RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 IL6STP40189 918 aaPredicted RBP23.34■■□□□ 1.33
TOP3A-202ENST00000461127 MTHFSDQ2M296 383 aaKnown RBP23.34■■□□□ 1.33
TOP3A-202ENST00000461127 CLEC11AQ9Y240 323 aa23.34■■□□□ 1.33
TOP3A-202ENST00000461127 CACNA1SQ13698 1873 aa23.34■■□□□ 1.33
TOP3A-202ENST00000461127 ITGBL1O95965 494 aaPredicted RBP23.33■■□□□ 1.33
TOP3A-202ENST00000461127 HACL1Q9UJ83 578 aa23.33■■□□□ 1.33
TOP3A-202ENST00000461127 CCDC93Q567U6 631 aa23.32■■□□□ 1.32
TOP3A-202ENST00000461127 CCER1Q8TC90 406 aaPredicted RBP23.32■■□□□ 1.32
TOP3A-202ENST00000461127 HEG1Q9ULI3 1381 aa23.31■■□□□ 1.32
TOP3A-202ENST00000461127 EIF4G2P78344 907 aaKnown RBP eCLIP23.31■■□□□ 1.32
TOP3A-202ENST00000461127 TEFQ10587 303 aa23.31■■□□□ 1.32
TOP3A-202ENST00000461127 ABHD8Q96I13 439 aa23.31■■□□□ 1.32
TOP3A-202ENST00000461127 ZNF496Q96IT1 587 aaPredicted RBP23.31■■□□□ 1.32
TOP3A-202ENST00000461127 ARFGEF2Q9Y6D5 1785 aa23.31■■□□□ 1.32
TOP3A-202ENST00000461127 MAP2K1Q02750 393 aaPredicted RBP23.3■■□□□ 1.32
TOP3A-202ENST00000461127 DEFB115Q30KQ5 88 aa23.3■■□□□ 1.32
TOP3A-202ENST00000461127 PNMA8AQ86V59 439 aaPredicted RBP23.3■■□□□ 1.32
TOP3A-202ENST00000461127 RASSF10A6NK89 507 aa23.29■■□□□ 1.32
TOP3A-202ENST00000461127 EPHX2P34913 555 aa23.29■■□□□ 1.32
TOP3A-202ENST00000461127 ZNF790Q6PG37 636 aa23.29■■□□□ 1.32
TOP3A-202ENST00000461127 CAMTA2O94983 1202 aa23.28■■□□□ 1.32
TOP3A-202ENST00000461127 HSPA8P11142 646 aaKnown RBP23.28■■□□□ 1.32
TOP3A-202ENST00000461127 FAM161AQ3B820 660 aa23.28■■□□□ 1.32
TOP3A-202ENST00000461127 FKBP4Q02790 459 aaKnown RBP eCLIP23.27■■□□□ 1.32
TOP3A-202ENST00000461127 FMNL2Q96PY5 1086 aa23.27■■□□□ 1.32
TOP3A-202ENST00000461127 NPR1P16066 1061 aa23.26■■□□□ 1.31
TOP3A-202ENST00000461127 NBPF5PQ86XG9 351 aaPredicted RBP23.26■■□□□ 1.31
TOP3A-202ENST00000461127 CNTROBQ8N137 903 aa23.26■■□□□ 1.31
TOP3A-202ENST00000461127 C7orf43Q8WVR3 580 aa23.26■■□□□ 1.31
TOP3A-202ENST00000461127 WDR33Q9C0J8 1336 aaKnown RBP23.26■■□□□ 1.31
TOP3A-202ENST00000461127 ZNF541Q9H0D2 1346 aa23.26■■□□□ 1.31
TOP3A-202ENST00000461127 DIAPH1O60610 1272 aaKnown RBP23.25■■□□□ 1.31
TOP3A-202ENST00000461127 A1BGP04217 495 aa23.25■■□□□ 1.31
TOP3A-202ENST00000461127 HSPA5P11021 654 aaKnown RBP23.25■■□□□ 1.31
TOP3A-202ENST00000461127 DZIP3Q86Y13 1208 aaKnown RBP23.25■■□□□ 1.31
TOP3A-202ENST00000461127 RTKN2Q8IZC4 609 aa23.25■■□□□ 1.31
TOP3A-202ENST00000461127 ZNF277Q9NRM2 450 aaPredicted RBP23.25■■□□□ 1.31
TOP3A-202ENST00000461127 ABT1Q9ULW3 272 aaKnown RBP23.25■■□□□ 1.31
TOP3A-202ENST00000461127 MAP1SQ66K74 1059 aaPredicted RBP23.24■■□□□ 1.31
TOP3A-202ENST00000461127 ZNF652Q9Y2D9 606 aa23.24■■□□□ 1.31
TOP3A-202ENST00000461127 GNAT3A8MTJ3 354 aa23.23■■□□□ 1.31
TOP3A-202ENST00000461127 BEGAINQ9BUH8 593 aa23.23■■□□□ 1.31
TOP3A-202ENST00000461127 RNF123Q5XPI4 1314 aa23.23■■□□□ 1.31
TOP3A-202ENST00000461127 CLEC4GQ6UXB4 293 aa23.22■■□□□ 1.31
TOP3A-202ENST00000461127 GAS2L2Q8NHY3 880 aa23.22■■□□□ 1.31
TOP3A-202ENST00000461127 ADAMTSL1Q8N6G6 1762 aa23.22■■□□□ 1.31
TOP3A-202ENST00000461127 MLLT1Q03111 559 aaPredicted RBP23.21■■□□□ 1.31
TOP3A-202ENST00000461127 BCORQ6W2J9 1755 aa23.21■■□□□ 1.31
TOP3A-202ENST00000461127 IARSP41252 1262 aaKnown RBP23.2■■□□□ 1.3
TOP3A-202ENST00000461127 AMER1Q5JTC6 1135 aaPredicted RBP23.2■■□□□ 1.3
TOP3A-202ENST00000461127 TPTE2Q6XPS3 522 aa23.2■■□□□ 1.3
TOP3A-202ENST00000461127 GPC2Q8N158 579 aa23.2■■□□□ 1.3
TOP3A-202ENST00000461127 IL17REQ8NFR9 667 aa23.2■■□□□ 1.3
TOP3A-202ENST00000461127 CCDC85CA6NKD9 419 aa23.19■■□□□ 1.3
TOP3A-202ENST00000461127 FZD9O00144 591 aa23.19■■□□□ 1.3
TOP3A-202ENST00000461127 ECE1P42892 770 aa23.19■■□□□ 1.3
TOP3A-202ENST00000461127 JDP2Q8WYK2 163 aa23.19■■□□□ 1.3
TOP3A-202ENST00000461127 KLRG2A4D1S0 409 aaPredicted RBP23.18■■□□□ 1.3
TOP3A-202ENST00000461127 ALDH1B1P30837 517 aa23.18■■□□□ 1.3
TOP3A-202ENST00000461127 PAXIP1Q6ZW49 1069 aaPredicted RBP23.18■■□□□ 1.3
TOP3A-202ENST00000461127 DDX21Q9NR30 783 aaKnown RBP eCLIP23.18■■□□□ 1.3
TOP3A-202ENST00000461127 SIPA1L3O60292 1781 aaPredicted RBP23.17■■□□□ 1.3
TOP3A-202ENST00000461127 LMOD1P29536 600 aaPredicted RBP23.17■■□□□ 1.3
TOP3A-202ENST00000461127 SYNE4Q8N205 404 aa23.17■■□□□ 1.3
TOP3A-202ENST00000461127 BTBD11A6QL63 1104 aa23.16■■□□□ 1.3
TOP3A-202ENST00000461127 OLFM4Q6UX06 510 aa23.16■■□□□ 1.3
TOP3A-202ENST00000461127 CAPNS2Q96L46 248 aa23.16■■□□□ 1.3
TOP3A-202ENST00000461127 EIF6P56537 245 aaKnown RBP23.15■■□□□ 1.3
TOP3A-202ENST00000461127 NIP7Q9Y221 180 aaKnown RBP eCLIP23.15■■□□□ 1.3
TOP3A-202ENST00000461127 U2SURPO15042 1029 aaKnown RBP23.14■■□□□ 1.29
TOP3A-202ENST00000461127 GTF2E1P29083 439 aaPredicted RBP23.14■■□□□ 1.29
TOP3A-202ENST00000461127 GPR101Q96P66 508 aaPredicted RBP23.14■■□□□ 1.29
TOP3A-202ENST00000461127 PCDH10Q9P2E7 1040 aa23.14■■□□□ 1.29
TOP3A-202ENST00000461127 GJA3Q9Y6H8 435 aa23.14■■□□□ 1.29
TOP3A-202ENST00000461127 CLSPNQ9HAW4 1339 aa23.13■■□□□ 1.29
TOP3A-202ENST00000461127 PIP4K2AP48426 406 aaPredicted RBP23.13■■□□□ 1.29
TOP3A-202ENST00000461127 RGS19P49795 217 aa23.13■■□□□ 1.29
TOP3A-202ENST00000461127 GRM1Q13255 1194 aa23.13■■□□□ 1.29
TOP3A-202ENST00000461127 PSMD1Q99460 953 aa23.13■■□□□ 1.29
TOP3A-202ENST00000461127 USP16Q9Y5T5 823 aa23.13■■□□□ 1.29
TOP3A-202ENST00000461127 RGL2O15211 777 aa23.12■■□□□ 1.29
TOP3A-202ENST00000461127 CEMIPQ8WUJ3 1361 aa23.12■■□□□ 1.29
TOP3A-202ENST00000461127 FAM177BA6PVY3 158 aa23.11■■□□□ 1.29
TOP3A-202ENST00000461127 KCNQ3O43525 872 aa23.11■■□□□ 1.29
TOP3A-202ENST00000461127 CC2D2BQ6DHV5 1058 aa23.11■■□□□ 1.29
TOP3A-202ENST00000461127 THSD7BQ9C0I4 1608 aa23.11■■□□□ 1.29
TOP3A-202ENST00000461127 SNRPA1P09661 255 aaKnown RBP23.1■■□□□ 1.29
TOP3A-202ENST00000461127 CYP4F22Q6NT55 531 aa23.1■■□□□ 1.29
TOP3A-202ENST00000461127 GRIPAP1Q4V328 841 aa23.08■■□□□ 1.29
TOP3A-202ENST00000461127 CC2D1BQ5T0F9 858 aaKnown RBP23.08■■□□□ 1.29
TOP3A-202ENST00000461127 USP50Q70EL3 339 aaPredicted RBP23.08■■□□□ 1.29
TOP3A-202ENST00000461127 MAP2K2P36507 400 aa23.07■■□□□ 1.28
TOP3A-202ENST00000461127 CFAP44Q96MT7 982 aa23.07■■□□□ 1.28
TOP3A-202ENST00000461127 TRPM7Q96QT4 1865 aa23.07■■□□□ 1.28
TOP3A-202ENST00000461127 CA12O43570 354 aa23.06■■□□□ 1.28
TOP3A-202ENST00000461127 EPS15P42566 896 aa23.06■■□□□ 1.28
TOP3A-202ENST00000461127 LARGE2Q8N3Y3 721 aa23.06■■□□□ 1.28
TOP3A-202ENST00000461127 NYXQ9GZU5 481 aa23.06■■□□□ 1.28
TOP3A-202ENST00000461127 TLL2Q9Y6L7 1015 aa23.06■■□□□ 1.28
TOP3A-202ENST00000461127 PRAMEF22A3QJZ6 481 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms