RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 REPIN1Q9BWE0 567 aaKnown RBP8.8□□□□□ -1
CLSTN1-204ENST00000464286 API5Q9BZZ5 524 aaKnown RBP8.8□□□□□ -1
CLSTN1-204ENST00000464286 C14orf93Q9H972 538 aaKnown RBP8.8□□□□□ -1
CLSTN1-204ENST00000464286 PIK3R4Q99570 1358 aa8.8□□□□□ -1
CLSTN1-204ENST00000464286 CDC42BPGQ6DT37 1551 aa8.79□□□□□ -1
CLSTN1-204ENST00000464286 ATAD2Q6PL18 1390 aa8.79□□□□□ -1
CLSTN1-204ENST00000464286 TPM3P06753 285 aa8.79□□□□□ -1
CLSTN1-204ENST00000464286 TMPOP42166 694 aaKnown RBP8.79□□□□□ -1
CLSTN1-204ENST00000464286 RNF19BQ6ZMZ0 732 aa8.79□□□□□ -1
CLSTN1-204ENST00000464286 TRIM67Q6ZTA4 783 aa8.79□□□□□ -1
CLSTN1-204ENST00000464286 ZNF598Q86UK7 904 aaKnown RBP8.79□□□□□ -1
CLSTN1-204ENST00000464286 KRI1Q8N9T8 703 aaKnown RBP8.79□□□□□ -1
CLSTN1-204ENST00000464286 SSH1Q8WYL5 1049 aa8.79□□□□□ -1
CLSTN1-204ENST00000464286 FAM217BQ9NTX9 383 aaPredicted RBP8.79□□□□□ -1
CLSTN1-204ENST00000464286 TERF2IPQ9NYB0 399 aa8.79□□□□□ -1
CLSTN1-204ENST00000464286 NOB1Q9ULX3 412 aaKnown RBP8.79□□□□□ -1
CLSTN1-204ENST00000464286 RRP7AQ9Y3A4 280 aaKnown RBP8.79□□□□□ -1
CLSTN1-204ENST00000464286 LETM1O95202 739 aaPredicted RBP8.78□□□□□ -1
CLSTN1-204ENST00000464286 TMEM57Q8N5G2 664 aa8.78□□□□□ -1
CLSTN1-204ENST00000464286 PDLIM2Q96JY6 352 aa8.78□□□□□ -1
CLSTN1-204ENST00000464286 PRIMPOLQ96LW4 560 aa8.78□□□□□ -1
CLSTN1-204ENST00000464286 BCL2L13Q9BXK5 485 aa8.78□□□□□ -1
CLSTN1-204ENST00000464286 ZKSCAN5Q9Y2L8 839 aa8.78□□□□□ -1
CLSTN1-204ENST00000464286 PTCH1Q13635 1447 aa8.78□□□□□ -1
CLSTN1-204ENST00000464286 ERBB4Q15303 1308 aa8.78□□□□□ -1
CLSTN1-204ENST00000464286 MCCP23508 829 aa8.77□□□□□ -1.01
CLSTN1-204ENST00000464286 GNAI1P63096 354 aa8.77□□□□□ -1.01
CLSTN1-204ENST00000464286 KIAA2012Q0VF49 1180 aa8.77□□□□□ -1.01
CLSTN1-204ENST00000464286 UVSSAQ2YD98 709 aa8.77□□□□□ -1.01
CLSTN1-204ENST00000464286 ANKRD45Q5TZF3 282 aa8.77□□□□□ -1.01
CLSTN1-204ENST00000464286 LNPKQ9C0E8 428 aa8.77□□□□□ -1.01
CLSTN1-204ENST00000464286 MROH2AA6NES4 1674 aa8.77□□□□□ -1.01
CLSTN1-204ENST00000464286 ADGRB1O14514 1584 aa8.77□□□□□ -1.01
CLSTN1-204ENST00000464286 ADGRF5Q8IZF2 1346 aa8.77□□□□□ -1.01
CLSTN1-204ENST00000464286 CHD1O14646 1710 aa8.77□□□□□ -1.01
CLSTN1-204ENST00000464286 DIAPH1O60610 1272 aaKnown RBP8.76□□□□□ -1.01
CLSTN1-204ENST00000464286 ZSCAN23Q3MJ62 389 aa8.76□□□□□ -1.01
CLSTN1-204ENST00000464286 MSS51Q4VC12 460 aa8.76□□□□□ -1.01
CLSTN1-204ENST00000464286 TBC1D9Q6ZT07 1266 aa8.76□□□□□ -1.01
CLSTN1-204ENST00000464286 GAS2L3Q86XJ1 694 aa8.76□□□□□ -1.01
CLSTN1-204ENST00000464286 FBXO41Q8TF61 875 aa8.76□□□□□ -1.01
CLSTN1-204ENST00000464286 HLA-CQ95604 372 aa8.76□□□□□ -1.01
CLSTN1-204ENST00000464286 PRDM9Q9NQV7 894 aa8.76□□□□□ -1.01
CLSTN1-204ENST00000464286 MROH1Q8NDA8 1641 aa8.76□□□□□ -1.01
CLSTN1-204ENST00000464286 ARHGEF28Q8N1W1 1705 aaKnown RBP8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 GLI2P10070 1586 aa8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 HECW2Q9P2P5 1572 aa8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 UQCRHLA0A096LP55 91 aa8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 U2SURPO15042 1029 aaKnown RBP8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 KIF3BO15066 747 aa8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 EPB41L2O43491 1005 aaKnown RBP8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 PTMAP06454 111 aaKnown RBP8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 UQCRHP07919 91 aa8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 RIPK4P57078 832 aa8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 USP46P62068 366 aa8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 UTP14CQ5TAP6 766 aaKnown RBP8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 ZNF697Q5TEC3 545 aa8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 TRAF7Q6Q0C0 670 aa8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 LRSAM1Q6UWE0 723 aa8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 HDGFL2Q7Z4V5 671 aaPredicted RBP8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 PLEKHF1Q96S99 279 aa8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 FCF1Q9Y324 198 aaKnown RBP8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 COL3A1P02461 1466 aaPredicted RBP8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 CLTCQ00610 1675 aaKnown RBP8.75□□□□□ -1.01
CLSTN1-204ENST00000464286 HOXA2O43364 376 aa8.74□□□□□ -1.01
CLSTN1-204ENST00000464286 HMMRO75330 724 aa8.74□□□□□ -1.01
CLSTN1-204ENST00000464286 CYP2E1P05181 493 aaPredicted RBP8.74□□□□□ -1.01
CLSTN1-204ENST00000464286 PDIA4P13667 645 aaKnown RBP8.74□□□□□ -1.01
CLSTN1-204ENST00000464286 SSFA2P28290 1259 aa8.74□□□□□ -1.01
CLSTN1-204ENST00000464286 CHAF1AQ13111 956 aaPredicted RBP8.74□□□□□ -1.01
CLSTN1-204ENST00000464286 Q3C1V9 767 aa8.74□□□□□ -1.01
CLSTN1-204ENST00000464286 MCTP1Q6DN14 999 aa8.74□□□□□ -1.01
CLSTN1-204ENST00000464286 RPAP2Q8IXW5 612 aaPredicted RBP8.74□□□□□ -1.01
CLSTN1-204ENST00000464286 SLC12A5Q9H2X9 1139 aa8.74□□□□□ -1.01
CLSTN1-204ENST00000464286 IFT57Q9NWB7 429 aa8.74□□□□□ -1.01
CLSTN1-204ENST00000464286 R3HCC1Q9Y3T6 440 aaKnown RBP8.74□□□□□ -1.01
CLSTN1-204ENST00000464286 KIF20BQ96Q89 1820 aa8.74□□□□□ -1.01
CLSTN1-204ENST00000464286 ZBTB7BO15156 539 aaPredicted RBP8.73□□□□□ -1.01
CLSTN1-204ENST00000464286 GDF9O60383 454 aa8.73□□□□□ -1.01
CLSTN1-204ENST00000464286 SSTR3P32745 418 aaPredicted RBP8.73□□□□□ -1.01
CLSTN1-204ENST00000464286 TAF3Q5VWG9 929 aa8.73□□□□□ -1.01
CLSTN1-204ENST00000464286 CAVIN1Q6NZI2 390 aaKnown RBP8.73□□□□□ -1.01
CLSTN1-204ENST00000464286 GAS2L2Q8NHY3 880 aa8.73□□□□□ -1.01
CLSTN1-204ENST00000464286 KIF2CQ99661 725 aa8.73□□□□□ -1.01
CLSTN1-204ENST00000464286 GTPBP4Q9BZE4 634 aaKnown RBP8.73□□□□□ -1.01
CLSTN1-204ENST00000464286 TSPY26PQ9H489 355 aa8.73□□□□□ -1.01
CLSTN1-204ENST00000464286 LMBRD1Q9NUN5 540 aa8.73□□□□□ -1.01
CLSTN1-204ENST00000464286 ABCC4O15439 1325 aa8.73□□□□□ -1.01
CLSTN1-204ENST00000464286 PNPLA6Q8IY17 1366 aa8.73□□□□□ -1.01
CLSTN1-204ENST00000464286 RPIAP49247 311 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 ANAPC15P60006 121 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 PRR20EP86478 221 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 PRR20CP86479 221 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 PRR20DP86480 221 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 PRR20BP86481 221 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 PRR20AP86496 221 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 GUCA2AQ02747 115 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 AMHR2Q16671 573 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 TTC22Q5TAA0 569 aa8.72□□□□□ -1.01
CLSTN1-204ENST00000464286 TSR2Q969E8 191 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms