RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 NOS2P35228 1153 aa9.86□□□□□ -0.83
CFHR3-204ENST00000461558 ELOA3CA0A087WX78 387 aaPredicted RBP9.85□□□□□ -0.83
CFHR3-204ENST00000461558 ELOA3DA6NLF2 546 aaPredicted RBP9.85□□□□□ -0.83
CFHR3-204ENST00000461558 EML1O00423 815 aa9.85□□□□□ -0.83
CFHR3-204ENST00000461558 ALAS2P22557 587 aa9.85□□□□□ -0.83
CFHR3-204ENST00000461558 ELOA3BQ3SY89 546 aa9.85□□□□□ -0.83
CFHR3-204ENST00000461558 LRRC69Q6ZNQ3 347 aa9.85□□□□□ -0.83
CFHR3-204ENST00000461558 SLC9A9Q8IVB4 645 aa9.85□□□□□ -0.83
CFHR3-204ENST00000461558 DEPDC4Q8N2C3 294 aa9.85□□□□□ -0.83
CFHR3-204ENST00000461558 ELOA3Q8NG57 546 aa9.85□□□□□ -0.83
CFHR3-204ENST00000461558 APBA3O96018 575 aa9.84□□□□□ -0.83
CFHR3-204ENST00000461558 NKAPLQ5M9Q1 402 aa9.84□□□□□ -0.83
CFHR3-204ENST00000461558 TBCELQ5QJ74 424 aa9.84□□□□□ -0.83
CFHR3-204ENST00000461558 SYT9Q86SS6 491 aa9.84□□□□□ -0.83
CFHR3-204ENST00000461558 WWC1Q8IX03 1113 aa9.84□□□□□ -0.83
CFHR3-204ENST00000461558 MDFIQ99750 246 aa9.84□□□□□ -0.83
CFHR3-204ENST00000461558 TPSG1Q9NRR2 321 aa9.84□□□□□ -0.83
CFHR3-204ENST00000461558 GPC6Q9Y625 555 aaPredicted RBP9.84□□□□□ -0.83
CFHR3-204ENST00000461558 TNS4Q8IZW8 715 aa9.83□□□□□ -0.84
CFHR3-204ENST00000461558 ZNF232Q9UNY5 417 aa9.83□□□□□ -0.84
CFHR3-204ENST00000461558 C7orf43Q8WVR3 580 aa9.82□□□□□ -0.84
CFHR3-204ENST00000461558 POM121Q96HA1 1249 aa9.82□□□□□ -0.84
CFHR3-204ENST00000461558 SERTM1A2A2V5 107 aa9.81□□□□□ -0.84
CFHR3-204ENST00000461558 SIN3BO75182 1162 aa9.81□□□□□ -0.84
CFHR3-204ENST00000461558 FOXD4L6Q3SYB3 417 aaPredicted RBP9.81□□□□□ -0.84
CFHR3-204ENST00000461558 SH3PXD2AQ5TCZ1 1133 aa9.81□□□□□ -0.84
CFHR3-204ENST00000461558 FOXD4L3Q6VB84 417 aaPredicted RBP9.81□□□□□ -0.84
CFHR3-204ENST00000461558 TRIM50Q86XT4 487 aa9.81□□□□□ -0.84
CFHR3-204ENST00000461558 KRTAP4-12Q9BQ66 201 aa9.81□□□□□ -0.84
CFHR3-204ENST00000461558 NEUROD4Q9HD90 331 aa9.81□□□□□ -0.84
CFHR3-204ENST00000461558 DYRK3O43781 588 aa9.8□□□□□ -0.84
CFHR3-204ENST00000461558 LCE3BQ5TA77 95 aa9.8□□□□□ -0.84
CFHR3-204ENST00000461558 KIAA1024Q9UPX6 916 aa9.8□□□□□ -0.84
CFHR3-204ENST00000461558 ADARB2-AS1A8MUL3 147 aa9.79□□□□□ -0.84
CFHR3-204ENST00000461558 SFSWAPQ12872 951 aaKnown RBP9.79□□□□□ -0.84
CFHR3-204ENST00000461558 TPCN2Q8NHX9 752 aa9.79□□□□□ -0.84
CFHR3-204ENST00000461558 RHPN1Q8TCX5 695 aa9.79□□□□□ -0.84
CFHR3-204ENST00000461558 NACC1Q96RE7 527 aa9.79□□□□□ -0.84
CFHR3-204ENST00000461558 ZFP64Q9NPA5 681 aa9.79□□□□□ -0.84
CFHR3-204ENST00000461558 ARTNQ5T4W7 220 aa9.78□□□□□ -0.84
CFHR3-204ENST00000461558 PLEKHM2Q8IWE5 1019 aa9.78□□□□□ -0.84
CFHR3-204ENST00000461558 SLC30A3Q99726 388 aa9.78□□□□□ -0.84
CFHR3-204ENST00000461558 FAM229AH3BQW9 127 aa9.77□□□□□ -0.85
CFHR3-204ENST00000461558 M0R082 166 aa9.77□□□□□ -0.85
CFHR3-204ENST00000461558 ZBTB7BO15156 539 aaPredicted RBP9.77□□□□□ -0.85
CFHR3-204ENST00000461558 ATP1A2P50993 1020 aa9.77□□□□□ -0.85
CFHR3-204ENST00000461558 PSMA6P60900 246 aaKnown RBP9.77□□□□□ -0.85
CFHR3-204ENST00000461558 CLDN10P78369 228 aa9.77□□□□□ -0.85
CFHR3-204ENST00000461558 CCDC102BQ68D86 513 aa9.77□□□□□ -0.85
CFHR3-204ENST00000461558 ZNF417Q8TAU3 575 aa9.77□□□□□ -0.85
CFHR3-204ENST00000461558 ADAMTS19Q8TE59 1207 aa9.77□□□□□ -0.85
CFHR3-204ENST00000461558 TNFRSF25Q93038 417 aa9.77□□□□□ -0.85
CFHR3-204ENST00000461558 ZNF587Q96SQ5 575 aaPredicted RBP9.77□□□□□ -0.85
CFHR3-204ENST00000461558 USP17L3A6NCW0 530 aa9.76□□□□□ -0.85
CFHR3-204ENST00000461558 USP17L4A6NCW7 530 aa9.76□□□□□ -0.85
CFHR3-204ENST00000461558 POM121CA8CG34 1229 aa9.76□□□□□ -0.85
CFHR3-204ENST00000461558 RAD21O60216 631 aa9.76□□□□□ -0.85
CFHR3-204ENST00000461558 SPEM2Q0P670 501 aa9.76□□□□□ -0.85
CFHR3-204ENST00000461558 TRIM28Q13263 835 aaKnown RBP9.76□□□□□ -0.85
CFHR3-204ENST00000461558 C1orf53Q5VUE5 145 aa9.76□□□□□ -0.85
CFHR3-204ENST00000461558 USP17L2Q6R6M4 530 aa9.76□□□□□ -0.85
CFHR3-204ENST00000461558 USP17L1Q7RTZ2 530 aa9.76□□□□□ -0.85
CFHR3-204ENST00000461558 TSPAN10Q9H1Z9 355 aaPredicted RBP9.76□□□□□ -0.85
CFHR3-204ENST00000461558 HIRAP54198 1017 aaPredicted RBP9.75□□□□□ -0.85
CFHR3-204ENST00000461558 POTEAQ6S8J7 498 aa9.75□□□□□ -0.85
CFHR3-204ENST00000461558 NBPF11Q86T75 865 aa9.75□□□□□ -0.85
CFHR3-204ENST00000461558 UCN2Q96RP3 112 aa9.75□□□□□ -0.85
CFHR3-204ENST00000461558 PRDM6Q9NQX0 595 aa9.75□□□□□ -0.85
CFHR3-204ENST00000461558 NEUROD1Q13562 356 aa9.74□□□□□ -0.85
CFHR3-204ENST00000461558 COL9A3Q14050 684 aaPredicted RBP9.74□□□□□ -0.85
CFHR3-204ENST00000461558 PRSS36Q5K4E3 855 aa9.74□□□□□ -0.85
CFHR3-204ENST00000461558 HSH2DQ96JZ2 352 aa9.74□□□□□ -0.85
CFHR3-204ENST00000461558 CEP63Q96MT8 703 aa9.74□□□□□ -0.85
CFHR3-204ENST00000461558 BRD7Q9NPI1 651 aa9.74□□□□□ -0.85
CFHR3-204ENST00000461558 CHMP3Q9Y3E7 222 aa9.74□□□□□ -0.85
CFHR3-204ENST00000461558 STARD13Q9Y3M8 1113 aa9.74□□□□□ -0.85
CFHR3-204ENST00000461558 M0R2N6 131 aa9.73□□□□□ -0.85
CFHR3-204ENST00000461558 ALBP02768 609 aa9.73□□□□□ -0.85
CFHR3-204ENST00000461558 ADH7P40394 386 aa9.73□□□□□ -0.85
CFHR3-204ENST00000461558 RAB44Q7Z6P3 723 aaPredicted RBP9.73□□□□□ -0.85
CFHR3-204ENST00000461558 PHACTR1Q9C0D0 580 aa9.73□□□□□ -0.85
CFHR3-204ENST00000461558 ANKIB1Q9P2G1 1089 aa9.73□□□□□ -0.85
CFHR3-204ENST00000461558 HCN4Q9Y3Q4 1203 aa9.73□□□□□ -0.85
CFHR3-204ENST00000461558 KCNQ4P56696 695 aa9.72□□□□□ -0.85
CFHR3-204ENST00000461558 TYRO3Q06418 890 aa9.72□□□□□ -0.85
CFHR3-204ENST00000461558 MICALL1Q8N3F8 863 aa9.72□□□□□ -0.85
CFHR3-204ENST00000461558 LARGE2Q8N3Y3 721 aa9.72□□□□□ -0.85
CFHR3-204ENST00000461558 OGFOD1Q8N543 542 aa9.72□□□□□ -0.85
CFHR3-204ENST00000461558 PALM3A6NDB9 673 aaPredicted RBP9.71□□□□□ -0.86
CFHR3-204ENST00000461558 ATP9BO43861 1147 aa9.71□□□□□ -0.86
CFHR3-204ENST00000461558 UBTFP17480 764 aaKnown RBP9.71□□□□□ -0.86
CFHR3-204ENST00000461558 GRIK4Q16099 956 aa9.71□□□□□ -0.86
CFHR3-204ENST00000461558 C8orf86Q6ZUL3 223 aa9.71□□□□□ -0.86
CFHR3-204ENST00000461558 SFI1A8K8P3 1242 aa9.7□□□□□ -0.86
CFHR3-204ENST00000461558 HDGFL1Q5TGJ6 251 aa9.7□□□□□ -0.86
CFHR3-204ENST00000461558 SIX5Q8N196 739 aa9.7□□□□□ -0.86
CFHR3-204ENST00000461558 TSEN2Q8NCE0 465 aaKnown RBP9.7□□□□□ -0.86
CFHR3-204ENST00000461558 ZNF280CQ8ND82 737 aa9.7□□□□□ -0.86
CFHR3-204ENST00000461558 SUSD3Q96L08 255 aa9.7□□□□□ -0.86
CFHR3-204ENST00000461558 KCNH4Q9UQ05 1017 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms