RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 RBM42Q9BTD8 480 aaKnown RBP11.77□□□□□ -0.53
PRPF3-202ENST00000467329 BACH2Q9BYV9 841 aa11.77□□□□□ -0.53
PRPF3-202ENST00000467329 COL5A3P25940 1745 aaPredicted RBP11.77□□□□□ -0.53
PRPF3-202ENST00000467329 SKAP1Q86WV1 359 aa11.76□□□□□ -0.53
PRPF3-202ENST00000467329 SYTL4Q96C24 671 aaPredicted RBP11.76□□□□□ -0.53
PRPF3-202ENST00000467329 SLC4A9Q96Q91 983 aa11.76□□□□□ -0.53
PRPF3-202ENST00000467329 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
PRPF3-202ENST00000467329 PALLDQ8WX93 1383 aa11.76□□□□□ -0.53
PRPF3-202ENST00000467329 MYD88Q99836 296 aa11.76□□□□□ -0.53
PRPF3-202ENST00000467329 NBPF7P0C2Y1 421 aaPredicted RBP11.75□□□□□ -0.53
PRPF3-202ENST00000467329 GCKRQ14397 625 aa11.75□□□□□ -0.53
PRPF3-202ENST00000467329 CWF19L2Q2TBE0 894 aaKnown RBP11.75□□□□□ -0.53
PRPF3-202ENST00000467329 ANKRD45Q5TZF3 282 aa11.75□□□□□ -0.53
PRPF3-202ENST00000467329 RBM19Q9Y4C8 960 aaKnown RBP11.75□□□□□ -0.53
PRPF3-202ENST00000467329 IL6STP40189 918 aaPredicted RBP11.74□□□□□ -0.53
PRPF3-202ENST00000467329 KIF6Q6ZMV9 814 aa11.74□□□□□ -0.53
PRPF3-202ENST00000467329 ACSBG1Q96GR2 724 aa11.74□□□□□ -0.53
PRPF3-202ENST00000467329 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
PRPF3-202ENST00000467329 BTAF1O14981 1849 aa11.74□□□□□ -0.53
PRPF3-202ENST00000467329 ANKRD36CQ5JPF3 1778 aa11.74□□□□□ -0.53
PRPF3-202ENST00000467329 RAB11FIP3O75154 756 aa11.74□□□□□ -0.53
PRPF3-202ENST00000467329 TRIM28Q13263 835 aaKnown RBP11.74□□□□□ -0.53
PRPF3-202ENST00000467329 TTLL7Q6ZT98 887 aa11.74□□□□□ -0.53
PRPF3-202ENST00000467329 LOC102724428A0A0B4J2F2 783 aa11.74□□□□□ -0.53
PRPF3-202ENST00000467329 PIP4K2AP48426 406 aaPredicted RBP11.74□□□□□ -0.53
PRPF3-202ENST00000467329 SIK1P57059 783 aa11.74□□□□□ -0.53
PRPF3-202ENST00000467329 HSP90AB4PQ58FF6 505 aa11.74□□□□□ -0.53
PRPF3-202ENST00000467329 LNPKQ9C0E8 428 aa11.74□□□□□ -0.53
PRPF3-202ENST00000467329 SBF2Q86WG5 1849 aa11.73□□□□□ -0.53
PRPF3-202ENST00000467329 MAP3K15Q6ZN16 1313 aa11.73□□□□□ -0.53
PRPF3-202ENST00000467329 PNMA6EA0A0J9YXQ4 647 aa11.73□□□□□ -0.53
PRPF3-202ENST00000467329 HSP90AB3PQ58FF7 597 aa11.73□□□□□ -0.53
PRPF3-202ENST00000467329 CCDC191Q8NCU4 936 aa11.73□□□□□ -0.53
PRPF3-202ENST00000467329 ISCA1Q9BUE6 129 aa11.73□□□□□ -0.53
PRPF3-202ENST00000467329 ERVV-1B6SEH8 477 aa11.73□□□□□ -0.53
PRPF3-202ENST00000467329 C8orf34Q49A92 452 aa11.73□□□□□ -0.53
PRPF3-202ENST00000467329 PPP1R42Q7Z4L9 355 aa11.73□□□□□ -0.53
PRPF3-202ENST00000467329 QTRT2Q9H974 415 aaKnown RBP11.73□□□□□ -0.53
PRPF3-202ENST00000467329 CCDC87Q9NVE4 849 aa11.73□□□□□ -0.53
PRPF3-202ENST00000467329 NOP58Q9Y2X3 529 aaKnown RBP11.73□□□□□ -0.53
PRPF3-202ENST00000467329 A0A0G2JS52 829 aa11.72□□□□□ -0.53
PRPF3-202ENST00000467329 RGL2O15211 777 aa11.72□□□□□ -0.53
PRPF3-202ENST00000467329 MYT1Q01538 1121 aa11.72□□□□□ -0.53
PRPF3-202ENST00000467329 SEPT12Q8IYM1 358 aa11.72□□□□□ -0.53
PRPF3-202ENST00000467329 SUCLG2Q96I99 432 aa11.72□□□□□ -0.53
PRPF3-202ENST00000467329 CWC25Q9NXE8 425 aaPredicted RBP11.72□□□□□ -0.53
PRPF3-202ENST00000467329 LY75O60449 1722 aa11.72□□□□□ -0.53
PRPF3-202ENST00000467329 H7C1W4 665 aa11.72□□□□□ -0.53
PRPF3-202ENST00000467329 CASP7P55210 303 aa11.72□□□□□ -0.53
PRPF3-202ENST00000467329 TCIRG1Q13488 830 aa11.72□□□□□ -0.53
PRPF3-202ENST00000467329 ZNF772Q68DY9 489 aaPredicted RBP11.72□□□□□ -0.53
PRPF3-202ENST00000467329 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
PRPF3-202ENST00000467329 BMP2KLQ5H9B9 411 aa11.71□□□□□ -0.53
PRPF3-202ENST00000467329 INTS5Q6P9B9 1019 aaKnown RBP11.71□□□□□ -0.53
PRPF3-202ENST00000467329 CNTNAP4Q9C0A0 1308 aa11.71□□□□□ -0.54
PRPF3-202ENST00000467329 SRGAP3O43295 1099 aa11.71□□□□□ -0.54
PRPF3-202ENST00000467329 KCNQ2O43526 872 aa11.71□□□□□ -0.54
PRPF3-202ENST00000467329 EIF5P55010 431 aaKnown RBP11.71□□□□□ -0.54
PRPF3-202ENST00000467329 RABL6Q3YEC7 729 aaPredicted RBP11.71□□□□□ -0.54
PRPF3-202ENST00000467329 KAZALD1Q96I82 304 aa11.71□□□□□ -0.54
PRPF3-202ENST00000467329 LRRCC1Q9C099 1032 aa11.71□□□□□ -0.54
PRPF3-202ENST00000467329 ZBTB1Q9Y2K1 713 aa11.71□□□□□ -0.54
PRPF3-202ENST00000467329 ITPK1Q13572 414 aa11.7□□□□□ -0.54
PRPF3-202ENST00000467329 GIGYF2Q6Y7W6 1299 aaKnown RBP11.7□□□□□ -0.54
PRPF3-202ENST00000467329 BCORQ6W2J9 1755 aa11.7□□□□□ -0.54
PRPF3-202ENST00000467329 CRKLP46109 303 aaKnown RBP11.7□□□□□ -0.54
PRPF3-202ENST00000467329 ERC1Q8IUD2 1116 aa11.7□□□□□ -0.54
PRPF3-202ENST00000467329 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
PRPF3-202ENST00000467329 AOX1Q06278 1338 aa11.69□□□□□ -0.54
PRPF3-202ENST00000467329 A0A087WZG4 1122 aa11.69□□□□□ -0.54
PRPF3-202ENST00000467329 RC3H1Q5TC82 1133 aaKnown RBP11.69□□□□□ -0.54
PRPF3-202ENST00000467329 PLEKHM2Q8IWE5 1019 aa11.69□□□□□ -0.54
PRPF3-202ENST00000467329 OSBPL3Q9H4L5 887 aa11.69□□□□□ -0.54
PRPF3-202ENST00000467329 BICC1Q9H694 974 aaKnown RBP11.69□□□□□ -0.54
PRPF3-202ENST00000467329 KAT6BQ8WYB5 2073 aa11.69□□□□□ -0.54
PRPF3-202ENST00000467329 NPM2Q86SE8 214 aaKnown RBP11.69□□□□□ -0.54
PRPF3-202ENST00000467329 KIF1BPQ96EK5 621 aa11.69□□□□□ -0.54
PRPF3-202ENST00000467329 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
PRPF3-202ENST00000467329 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
PRPF3-202ENST00000467329 PLA2G12BQ9BX93 195 aa11.68□□□□□ -0.54
PRPF3-202ENST00000467329 BCL11BQ9C0K0 894 aaPredicted RBP11.68□□□□□ -0.54
PRPF3-202ENST00000467329 SALL3Q9BXA9 1300 aa11.68□□□□□ -0.54
PRPF3-202ENST00000467329 CDHR2Q9BYE9 1310 aa11.68□□□□□ -0.54
PRPF3-202ENST00000467329 EIF5BO60841 1220 aaKnown RBP11.68□□□□□ -0.54
PRPF3-202ENST00000467329 SURF6O75683 361 aaKnown RBP11.68□□□□□ -0.54
PRPF3-202ENST00000467329 PCCAP05165 728 aaPredicted RBP11.68□□□□□ -0.54
PRPF3-202ENST00000467329 RBM6P78332 1123 aaKnown RBP11.68□□□□□ -0.54
PRPF3-202ENST00000467329 UBE3BQ7Z3V4 1068 aa11.68□□□□□ -0.54
PRPF3-202ENST00000467329 NUP98P52948 1817 aa11.67□□□□□ -0.54
PRPF3-202ENST00000467329 BRWD3Q6RI45 1802 aa11.67□□□□□ -0.54
PRPF3-202ENST00000467329 HMGB2P26583 209 aaKnown RBP11.67□□□□□ -0.54
PRPF3-202ENST00000467329 FAM196AQ6ZSG2 479 aa11.67□□□□□ -0.54
PRPF3-202ENST00000467329 DZIP3Q86Y13 1208 aaKnown RBP11.67□□□□□ -0.54
PRPF3-202ENST00000467329 STAP2Q9UGK3 403 aa11.67□□□□□ -0.54
PRPF3-202ENST00000467329 SCN7AQ01118 1682 aa11.67□□□□□ -0.54
PRPF3-202ENST00000467329 MYH14Q7Z406 1995 aaKnown RBP11.67□□□□□ -0.54
PRPF3-202ENST00000467329 TTC22Q5TAA0 569 aa11.67□□□□□ -0.54
PRPF3-202ENST00000467329 TAF1LQ8IZX4 1826 aa11.66□□□□□ -0.54
PRPF3-202ENST00000467329 RHPN1Q8TCX5 695 aa11.66□□□□□ -0.54
PRPF3-202ENST00000467329 COPRSQ9NQ92 184 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms