP1 466 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 CABP4P57796 275 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 CCDC183Q5T5S1 534 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 GIGYF2Q6Y7W6 1299 aaKnown RBP7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 CHD1LQ86WJ1 897 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 NUTM1Q86Y26 1132 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 ZGPATQ8N5A5 531 aaKnown RBP7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 TAF4BQ92750 862 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 CALCOCO1Q9P1Z2 691 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 USO1O60763 962 aaKnown RBP7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 STARD3NLO95772 234 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 ST5P78524 1137 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 EZH2Q15910 746 aaKnown RBP7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 NBPF1Q3BBV0 1214 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 BBXQ8WY36 941 aaPredicted RBP7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 SIRT1Q96EB6 747 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 UQCRFS1P1P0C7P4 283 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 HDAC1Q13547 482 aaPredicted RBP7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 ALDH1L1O75891 902 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 CKAP4Q07065 602 aaKnown RBP7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 BMP2KLQ5H9B9 411 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 TRIM5Q9C035 493 aa7.13□□□□□ -1.27
CCDC144A-212ENST00000470068 NFKBIBQ15653 356 aa7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 SNX21Q969T3 373 aa7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 CEP126Q9P2H0 1117 aa7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 USH1CQ9Y6N9 552 aa7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 POLR3AO14802 1390 aaPredicted RBP7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 CFAP74Q9C0B2 1584 aa7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 CCDC69A6NI79 296 aa7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 APPP05067 770 aa7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 MAP3K11Q16584 847 aa7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 FKBP15Q5T1M5 1219 aa7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 NUP62CLQ9H1M0 184 aa7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 TNMDQ9H2S6 317 aa7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 NPHP4O75161 1426 aaPredicted RBP7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 H0YIN7 160 aa7.12□□□□□ -1.27
CCDC144A-212ENST00000470068 USP5P45974 858 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms