RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 FAM196AQ6ZSG2 479 aa17.63■□□□□ 0.41
GTF3C5-208ENST00000461871 COL15A1P39059 1388 aa17.63■□□□□ 0.41
GTF3C5-208ENST00000461871 SIRT2Q8IXJ6 389 aa17.62■□□□□ 0.41
GTF3C5-208ENST00000461871 C9orf78Q9NZ63 289 aaPredicted RBP17.62■□□□□ 0.41
GTF3C5-208ENST00000461871 ERVV-1B6SEH8 477 aa17.61■□□□□ 0.41
GTF3C5-208ENST00000461871 GRM8O00222 908 aa17.61■□□□□ 0.41
GTF3C5-208ENST00000461871 NUCB1Q02818 461 aa17.61■□□□□ 0.41
GTF3C5-208ENST00000461871 MTX1Q13505 466 aa17.61■□□□□ 0.41
GTF3C5-208ENST00000461871 NPM2Q86SE8 214 aaKnown RBP17.61■□□□□ 0.41
GTF3C5-208ENST00000461871 ACSBG1Q96GR2 724 aa17.61■□□□□ 0.41
GTF3C5-208ENST00000461871 SLC4A9Q96Q91 983 aa17.61■□□□□ 0.41
GTF3C5-208ENST00000461871 PALLDQ8WX93 1383 aa17.61■□□□□ 0.41
GTF3C5-208ENST00000461871 NEURL1BA8MQ27 555 aa17.6■□□□□ 0.41
GTF3C5-208ENST00000461871 HSP90AB3PQ58FF7 597 aa17.6■□□□□ 0.41
GTF3C5-208ENST00000461871 RC3H1Q5TC82 1133 aaKnown RBP17.6■□□□□ 0.41
GTF3C5-208ENST00000461871 CCDC191Q8NCU4 936 aa17.6■□□□□ 0.41
GTF3C5-208ENST00000461871 BCL11BQ9C0K0 894 aaPredicted RBP17.6■□□□□ 0.41
GTF3C5-208ENST00000461871 ATP6V1AP38606 617 aa17.59■□□□□ 0.41
GTF3C5-208ENST00000461871 GCKRQ14397 625 aa17.59■□□□□ 0.41
GTF3C5-208ENST00000461871 KIF6Q6ZMV9 814 aa17.59■□□□□ 0.41
GTF3C5-208ENST00000461871 PDZRN3Q9UPQ7 1066 aa17.59■□□□□ 0.41
GTF3C5-208ENST00000461871 KCNQ2O43526 872 aa17.58■□□□□ 0.4
GTF3C5-208ENST00000461871 IGKV5-2P06315 115 aa17.58■□□□□ 0.4
GTF3C5-208ENST00000461871 KRT27Q7Z3Y8 459 aa17.58■□□□□ 0.4
GTF3C5-208ENST00000461871 SSH3Q8TE77 659 aa17.58■□□□□ 0.4
GTF3C5-208ENST00000461871 CCDC87Q9NVE4 849 aa17.58■□□□□ 0.4
GTF3C5-208ENST00000461871 NHSQ6T4R5 1651 aa17.58■□□□□ 0.4
GTF3C5-208ENST00000461871 A0A087WZG4 1122 aa17.57■□□□□ 0.4
GTF3C5-208ENST00000461871 EIF5P55010 431 aaKnown RBP17.57■□□□□ 0.4
GTF3C5-208ENST00000461871 TCIRG1Q13488 830 aa17.57■□□□□ 0.4
GTF3C5-208ENST00000461871 HSP90AB4PQ58FF6 505 aa17.57■□□□□ 0.4
GTF3C5-208ENST00000461871 LRRFIP2Q9Y608 721 aaKnown RBP17.57■□□□□ 0.4
GTF3C5-208ENST00000461871 MAP3K15Q6ZN16 1313 aa17.56■□□□□ 0.4
GTF3C5-208ENST00000461871 NBPF7P0C2Y1 421 aaPredicted RBP17.56■□□□□ 0.4
GTF3C5-208ENST00000461871 POLA2Q14181 598 aa17.56■□□□□ 0.4
GTF3C5-208ENST00000461871 GIGYF2Q6Y7W6 1299 aaKnown RBP17.56■□□□□ 0.4
GTF3C5-208ENST00000461871 CHD1LQ86WJ1 897 aa17.56■□□□□ 0.4
GTF3C5-208ENST00000461871 MYD88Q99836 296 aa17.56■□□□□ 0.4
GTF3C5-208ENST00000461871 C1orf115Q9H7X2 142 aa17.56■□□□□ 0.4
GTF3C5-208ENST00000461871 ZBTB47Q9UFB7 747 aaPredicted RBP17.56■□□□□ 0.4
GTF3C5-208ENST00000461871 H7C1W4 665 aa17.55■□□□□ 0.4
GTF3C5-208ENST00000461871 RAB11FIP3O75154 756 aa17.55■□□□□ 0.4
GTF3C5-208ENST00000461871 INTS5Q6P9B9 1019 aaKnown RBP17.55■□□□□ 0.4
GTF3C5-208ENST00000461871 TTLL7Q6ZT98 887 aa17.55■□□□□ 0.4
GTF3C5-208ENST00000461871 ISCA1Q9BUE6 129 aa17.55■□□□□ 0.4
GTF3C5-208ENST00000461871 CWC25Q9NXE8 425 aaPredicted RBP17.55■□□□□ 0.4
GTF3C5-208ENST00000461871 TJP1Q07157 1748 aa17.55■□□□□ 0.4
GTF3C5-208ENST00000461871 RREB1Q92766 1687 aa17.55■□□□□ 0.4
GTF3C5-208ENST00000461871 CNTNAP4Q9C0A0 1308 aa17.54■□□□□ 0.4
GTF3C5-208ENST00000461871 RXRBP28702 533 aa17.54■□□□□ 0.4
GTF3C5-208ENST00000461871 CRKLP46109 303 aaKnown RBP17.54■□□□□ 0.4
GTF3C5-208ENST00000461871 CWF19L2Q2TBE0 894 aaKnown RBP17.54■□□□□ 0.4
GTF3C5-208ENST00000461871 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
GTF3C5-208ENST00000461871 SBF2Q86WG5 1849 aa17.53■□□□□ 0.4
GTF3C5-208ENST00000461871 ITPK1Q13572 414 aa17.52■□□□□ 0.4
GTF3C5-208ENST00000461871 ANKRD45Q5TZF3 282 aa17.52■□□□□ 0.4
GTF3C5-208ENST00000461871 CLEC4GQ6UXB4 293 aa17.52■□□□□ 0.4
GTF3C5-208ENST00000461871 ZBTB1Q9Y2K1 713 aa17.52■□□□□ 0.4
GTF3C5-208ENST00000461871 NOP58Q9Y2X3 529 aaKnown RBP17.52■□□□□ 0.4
GTF3C5-208ENST00000461871 HSP90B1P14625 803 aaKnown RBP17.51■□□□□ 0.39
GTF3C5-208ENST00000461871 PIP4K2AP48426 406 aaPredicted RBP17.51■□□□□ 0.39
GTF3C5-208ENST00000461871 RABL6Q3YEC7 729 aaPredicted RBP17.51■□□□□ 0.39
GTF3C5-208ENST00000461871 SLC27A3Q5K4L6 730 aa17.51■□□□□ 0.39
GTF3C5-208ENST00000461871 NUP188Q5SRE5 1749 aa17.51■□□□□ 0.39
GTF3C5-208ENST00000461871 PPP1R42Q7Z4L9 355 aa17.51■□□□□ 0.39
GTF3C5-208ENST00000461871 BTAF1O14981 1849 aa17.5■□□□□ 0.39
GTF3C5-208ENST00000461871 CASP7P55210 303 aa17.5■□□□□ 0.39
GTF3C5-208ENST00000461871 DZIP3Q86Y13 1208 aaKnown RBP17.5■□□□□ 0.39
GTF3C5-208ENST00000461871 AK7Q96M32 723 aa17.5■□□□□ 0.39
GTF3C5-208ENST00000461871 PNMA6EA0A0J9YXQ4 647 aa17.49■□□□□ 0.39
GTF3C5-208ENST00000461871 SRGAP3O43295 1099 aa17.49■□□□□ 0.39
GTF3C5-208ENST00000461871 RPS6KA4O75676 772 aa17.49■□□□□ 0.39
GTF3C5-208ENST00000461871 PCCAP05165 728 aaPredicted RBP17.49■□□□□ 0.39
GTF3C5-208ENST00000461871 ERC1Q8IUD2 1116 aa17.49■□□□□ 0.39
GTF3C5-208ENST00000461871 PLA2G12BQ9BX93 195 aa17.49■□□□□ 0.39
GTF3C5-208ENST00000461871 ZBTB3Q9H5J0 574 aa17.49■□□□□ 0.39
GTF3C5-208ENST00000461871 ZNF652Q9Y2D9 606 aa17.49■□□□□ 0.39
GTF3C5-208ENST00000461871 COL5A3P25940 1745 aaPredicted RBP17.49■□□□□ 0.39
GTF3C5-208ENST00000461871 EIF5BO60841 1220 aaKnown RBP17.48■□□□□ 0.39
GTF3C5-208ENST00000461871 PARP10Q53GL7 1025 aa17.48■□□□□ 0.39
GTF3C5-208ENST00000461871 LY75O60449 1722 aa17.47■□□□□ 0.39
GTF3C5-208ENST00000461871 RGS3P49796 1198 aa17.47■□□□□ 0.39
GTF3C5-208ENST00000461871 ZNF34Q8IZ26 560 aa17.47■□□□□ 0.39
GTF3C5-208ENST00000461871 ZBTB38Q8NAP3 1195 aaPredicted RBP17.47■□□□□ 0.39
GTF3C5-208ENST00000461871 KAZALD1Q96I82 304 aa17.47■□□□□ 0.39
GTF3C5-208ENST00000461871 SUCLG2Q96I99 432 aa17.47■□□□□ 0.39
GTF3C5-208ENST00000461871 LRRCC1Q9C099 1032 aa17.47■□□□□ 0.39
GTF3C5-208ENST00000461871 TSHZ2Q9NRE2 1034 aa17.47■□□□□ 0.39
GTF3C5-208ENST00000461871 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
GTF3C5-208ENST00000461871 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
GTF3C5-208ENST00000461871 ATP5J2-PTCD1G3V325 749 aa17.46■□□□□ 0.39
GTF3C5-208ENST00000461871 PLSCR1O15162 318 aa17.46■□□□□ 0.39
GTF3C5-208ENST00000461871 FAM161AQ3B820 660 aa17.46■□□□□ 0.39
GTF3C5-208ENST00000461871 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.39
GTF3C5-208ENST00000461871 KIF1BPQ96EK5 621 aa17.46■□□□□ 0.39
GTF3C5-208ENST00000461871 BACH2Q9BYV9 841 aa17.46■□□□□ 0.39
GTF3C5-208ENST00000461871 FBXO3Q9UK99 471 aa17.46■□□□□ 0.39
GTF3C5-208ENST00000461871 AFDNP55196 1824 aaKnown RBP17.45■□□□□ 0.38
GTF3C5-208ENST00000461871 ADRA2BP18089 450 aa17.45■□□□□ 0.38
GTF3C5-208ENST00000461871 PDE4AP27815 886 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms