RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 PNMA6EA0A0J9YXQ4 647 aa13.5□□□□□ -0.25
IFT88-204ENST00000461115 USP16Q9Y5T5 823 aa13.5□□□□□ -0.25
IFT88-204ENST00000461115 LRRFIP2Q9Y608 721 aaKnown RBP13.5□□□□□ -0.25
IFT88-204ENST00000461115 ANXA1P04083 346 aa13.49□□□□□ -0.25
IFT88-204ENST00000461115 RASEFQ8IZ41 740 aa13.49□□□□□ -0.25
IFT88-204ENST00000461115 CDCA7Q9BWT1 371 aaPredicted RBP13.49□□□□□ -0.25
IFT88-204ENST00000461115 MAP3K2Q9Y2U5 619 aa13.49□□□□□ -0.25
IFT88-204ENST00000461115 SLIT2O94813 1529 aa13.49□□□□□ -0.25
IFT88-204ENST00000461115 EIF5BO60841 1220 aaKnown RBP13.48□□□□□ -0.25
IFT88-204ENST00000461115 RAB11FIP3O75154 756 aa13.48□□□□□ -0.25
IFT88-204ENST00000461115 NBPF7P0C2Y1 421 aaPredicted RBP13.48□□□□□ -0.25
IFT88-204ENST00000461115 TTC22Q5TAA0 569 aa13.48□□□□□ -0.25
IFT88-204ENST00000461115 NPM2Q86SE8 214 aaKnown RBP13.48□□□□□ -0.25
IFT88-204ENST00000461115 VSIG10Q8N0Z9 540 aa13.48□□□□□ -0.25
IFT88-204ENST00000461115 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
IFT88-204ENST00000461115 STRN4Q9NRL3 753 aa13.48□□□□□ -0.25
IFT88-204ENST00000461115 CICQ96RK0 1608 aaPredicted RBP13.48□□□□□ -0.25
IFT88-204ENST00000461115 AFDNP55196 1824 aaKnown RBP13.48□□□□□ -0.25
IFT88-204ENST00000461115 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
IFT88-204ENST00000461115 METTL22Q9BUU2 404 aaPredicted RBP13.47□□□□□ -0.25
IFT88-204ENST00000461115 UPF2Q9HAU5 1272 aaKnown RBP13.47□□□□□ -0.25
IFT88-204ENST00000461115 STAP2Q9UGK3 403 aa13.47□□□□□ -0.25
IFT88-204ENST00000461115 THRAP3Q9Y2W1 955 aaKnown RBP13.47□□□□□ -0.25
IFT88-204ENST00000461115 TOM1O60784 492 aa13.47□□□□□ -0.25
IFT88-204ENST00000461115 GSPT1P15170 499 aaKnown RBP13.47□□□□□ -0.25
IFT88-204ENST00000461115 RBM25P49756 843 aaKnown RBP13.47□□□□□ -0.25
IFT88-204ENST00000461115 PPP1R42Q7Z4L9 355 aa13.47□□□□□ -0.25
IFT88-204ENST00000461115 LRRCC1Q9C099 1032 aa13.47□□□□□ -0.25
IFT88-204ENST00000461115 AOX1Q06278 1338 aa13.47□□□□□ -0.25
IFT88-204ENST00000461115 IGKV5-2P06315 115 aa13.46□□□□□ -0.26
IFT88-204ENST00000461115 XAGE3Q8WTP9 111 aa13.46□□□□□ -0.26
IFT88-204ENST00000461115 ANP32EQ9BTT0 268 aa13.46□□□□□ -0.26
IFT88-204ENST00000461115 BCL9O00512 1426 aa13.45□□□□□ -0.26
IFT88-204ENST00000461115 GRM8O00222 908 aa13.45□□□□□ -0.26
IFT88-204ENST00000461115 ANKRD13DQ6ZTN6 518 aa13.45□□□□□ -0.26
IFT88-204ENST00000461115 COPS6Q7L5N1 327 aa13.45□□□□□ -0.26
IFT88-204ENST00000461115 C16orf71Q8IYS4 520 aaPredicted RBP13.45□□□□□ -0.26
IFT88-204ENST00000461115 KAZALD1Q96I82 304 aa13.45□□□□□ -0.26
IFT88-204ENST00000461115 SPATA31A1Q5TZJ5 1347 aa13.44□□□□□ -0.26
IFT88-204ENST00000461115 NEURL1BA8MQ27 555 aa13.44□□□□□ -0.26
IFT88-204ENST00000461115 NBPF26B4DH59 902 aa13.44□□□□□ -0.26
IFT88-204ENST00000461115 CDC45O75419 566 aa13.44□□□□□ -0.26
IFT88-204ENST00000461115 VASPP50552 380 aaPredicted RBP13.44□□□□□ -0.26
IFT88-204ENST00000461115 PDE1AP54750 535 aa13.44□□□□□ -0.26
IFT88-204ENST00000461115 HSP90AB4PQ58FF6 505 aa13.44□□□□□ -0.26
IFT88-204ENST00000461115 NBPF14Q5TI25 921 aa13.44□□□□□ -0.26
IFT88-204ENST00000461115 NBPF10Q6P3W6 841 aaKnown RBP13.44□□□□□ -0.26
IFT88-204ENST00000461115 NBPF15Q8N660 670 aa13.44□□□□□ -0.26
IFT88-204ENST00000461115 PLBD2Q8NHP8 589 aa13.44□□□□□ -0.26
IFT88-204ENST00000461115 FAM212AQ96EL1 285 aa13.44□□□□□ -0.26
IFT88-204ENST00000461115 TEX13AQ9BXU3 409 aaPredicted RBP13.44□□□□□ -0.26
IFT88-204ENST00000461115 TJP1Q07157 1748 aa13.43□□□□□ -0.26
IFT88-204ENST00000461115 USP42Q9H9J4 1324 aaKnown RBP13.43□□□□□ -0.26
IFT88-204ENST00000461115 GCKRQ14397 625 aa13.43□□□□□ -0.26
IFT88-204ENST00000461115 TBC1D9Q6ZT07 1266 aa13.43□□□□□ -0.26
IFT88-204ENST00000461115 DDX54Q8TDD1 881 aaKnown RBP13.43□□□□□ -0.26
IFT88-204ENST00000461115 OTUD7AQ8TE49 926 aaPredicted RBP13.43□□□□□ -0.26
IFT88-204ENST00000461115 EXOC6BQ9Y2D4 811 aa13.43□□□□□ -0.26
IFT88-204ENST00000461115 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.42□□□□□ -0.26
IFT88-204ENST00000461115 SRGAP3O43295 1099 aa13.42□□□□□ -0.26
IFT88-204ENST00000461115 SMARCA5O60264 1052 aaPredicted RBP13.42□□□□□ -0.26
IFT88-204ENST00000461115 NUBP1P53384 320 aa13.42□□□□□ -0.26
IFT88-204ENST00000461115 NEXNQ0ZGT2 675 aa13.42□□□□□ -0.26
IFT88-204ENST00000461115 CWF19L2Q2TBE0 894 aaKnown RBP13.42□□□□□ -0.26
IFT88-204ENST00000461115 LHX8Q68G74 356 aa13.42□□□□□ -0.26
IFT88-204ENST00000461115 BARGINQ6ZT62 677 aa13.42□□□□□ -0.26
IFT88-204ENST00000461115 RIC3Q7Z5B4 369 aa13.42□□□□□ -0.26
IFT88-204ENST00000461115 MS4A3Q96HJ5 214 aa13.42□□□□□ -0.26
IFT88-204ENST00000461115 C22orf23Q9BZE7 217 aa13.42□□□□□ -0.26
IFT88-204ENST00000461115 TMOD3Q9NYL9 352 aa13.42□□□□□ -0.26
IFT88-204ENST00000461115 C9orf78Q9NZ63 289 aaPredicted RBP13.42□□□□□ -0.26
IFT88-204ENST00000461115 DOT1LQ8TEK3 1739 aa13.42□□□□□ -0.26
IFT88-204ENST00000461115 ZNF831Q5JPB2 1677 aa13.42□□□□□ -0.26
IFT88-204ENST00000461115 SPATA31A5Q5VU36 1347 aa13.41□□□□□ -0.26
IFT88-204ENST00000461115 SPATA31A7Q8IWB4 1347 aa13.41□□□□□ -0.26
IFT88-204ENST00000461115 RABL6Q3YEC7 729 aaPredicted RBP13.41□□□□□ -0.26
IFT88-204ENST00000461115 RHPN1Q8TCX5 695 aa13.41□□□□□ -0.26
IFT88-204ENST00000461115 PIGBQ92521 554 aa13.41□□□□□ -0.26
IFT88-204ENST00000461115 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
IFT88-204ENST00000461115 AK9Q5TCS8 1911 aa13.41□□□□□ -0.26
IFT88-204ENST00000461115 RREB1Q92766 1687 aa13.4□□□□□ -0.26
IFT88-204ENST00000461115 EXOC5O00471 708 aa13.4□□□□□ -0.26
IFT88-204ENST00000461115 MYL6BP14649 208 aa13.4□□□□□ -0.26
IFT88-204ENST00000461115 SDSP20132 328 aa13.4□□□□□ -0.26
IFT88-204ENST00000461115 CASP7P55210 303 aa13.4□□□□□ -0.26
IFT88-204ENST00000461115 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
IFT88-204ENST00000461115 KIF12Q96FN5 646 aa13.4□□□□□ -0.26
IFT88-204ENST00000461115 ATG3Q9NT62 314 aa13.4□□□□□ -0.26
IFT88-204ENST00000461115 MX1P20591 662 aa13.39□□□□□ -0.27
IFT88-204ENST00000461115 SUCLG2Q96I99 432 aa13.39□□□□□ -0.27
IFT88-204ENST00000461115 ANKRD36CQ5JPF3 1778 aa13.39□□□□□ -0.27
IFT88-204ENST00000461115 SURF6O75683 361 aaKnown RBP13.39□□□□□ -0.27
IFT88-204ENST00000461115 AIMP1Q12904 312 aaKnown RBP13.39□□□□□ -0.27
IFT88-204ENST00000461115 TRIM28Q13263 835 aaKnown RBP13.39□□□□□ -0.27
IFT88-204ENST00000461115 ERC1Q8IUD2 1116 aa13.39□□□□□ -0.27
IFT88-204ENST00000461115 JCADQ9P266 1359 aa13.38□□□□□ -0.27
IFT88-204ENST00000461115 KAT6BQ8WYB5 2073 aa13.38□□□□□ -0.27
IFT88-204ENST00000461115 H7C1W4 665 aa13.38□□□□□ -0.27
IFT88-204ENST00000461115 EPB41L2O43491 1005 aaKnown RBP13.38□□□□□ -0.27
IFT88-204ENST00000461115 MFAP1P55081 439 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms