RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 TM4SF1P30408 202 aa9.53□□□□□ -0.88
RPUSD3-212ENST00000466141 TNNT2P45379 298 aaPredicted RBP9.53□□□□□ -0.88
RPUSD3-212ENST00000466141 SETQ01105 290 aaPredicted RBP9.53□□□□□ -0.88
RPUSD3-212ENST00000466141 EIF4A2Q14240 407 aaKnown RBP9.53□□□□□ -0.88
RPUSD3-212ENST00000466141 USPL1Q5W0Q7 1092 aa9.53□□□□□ -0.88
RPUSD3-212ENST00000466141 MORC1Q86VD1 984 aa9.53□□□□□ -0.88
RPUSD3-212ENST00000466141 CCDC88AQ3V6T2 1871 aa9.53□□□□□ -0.88
RPUSD3-212ENST00000466141 CARMIL3Q8ND23 1372 aa9.52□□□□□ -0.88
RPUSD3-212ENST00000466141 AFDNP55196 1824 aaKnown RBP9.52□□□□□ -0.89
RPUSD3-212ENST00000466141 CABP4P57796 275 aa9.52□□□□□ -0.89
RPUSD3-212ENST00000466141 INTS5Q6P9B9 1019 aaKnown RBP9.52□□□□□ -0.89
RPUSD3-212ENST00000466141 FTSJ3Q8IY81 847 aaKnown RBP9.52□□□□□ -0.89
RPUSD3-212ENST00000466141 ZFP91Q96JP5 570 aaPredicted RBP9.52□□□□□ -0.89
RPUSD3-212ENST00000466141 DLEC1Q9Y238 1755 aa9.51□□□□□ -0.89
RPUSD3-212ENST00000466141 NFIXQ14938 502 aa9.51□□□□□ -0.89
RPUSD3-212ENST00000466141 FAM161AQ3B820 660 aa9.51□□□□□ -0.89
RPUSD3-212ENST00000466141 CC2D1BQ5T0F9 858 aaKnown RBP9.51□□□□□ -0.89
RPUSD3-212ENST00000466141 ZNF530Q6P9A1 599 aaPredicted RBP9.51□□□□□ -0.89
RPUSD3-212ENST00000466141 PLCD4Q9BRC7 762 aa9.51□□□□□ -0.89
RPUSD3-212ENST00000466141 CREBZFQ9NS37 354 aa9.51□□□□□ -0.89
RPUSD3-212ENST00000466141 ZNF219Q9P2Y4 722 aaPredicted RBP9.51□□□□□ -0.89
RPUSD3-212ENST00000466141 CNTNAP1P78357 1384 aa9.5□□□□□ -0.89
RPUSD3-212ENST00000466141 SCN11AQ9UI33 1791 aa9.5□□□□□ -0.89
RPUSD3-212ENST00000466141 ZPR1O75312 459 aa9.5□□□□□ -0.89
RPUSD3-212ENST00000466141 NEFMP07197 916 aa9.5□□□□□ -0.89
RPUSD3-212ENST00000466141 CHADLQ6NUI6 762 aa9.5□□□□□ -0.89
RPUSD3-212ENST00000466141 C2CD5Q86YS7 1000 aa9.5□□□□□ -0.89
RPUSD3-212ENST00000466141 DNAJC10Q8IXB1 793 aa9.5□□□□□ -0.89
RPUSD3-212ENST00000466141 TTLL6Q8N841 843 aa9.5□□□□□ -0.89
RPUSD3-212ENST00000466141 NFATC2IPQ8NCF5 419 aa9.5□□□□□ -0.89
RPUSD3-212ENST00000466141 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
RPUSD3-212ENST00000466141 NRXN2Q9P2S2 1712 aa9.5□□□□□ -0.89
RPUSD3-212ENST00000466141 PTMAP06454 111 aaKnown RBP9.49□□□□□ -0.89
RPUSD3-212ENST00000466141 HSP90AB1P08238 724 aaKnown RBP9.49□□□□□ -0.89
RPUSD3-212ENST00000466141 MCCP23508 829 aa9.49□□□□□ -0.89
RPUSD3-212ENST00000466141 LBX1P52954 281 aa9.49□□□□□ -0.89
RPUSD3-212ENST00000466141 CC2D2BQ6DHV5 1058 aa9.49□□□□□ -0.89
RPUSD3-212ENST00000466141 AEBP1Q8IUX7 1158 aa9.49□□□□□ -0.89
RPUSD3-212ENST00000466141 BCL2L12Q9HB09 334 aa9.49□□□□□ -0.89
RPUSD3-212ENST00000466141 PRDM10Q9NQV6 1147 aa9.49□□□□□ -0.89
RPUSD3-212ENST00000466141 SOS1Q07889 1333 aaPredicted RBP9.49□□□□□ -0.89
RPUSD3-212ENST00000466141 DDNO94850 711 aaPredicted RBP9.48□□□□□ -0.89
RPUSD3-212ENST00000466141 SERPINB2P05120 415 aa9.48□□□□□ -0.89
RPUSD3-212ENST00000466141 CTCFP49711 727 aaPredicted RBP9.48□□□□□ -0.89
RPUSD3-212ENST00000466141 VEGFBP49765 207 aa9.48□□□□□ -0.89
RPUSD3-212ENST00000466141 MTHFSP49914 203 aa9.48□□□□□ -0.89
RPUSD3-212ENST00000466141 ERFEQ4G0M1 354 aa9.48□□□□□ -0.89
RPUSD3-212ENST00000466141 PLEKHO1Q53GL0 409 aaPredicted RBP9.48□□□□□ -0.89
RPUSD3-212ENST00000466141 TMCO4Q5TGY1 634 aa9.48□□□□□ -0.89
RPUSD3-212ENST00000466141 DPY19L2Q6NUT2 758 aa9.48□□□□□ -0.89
RPUSD3-212ENST00000466141 CCDC24Q8N4L8 307 aa9.48□□□□□ -0.89
RPUSD3-212ENST00000466141 AIDAQ96BJ3 306 aa9.48□□□□□ -0.89
RPUSD3-212ENST00000466141 ABHD8Q96I13 439 aa9.48□□□□□ -0.89
RPUSD3-212ENST00000466141 C21orf2O43822 256 aa9.47□□□□□ -0.89
RPUSD3-212ENST00000466141 SLC4A2P04920 1241 aa9.47□□□□□ -0.89
RPUSD3-212ENST00000466141 GRIPAP1Q4V328 841 aa9.47□□□□□ -0.89
RPUSD3-212ENST00000466141 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
RPUSD3-212ENST00000466141 BICDL1Q6ZP65 573 aa9.47□□□□□ -0.89
RPUSD3-212ENST00000466141 FOXD4L4Q8WXT5 416 aaPredicted RBP9.47□□□□□ -0.89
RPUSD3-212ENST00000466141 ZNF428Q96B54 188 aa9.47□□□□□ -0.89
RPUSD3-212ENST00000466141 TRAIPQ9BWF2 469 aa9.47□□□□□ -0.89
RPUSD3-212ENST00000466141 ZBTB1Q9Y2K1 713 aa9.47□□□□□ -0.89
RPUSD3-212ENST00000466141 PASKQ96RG2 1323 aa9.47□□□□□ -0.89
RPUSD3-212ENST00000466141 COL11A2P13942 1736 aaPredicted RBP9.47□□□□□ -0.89
RPUSD3-212ENST00000466141 COL15A1P39059 1388 aa9.47□□□□□ -0.89
RPUSD3-212ENST00000466141 ANKRD31Q8N7Z5 1873 aa9.47□□□□□ -0.89
RPUSD3-212ENST00000466141 E9PSI1 815 aa9.46□□□□□ -0.9
RPUSD3-212ENST00000466141 H0YIN7 160 aa9.46□□□□□ -0.9
RPUSD3-212ENST00000466141 IL13P35225 146 aa9.46□□□□□ -0.9
RPUSD3-212ENST00000466141 SLC39A6Q13433 755 aa9.46□□□□□ -0.9
RPUSD3-212ENST00000466141 C1orf141Q5JVX7 400 aa9.46□□□□□ -0.9
RPUSD3-212ENST00000466141 ZNF622Q969S3 477 aaKnown RBP eCLIP9.46□□□□□ -0.9
RPUSD3-212ENST00000466141 WBP1LQ9NX94 342 aa9.46□□□□□ -0.9
RPUSD3-212ENST00000466141 NARFQ9UHQ1 456 aa9.46□□□□□ -0.9
RPUSD3-212ENST00000466141 SIPA1L3O60292 1781 aaPredicted RBP9.45□□□□□ -0.9
RPUSD3-212ENST00000466141 FER1L6Q2WGJ9 1857 aa9.45□□□□□ -0.9
RPUSD3-212ENST00000466141 DLG5Q8TDM6 1919 aa9.45□□□□□ -0.9
RPUSD3-212ENST00000466141 DICER1Q9UPY3 1922 aaKnown RBP9.45□□□□□ -0.9
RPUSD3-212ENST00000466141 HSPA8P11142 646 aaKnown RBP9.45□□□□□ -0.9
RPUSD3-212ENST00000466141 CYP19A1P11511 503 aaPredicted RBP9.45□□□□□ -0.9
RPUSD3-212ENST00000466141 PPP2R1AP30153 589 aa9.45□□□□□ -0.9
RPUSD3-212ENST00000466141 AMOTQ4VCS5 1084 aa9.45□□□□□ -0.9
RPUSD3-212ENST00000466141 SECISBP2LQ93073 1101 aaKnown RBP9.45□□□□□ -0.9
RPUSD3-212ENST00000466141 MRC1P22897 1456 aa9.45□□□□□ -0.9
RPUSD3-212ENST00000466141 ZNF316A6NFI3 1004 aaPredicted RBP9.44□□□□□ -0.9
RPUSD3-212ENST00000466141 CANXP27824 592 aaKnown RBP9.44□□□□□ -0.9
RPUSD3-212ENST00000466141 DDX10Q13206 875 aaKnown RBP9.44□□□□□ -0.9
RPUSD3-212ENST00000466141 RTL5Q5HYW3 569 aaPredicted RBP9.44□□□□□ -0.9
RPUSD3-212ENST00000466141 CNPY4Q8N129 248 aa9.44□□□□□ -0.9
RPUSD3-212ENST00000466141 TAOK3Q9H2K8 898 aa9.44□□□□□ -0.9
RPUSD3-212ENST00000466141 LGR6Q9HBX8 967 aa9.44□□□□□ -0.9
RPUSD3-212ENST00000466141 CCDC85CA6NKD9 419 aa9.43□□□□□ -0.9
RPUSD3-212ENST00000466141 TMEM88BA6NKF7 163 aa9.43□□□□□ -0.9
RPUSD3-212ENST00000466141 ITGBL1O95965 494 aaPredicted RBP9.43□□□□□ -0.9
RPUSD3-212ENST00000466141 MFAP1P55081 439 aaKnown RBP9.43□□□□□ -0.9
RPUSD3-212ENST00000466141 CNGB1Q14028 1251 aaPredicted RBP9.43□□□□□ -0.9
RPUSD3-212ENST00000466141 EAPPQ56P03 285 aaPredicted RBP9.43□□□□□ -0.9
RPUSD3-212ENST00000466141 TBC1D9BQ66K14 1250 aa9.43□□□□□ -0.9
RPUSD3-212ENST00000466141 LDHDQ86WU2 507 aa9.43□□□□□ -0.9
RPUSD3-212ENST00000466141 TAF1DQ9H5J8 278 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms