RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 GNAT3A8MTJ3 354 aa10.65□□□□□ -0.7
CDC42BPA-210ENST00000462553 POTECB2RU33 542 aa10.65□□□□□ -0.7
CDC42BPA-210ENST00000462553 STARD3NLO95772 234 aa10.65□□□□□ -0.7
CDC42BPA-210ENST00000462553 CNGB1Q14028 1251 aaPredicted RBP10.65□□□□□ -0.7
CDC42BPA-210ENST00000462553 BICDL1Q6ZP65 573 aa10.65□□□□□ -0.7
CDC42BPA-210ENST00000462553 TTC5Q8N0Z6 440 aa10.65□□□□□ -0.7
CDC42BPA-210ENST00000462553 SMC1BQ8NDV3 1235 aa10.65□□□□□ -0.7
CDC42BPA-210ENST00000462553 GAS2L2Q8NHY3 880 aa10.65□□□□□ -0.7
CDC42BPA-210ENST00000462553 A0A087WZG4 1122 aa10.64□□□□□ -0.71
CDC42BPA-210ENST00000462553 H0YIN7 160 aa10.64□□□□□ -0.71
CDC42BPA-210ENST00000462553 KCNQ3O43525 872 aa10.64□□□□□ -0.71
CDC42BPA-210ENST00000462553 CAMTA2O94983 1202 aa10.64□□□□□ -0.71
CDC42BPA-210ENST00000462553 IL6STP40189 918 aaPredicted RBP10.64□□□□□ -0.71
CDC42BPA-210ENST00000462553 TEFQ10587 303 aa10.64□□□□□ -0.71
CDC42BPA-210ENST00000462553 CCDC24Q8N4L8 307 aa10.64□□□□□ -0.71
CDC42BPA-210ENST00000462553 PHACTR3Q96KR7 559 aa10.64□□□□□ -0.71
CDC42BPA-210ENST00000462553 RSPH6AQ9H0K4 717 aa10.64□□□□□ -0.71
CDC42BPA-210ENST00000462553 TBC1D2BQ9UPU7 963 aa10.64□□□□□ -0.71
CDC42BPA-210ENST00000462553 ADAMTSL1Q8N6G6 1762 aa10.64□□□□□ -0.71
CDC42BPA-210ENST00000462553 U2SURPO15042 1029 aaKnown RBP10.63□□□□□ -0.71
CDC42BPA-210ENST00000462553 A1BGP04217 495 aa10.63□□□□□ -0.71
CDC42BPA-210ENST00000462553 ZEB1P37275 1124 aaPredicted RBP10.63□□□□□ -0.71
CDC42BPA-210ENST00000462553 BRIP1Q9BX63 1249 aa10.63□□□□□ -0.71
CDC42BPA-210ENST00000462553 LTBP3Q9NS15 1303 aa10.62□□□□□ -0.71
CDC42BPA-210ENST00000462553 PRAMEF22A3QJZ6 481 aa10.62□□□□□ -0.71
CDC42BPA-210ENST00000462553 C21orf2O43822 256 aa10.62□□□□□ -0.71
CDC42BPA-210ENST00000462553 VEGFAP15692 232 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPA-210ENST00000462553 COL13A1Q5TAT6 717 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPA-210ENST00000462553 FMNL2Q96PY5 1086 aa10.62□□□□□ -0.71
CDC42BPA-210ENST00000462553 TEX13AQ9BXU3 409 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPA-210ENST00000462553 ZNF330Q9Y3S2 320 aaPredicted RBP10.62□□□□□ -0.71
CDC42BPA-210ENST00000462553 PPP2R1AP30153 589 aa10.61□□□□□ -0.71
CDC42BPA-210ENST00000462553 PRKAR2BP31323 418 aa10.61□□□□□ -0.71
CDC42BPA-210ENST00000462553 PDE6BP35913 854 aa10.61□□□□□ -0.71
CDC42BPA-210ENST00000462553 PIP4K2AP48426 406 aaPredicted RBP10.61□□□□□ -0.71
CDC42BPA-210ENST00000462553 CNBD1Q8NA66 436 aa10.61□□□□□ -0.71
CDC42BPA-210ENST00000462553 ZNF622Q969S3 477 aaKnown RBP eCLIP10.61□□□□□ -0.718e-8■■□□□ 14
CDC42BPA-210ENST00000462553 PDZRN3Q9UPQ7 1066 aa10.61□□□□□ -0.71
CDC42BPA-210ENST00000462553 SNED1Q8TER0 1413 aa10.6□□□□□ -0.71
CDC42BPA-210ENST00000462553 SPDYE2BA6NHP3 402 aa10.6□□□□□ -0.71
CDC42BPA-210ENST00000462553 BTBD11A6QL63 1104 aa10.6□□□□□ -0.71
CDC42BPA-210ENST00000462553 SPDYE6P0CI01 402 aa10.6□□□□□ -0.71
CDC42BPA-210ENST00000462553 SRGNP10124 158 aa10.6□□□□□ -0.71
CDC42BPA-210ENST00000462553 SPDYE2Q495Y8 402 aa10.6□□□□□ -0.71
CDC42BPA-210ENST00000462553 PRPF40BQ6NWY9 871 aaKnown RBP10.6□□□□□ -0.71
CDC42BPA-210ENST00000462553 USP16Q9Y5T5 823 aa10.6□□□□□ -0.71
CDC42BPA-210ENST00000462553 DDX10Q13206 875 aaKnown RBP10.59□□□□□ -0.71
CDC42BPA-210ENST00000462553 STYK1Q6J9G0 422 aa10.59□□□□□ -0.71
CDC42BPA-210ENST00000462553 DZIP3Q86Y13 1208 aaKnown RBP10.59□□□□□ -0.71
CDC42BPA-210ENST00000462553 SETDB2Q96T68 719 aa10.59□□□□□ -0.71
CDC42BPA-210ENST00000462553 TAOK3Q9H2K8 898 aa10.59□□□□□ -0.71
CDC42BPA-210ENST00000462553 LTBP1Q14766 1721 aa10.58□□□□□ -0.72
CDC42BPA-210ENST00000462553 LAMB2P55268 1798 aa10.58□□□□□ -0.72
CDC42BPA-210ENST00000462553 ANKRD36CQ5JPF3 1778 aa10.58□□□□□ -0.72
CDC42BPA-210ENST00000462553 COL4A5P29400 1685 aa10.58□□□□□ -0.72
CDC42BPA-210ENST00000462553 NBPF26B4DH59 902 aa10.58□□□□□ -0.72
CDC42BPA-210ENST00000462553 POTEIP0CG38 1075 aa10.58□□□□□ -0.72
CDC42BPA-210ENST00000462553 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
CDC42BPA-210ENST00000462553 ERFEQ4G0M1 354 aa10.58□□□□□ -0.72
CDC42BPA-210ENST00000462553 NBPF10Q6P3W6 841 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-210ENST00000462553 MCM10Q7L590 875 aa10.58□□□□□ -0.72
CDC42BPA-210ENST00000462553 NBPF15Q8N660 670 aa10.58□□□□□ -0.72
CDC42BPA-210ENST00000462553 C7orf43Q8WVR3 580 aa10.58□□□□□ -0.72
CDC42BPA-210ENST00000462553 KLRG2A4D1S0 409 aaPredicted RBP10.57□□□□□ -0.72
CDC42BPA-210ENST00000462553 ST5P78524 1137 aa10.57□□□□□ -0.72
CDC42BPA-210ENST00000462553 CNKSR1Q969H4 720 aa10.57□□□□□ -0.72
CDC42BPA-210ENST00000462553 MASTLQ96GX5 879 aa10.57□□□□□ -0.72
CDC42BPA-210ENST00000462553 ABCC12Q96J65 1359 aa10.56□□□□□ -0.72
CDC42BPA-210ENST00000462553 DDNO94850 711 aaPredicted RBP10.56□□□□□ -0.72
CDC42BPA-210ENST00000462553 HSPA1AP0DMV8 641 aaKnown RBP10.56□□□□□ -0.72
CDC42BPA-210ENST00000462553 HSPA1BP0DMV9 641 aaKnown RBP10.56□□□□□ -0.72
CDC42BPA-210ENST00000462553 DCTN1Q14203 1278 aa10.56□□□□□ -0.72
CDC42BPA-210ENST00000462553 OLFM4Q6UX06 510 aa10.56□□□□□ -0.72
CDC42BPA-210ENST00000462553 CLEC4GQ6UXB4 293 aa10.56□□□□□ -0.72
CDC42BPA-210ENST00000462553 CFAP53Q96M91 514 aa10.56□□□□□ -0.72
CDC42BPA-210ENST00000462553 ZNF541Q9H0D2 1346 aa10.56□□□□□ -0.72
CDC42BPA-210ENST00000462553 TRPM7Q96QT4 1865 aa10.55□□□□□ -0.72
CDC42BPA-210ENST00000462553 THSD7BQ9C0I4 1608 aa10.55□□□□□ -0.72
CDC42BPA-210ENST00000462553 RGL2O15211 777 aa10.55□□□□□ -0.72
CDC42BPA-210ENST00000462553 SNRPA1P09661 255 aaKnown RBP10.55□□□□□ -0.72
CDC42BPA-210ENST00000462553 SOGA3Q5TF21 947 aa10.55□□□□□ -0.72
CDC42BPA-210ENST00000462553 CHADLQ6NUI6 762 aa10.55□□□□□ -0.72
CDC42BPA-210ENST00000462553 DPY19L2Q6NUT2 758 aa10.55□□□□□ -0.72
CDC42BPA-210ENST00000462553 NBPF5PQ86XG9 351 aaPredicted RBP10.55□□□□□ -0.72
CDC42BPA-210ENST00000462553 L3MBTL3Q96JM7 780 aaPredicted RBP10.55□□□□□ -0.72
CDC42BPA-210ENST00000462553 PASKQ96RG2 1323 aa10.55□□□□□ -0.72
CDC42BPA-210ENST00000462553 NPHP1O15259 732 aa10.54□□□□□ -0.72
CDC42BPA-210ENST00000462553 U2AF1L5P0DN76 240 aaPredicted RBP10.54□□□□□ -0.72
CDC42BPA-210ENST00000462553 NPR1P16066 1061 aa10.54□□□□□ -0.72
CDC42BPA-210ENST00000462553 U2AF1Q01081 240 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDC42BPA-210ENST00000462553 HLFQ16534 295 aa10.54□□□□□ -0.72
CDC42BPA-210ENST00000462553 RIC1Q4ADV7 1423 aa10.54□□□□□ -0.72
CDC42BPA-210ENST00000462553 CCDC93Q567U6 631 aa10.54□□□□□ -0.72
CDC42BPA-210ENST00000462553 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
CDC42BPA-210ENST00000462553 NIP7Q9Y221 180 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDC42BPA-210ENST00000462553 ZNF652Q9Y2D9 606 aa10.54□□□□□ -0.72
CDC42BPA-210ENST00000462553 CNTNAP1P78357 1384 aa10.53□□□□□ -0.72
CDC42BPA-210ENST00000462553 FKBP4Q02790 459 aaKnown RBP eCLIP10.53□□□□□ -0.72
CDC42BPA-210ENST00000462553 RALBP1Q15311 655 aa10.53□□□□□ -0.72
CDC42BPA-210ENST00000462553 NPM2Q86SE8 214 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms