RNA–Protein interactions for RNA: ENST00000463277.5

SFXN5-208, Transcript of sideroflexin 5, human

TSL 4

Gene SFXN5, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFXN5-208	ENST00000463277	NEURL1B	A8MQ27	555 aa		13.5	□□□□□ -0.25
SFXN5-208	ENST00000463277	TRIM28	Q13263	835 aa	Known RBP	13.5	□□□□□ -0.25
SFXN5-208	ENST00000463277	POLA2	Q14181	598 aa		13.5	□□□□□ -0.25
SFXN5-208	ENST00000463277	BRWD3	Q6RI45	1802 aa		13.5	□□□□□ -0.25
SFXN5-208	ENST00000463277	GRM8	O00222	908 aa		13.49	□□□□□ -0.25
SFXN5-208	ENST00000463277	IL6ST	P40189	918 aa	Predicted RBP	13.49	□□□□□ -0.25
SFXN5-208	ENST00000463277	AIMP1	Q12904	312 aa	Known RBP	13.49	□□□□□ -0.25
SFXN5-208	ENST00000463277	CHD1L	Q86WJ1	897 aa		13.49	□□□□□ -0.25
SFXN5-208	ENST00000463277	LRRFIP2	Q9Y608	721 aa	Known RBP	13.49	□□□□□ -0.25
SFXN5-208	ENST00000463277	TAF1L	Q8IZX4	1826 aa		13.48	□□□□□ -0.25
SFXN5-208	ENST00000463277	PALLD	Q8WX93	1383 aa		13.48	□□□□□ -0.25
SFXN5-208	ENST00000463277	LOC102724428	A0A0B4J2F2	783 aa		13.48	□□□□□ -0.25
SFXN5-208	ENST00000463277	RGL2	O15211	777 aa		13.48	□□□□□ -0.25
SFXN5-208	ENST00000463277	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.48	□□□□□ -0.25
SFXN5-208	ENST00000463277	SIK1	P57059	783 aa		13.48	□□□□□ -0.25
SFXN5-208	ENST00000463277	GCKR	Q14397	625 aa		13.48	□□□□□ -0.25
SFXN5-208	ENST00000463277	RBM42	Q9BTD8	480 aa	Known RBP	13.48	□□□□□ -0.25
SFXN5-208	ENST00000463277	BACH2	Q9BYV9	841 aa		13.48	□□□□□ -0.25
SFXN5-208	ENST00000463277	QTRT2	Q9H974	415 aa	Known RBP	13.48	□□□□□ -0.25
SFXN5-208	ENST00000463277	PDE4A	P27815	886 aa		13.47	□□□□□ -0.25
SFXN5-208	ENST00000463277	TTLL7	Q6ZT98	887 aa		13.47	□□□□□ -0.25
SFXN5-208	ENST00000463277	CCDC191	Q8NCU4	936 aa		13.47	□□□□□ -0.25
SFXN5-208	ENST00000463277	SYTL4	Q96C24	671 aa	Predicted RBP	13.47	□□□□□ -0.25
SFXN5-208	ENST00000463277	ISCA1	Q9BUE6	129 aa		13.47	□□□□□ -0.25
SFXN5-208	ENST00000463277	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.47	□□□□□ -0.25
SFXN5-208	ENST00000463277	BCOR	Q6W2J9	1755 aa		13.46	□□□□□ -0.25
SFXN5-208	ENST00000463277	ERVV-1	B6SEH8	477 aa		13.46	□□□□□ -0.25
SFXN5-208	ENST00000463277	EIF5	P55010	431 aa	Known RBP	13.46	□□□□□ -0.25
SFXN5-208	ENST00000463277	CASP7	P55210	303 aa		13.46	□□□□□ -0.25
SFXN5-208	ENST00000463277	CWF19L2	Q2TBE0	894 aa	Known RBP	13.46	□□□□□ -0.25
SFXN5-208	ENST00000463277	ZNF772	Q68DY9	489 aa	Predicted RBP	13.46	□□□□□ -0.25
SFXN5-208	ENST00000463277	ACSBG1	Q96GR2	724 aa		13.46	□□□□□ -0.25
SFXN5-208	ENST00000463277	MYD88	Q99836	296 aa		13.46	□□□□□ -0.25
SFXN5-208	ENST00000463277	NOP58	Q9Y2X3	529 aa	Known RBP	13.46	□□□□□ -0.25
SFXN5-208	ENST00000463277	MAP3K15	Q6ZN16	1313 aa		13.45	□□□□□ -0.26
SFXN5-208	ENST00000463277	PNMA6E	A0A0J9YXQ4	647 aa		13.45	□□□□□ -0.26
SFXN5-208	ENST00000463277		H7C1W4	665 aa		13.45	□□□□□ -0.26
SFXN5-208	ENST00000463277	KCNQ2	O43526	872 aa		13.45	□□□□□ -0.26
SFXN5-208	ENST00000463277	RAB11FIP3	O75154	756 aa		13.45	□□□□□ -0.26
SFXN5-208	ENST00000463277	TCIRG1	Q13488	830 aa		13.45	□□□□□ -0.26
SFXN5-208	ENST00000463277	FAM161A	Q3B820	660 aa		13.45	□□□□□ -0.26
SFXN5-208	ENST00000463277	HSP90AB3P	Q58FF7	597 aa		13.45	□□□□□ -0.26
SFXN5-208	ENST00000463277	ANKRD45	Q5TZF3	282 aa		13.45	□□□□□ -0.26
SFXN5-208	ENST00000463277	SKAP1	Q86WV1	359 aa		13.45	□□□□□ -0.26
SFXN5-208	ENST00000463277	SEPT12	Q8IYM1	358 aa		13.45	□□□□□ -0.26
SFXN5-208	ENST00000463277	TUBGCP6	Q96RT7	1819 aa		13.44	□□□□□ -0.26
SFXN5-208	ENST00000463277	PIP4K2A	P48426	406 aa	Predicted RBP	13.44	□□□□□ -0.26
SFXN5-208	ENST00000463277	RGS3	P49796	1198 aa		13.44	□□□□□ -0.26
SFXN5-208	ENST00000463277	RABL6	Q3YEC7	729 aa	Predicted RBP	13.44	□□□□□ -0.26
SFXN5-208	ENST00000463277	HSP90AB4P	Q58FF6	505 aa		13.44	□□□□□ -0.26
SFXN5-208	ENST00000463277	RC3H1	Q5TC82	1133 aa	Known RBP	13.44	□□□□□ -0.26
SFXN5-208	ENST00000463277	INTS5	Q6P9B9	1019 aa	Known RBP	13.44	□□□□□ -0.26
SFXN5-208	ENST00000463277	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.44	□□□□□ -0.26
SFXN5-208	ENST00000463277	PPP1R42	Q7Z4L9	355 aa		13.44	□□□□□ -0.26
SFXN5-208	ENST00000463277	KAZALD1	Q96I82	304 aa		13.44	□□□□□ -0.26
SFXN5-208	ENST00000463277	CCDC87	Q9NVE4	849 aa		13.44	□□□□□ -0.26
SFXN5-208	ENST00000463277	ZBTB1	Q9Y2K1	713 aa		13.44	□□□□□ -0.26
SFXN5-208	ENST00000463277	CNTNAP4	Q9C0A0	1308 aa		13.43	□□□□□ -0.26
SFXN5-208	ENST00000463277	MYH3	P11055	1940 aa		13.43	□□□□□ -0.26
SFXN5-208	ENST00000463277	ATP6V1A	P38606	617 aa		13.43	□□□□□ -0.26
SFXN5-208	ENST00000463277	RBM6	P78332	1123 aa	Known RBP	13.43	□□□□□ -0.26
SFXN5-208	ENST00000463277	ITPK1	Q13572	414 aa		13.43	□□□□□ -0.26
SFXN5-208	ENST00000463277	C8orf34	Q49A92	452 aa		13.43	□□□□□ -0.26
SFXN5-208	ENST00000463277	KIF6	Q6ZMV9	814 aa		13.43	□□□□□ -0.26
SFXN5-208	ENST00000463277	SUCLG2	Q96I99	432 aa		13.43	□□□□□ -0.26
SFXN5-208	ENST00000463277	CWC25	Q9NXE8	425 aa	Predicted RBP	13.43	□□□□□ -0.26
SFXN5-208	ENST00000463277	HMGB2	P26583	209 aa	Known RBP	13.42	□□□□□ -0.26
SFXN5-208	ENST00000463277	LNPK	Q9C0E8	428 aa		13.42	□□□□□ -0.26
SFXN5-208	ENST00000463277	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.42	□□□□□ -0.26
SFXN5-208	ENST00000463277	OSBPL3	Q9H4L5	887 aa		13.42	□□□□□ -0.26
SFXN5-208	ENST00000463277	RBM19	Q9Y4C8	960 aa	Known RBP	13.42	□□□□□ -0.26
SFXN5-208	ENST00000463277	CRKL	P46109	303 aa	Known RBP	13.41	□□□□□ -0.26
SFXN5-208	ENST00000463277	BMP2KL	Q5H9B9	411 aa		13.41	□□□□□ -0.26
SFXN5-208	ENST00000463277	FAM196A	Q6ZSG2	479 aa		13.41	□□□□□ -0.26
SFXN5-208	ENST00000463277	FBXO41	Q8TF61	875 aa		13.41	□□□□□ -0.26
SFXN5-208	ENST00000463277	PLA2G12B	Q9BX93	195 aa		13.41	□□□□□ -0.26
SFXN5-208	ENST00000463277	SCN7A	Q01118	1682 aa		13.4	□□□□□ -0.26
SFXN5-208	ENST00000463277	SALL3	Q9BXA9	1300 aa		13.4	□□□□□ -0.26
SFXN5-208	ENST00000463277		A0A087WZG4	1122 aa		13.4	□□□□□ -0.26
SFXN5-208	ENST00000463277		A0A0G2JS52	829 aa		13.4	□□□□□ -0.26
SFXN5-208	ENST00000463277	SRGAP3	O43295	1099 aa		13.4	□□□□□ -0.26
SFXN5-208	ENST00000463277	MYT1	Q01538	1121 aa		13.4	□□□□□ -0.26
SFXN5-208	ENST00000463277	LRRCC1	Q9C099	1032 aa		13.4	□□□□□ -0.26
SFXN5-208	ENST00000463277	LAMB2	P55268	1798 aa		13.4	□□□□□ -0.26
SFXN5-208	ENST00000463277	CDHR2	Q9BYE9	1310 aa		13.39	□□□□□ -0.27
SFXN5-208	ENST00000463277	ATP5J2-PTCD1	G3V325	749 aa		13.39	□□□□□ -0.27
SFXN5-208	ENST00000463277	PCCA	P05165	728 aa	Predicted RBP	13.39	□□□□□ -0.27
SFXN5-208	ENST00000463277	PLEKHM2	Q8IWE5	1019 aa		13.39	□□□□□ -0.27
SFXN5-208	ENST00000463277	KIF1BP	Q96EK5	621 aa		13.39	□□□□□ -0.27
SFXN5-208	ENST00000463277	ZBTB3	Q9H5J0	574 aa		13.39	□□□□□ -0.27
SFXN5-208	ENST00000463277	BICC1	Q9H694	974 aa	Known RBP	13.39	□□□□□ -0.27
SFXN5-208	ENST00000463277	COPRS	Q9NQ92	184 aa		13.39	□□□□□ -0.27
SFXN5-208	ENST00000463277	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.39	□□□□□ -0.27
SFXN5-208	ENST00000463277	AOX1	Q06278	1338 aa		13.39	□□□□□ -0.27
SFXN5-208	ENST00000463277	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.38	□□□□□ -0.27
SFXN5-208	ENST00000463277	RGPD4	Q7Z3J3	1758 aa		13.38	□□□□□ -0.27
SFXN5-208	ENST00000463277	CLEC4G	Q6UXB4	293 aa		13.38	□□□□□ -0.27
SFXN5-208	ENST00000463277	KRT27	Q7Z3Y8	459 aa		13.38	□□□□□ -0.27
SFXN5-208	ENST00000463277	DZIP3	Q86Y13	1208 aa	Known RBP	13.38	□□□□□ -0.27
SFXN5-208	ENST00000463277	ERC1	Q8IUD2	1116 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms