RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TMEM51Q9NW97 253 aa12.88□□□□□ -0.35
HERC4-207ENST00000460168 ITGB4P16144 1822 aa12.87□□□□□ -0.35
HERC4-207ENST00000460168 LAMB4A4D0S4 1761 aa12.87□□□□□ -0.35
HERC4-207ENST00000460168 N4BP2Q86UW6 1770 aaPredicted RBP12.87□□□□□ -0.35
HERC4-207ENST00000460168 PDIA6Q15084 440 aa12.87□□□□□ -0.35
HERC4-207ENST00000460168 FAM98CQ17RN3 349 aaKnown RBP12.87□□□□□ -0.35
HERC4-207ENST00000460168 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
HERC4-207ENST00000460168 KCPQ6ZWJ8 1503 aa12.87□□□□□ -0.35
HERC4-207ENST00000460168 GLI3P10071 1580 aa12.87□□□□□ -0.35
HERC4-207ENST00000460168 A0A0G2JS52 829 aa12.86□□□□□ -0.35
HERC4-207ENST00000460168 ADCY9O60503 1353 aa12.86□□□□□ -0.35
HERC4-207ENST00000460168 GNAI3P08754 354 aa12.86□□□□□ -0.35
HERC4-207ENST00000460168 PIP4K2AP48426 406 aaPredicted RBP12.86□□□□□ -0.35
HERC4-207ENST00000460168 MMP14P50281 582 aa12.86□□□□□ -0.35
HERC4-207ENST00000460168 KSR2Q6VAB6 950 aa12.86□□□□□ -0.35
HERC4-207ENST00000460168 SMC5Q8IY18 1101 aa12.86□□□□□ -0.35
HERC4-207ENST00000460168 ASAP1Q9ULH1 1129 aa12.86□□□□□ -0.35
HERC4-207ENST00000460168 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
HERC4-207ENST00000460168 MAP3K2Q9Y2U5 619 aa12.86□□□□□ -0.35
HERC4-207ENST00000460168 BCL9O00512 1426 aa12.85□□□□□ -0.35
HERC4-207ENST00000460168 SIRT2Q8IXJ6 389 aa12.85□□□□□ -0.35
HERC4-207ENST00000460168 DOT1LQ8TEK3 1739 aa12.85□□□□□ -0.35
HERC4-207ENST00000460168 GNAI2P04899 355 aa12.85□□□□□ -0.35
HERC4-207ENST00000460168 PTMAP06454 111 aaKnown RBP12.85□□□□□ -0.35
HERC4-207ENST00000460168 RPAP2Q8IXW5 612 aaPredicted RBP12.85□□□□□ -0.35
HERC4-207ENST00000460168 ZNF592Q92610 1267 aa12.85□□□□□ -0.35
HERC4-207ENST00000460168 ATP10DQ9P241 1426 aa12.84□□□□□ -0.35
HERC4-207ENST00000460168 CLGNO14967 610 aa12.84□□□□□ -0.35
HERC4-207ENST00000460168 PRIM1P49642 420 aaKnown RBP12.84□□□□□ -0.35
HERC4-207ENST00000460168 BEND3Q5T5X7 828 aa12.84□□□□□ -0.35
HERC4-207ENST00000460168 CEP85Q6P2H3 762 aa12.84□□□□□ -0.35
HERC4-207ENST00000460168 COPS6Q7L5N1 327 aa12.84□□□□□ -0.35
HERC4-207ENST00000460168 RIC3Q7Z5B4 369 aa12.84□□□□□ -0.35
HERC4-207ENST00000460168 ANKRD44Q8N8A2 993 aa12.84□□□□□ -0.35
HERC4-207ENST00000460168 MARCH10Q8NA82 808 aaPredicted RBP12.84□□□□□ -0.35
HERC4-207ENST00000460168 XAGE3Q8WTP9 111 aa12.84□□□□□ -0.35
HERC4-207ENST00000460168 GCC1Q96CN9 775 aa12.84□□□□□ -0.35
HERC4-207ENST00000460168 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
HERC4-207ENST00000460168 ATG3Q9NT62 314 aa12.84□□□□□ -0.35
HERC4-207ENST00000460168 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.84□□□□□ -0.35
HERC4-207ENST00000460168 UBTFL1P0CB47 393 aaPredicted RBP12.84□□□□□ -0.35
HERC4-207ENST00000460168 ERBB4Q15303 1308 aa12.83□□□□□ -0.36
HERC4-207ENST00000460168 PLCD3Q8N3E9 789 aa12.83□□□□□ -0.36
HERC4-207ENST00000460168 ACSBG1Q96GR2 724 aa12.83□□□□□ -0.36
HERC4-207ENST00000460168 USP44Q9H0E7 712 aa12.83□□□□□ -0.36
HERC4-207ENST00000460168 AFF2P51816 1311 aa12.82□□□□□ -0.36
HERC4-207ENST00000460168 HMMRO75330 724 aa12.82□□□□□ -0.36
HERC4-207ENST00000460168 MCCP23508 829 aa12.82□□□□□ -0.36
HERC4-207ENST00000460168 NEXNQ0ZGT2 675 aa12.82□□□□□ -0.36
HERC4-207ENST00000460168 ANKRD13DQ6ZTN6 518 aa12.82□□□□□ -0.36
HERC4-207ENST00000460168 LRP10Q7Z4F1 713 aa12.82□□□□□ -0.36
HERC4-207ENST00000460168 TEX13AQ9BXU3 409 aaPredicted RBP12.82□□□□□ -0.36
HERC4-207ENST00000460168 A1BGP04217 495 aa12.81□□□□□ -0.36
HERC4-207ENST00000460168 PLCD4Q9BRC7 762 aa12.81□□□□□ -0.36
HERC4-207ENST00000460168 LRRFIP2Q9Y608 721 aaKnown RBP12.81□□□□□ -0.36
HERC4-207ENST00000460168 ALDH1L1O75891 902 aa12.81□□□□□ -0.36
HERC4-207ENST00000460168 FAM193AP78312 1265 aa12.81□□□□□ -0.36
HERC4-207ENST00000460168 NUCB1Q02818 461 aa12.81□□□□□ -0.36
HERC4-207ENST00000460168 CWF19L2Q2TBE0 894 aaKnown RBP12.81□□□□□ -0.36
HERC4-207ENST00000460168 ANKRD45Q5TZF3 282 aa12.81□□□□□ -0.36
HERC4-207ENST00000460168 LINS1Q8NG48 757 aa12.81□□□□□ -0.36
HERC4-207ENST00000460168 C9orf78Q9NZ63 289 aaPredicted RBP12.81□□□□□ -0.36
HERC4-207ENST00000460168 NBPF26B4DH59 902 aa12.8□□□□□ -0.36
HERC4-207ENST00000460168 STARD3NLO95772 234 aa12.8□□□□□ -0.36
HERC4-207ENST00000460168 NBPF7P0C2Y1 421 aaPredicted RBP12.8□□□□□ -0.36
HERC4-207ENST00000460168 NBPF14Q5TI25 921 aa12.8□□□□□ -0.36
HERC4-207ENST00000460168 NBPF10Q6P3W6 841 aaKnown RBP12.8□□□□□ -0.36
HERC4-207ENST00000460168 TMED8Q6PL24 325 aaPredicted RBP12.8□□□□□ -0.36
HERC4-207ENST00000460168 CHD1LQ86WJ1 897 aa12.8□□□□□ -0.36
HERC4-207ENST00000460168 DNAJC10Q8IXB1 793 aa12.8□□□□□ -0.36
HERC4-207ENST00000460168 NBPF15Q8N660 670 aa12.8□□□□□ -0.36
HERC4-207ENST00000460168 LNPKQ9C0E8 428 aa12.8□□□□□ -0.36
HERC4-207ENST00000460168 PDE4AP27815 886 aa12.8□□□□□ -0.36
HERC4-207ENST00000460168 ZBTB47Q9UFB7 747 aaPredicted RBP12.8□□□□□ -0.36
HERC4-207ENST00000460168 SMAP1Q8IYB5 467 aaPredicted RBP12.79□□□□□ -0.36
HERC4-207ENST00000460168 GJD4Q96KN9 370 aaPredicted RBP12.79□□□□□ -0.36
HERC4-207ENST00000460168 METTL22Q9BUU2 404 aaPredicted RBP12.79□□□□□ -0.36
HERC4-207ENST00000460168 DCTPP1Q9H773 170 aa12.79□□□□□ -0.36
HERC4-207ENST00000460168 ZNF330Q9Y3S2 320 aaPredicted RBP12.79□□□□□ -0.36
HERC4-207ENST00000460168 GSE1Q14687 1217 aa12.78□□□□□ -0.36
HERC4-207ENST00000460168 MYD88Q99836 296 aa12.78□□□□□ -0.36
HERC4-207ENST00000460168 PLBD2Q8NHP8 589 aa12.78□□□□□ -0.36
HERC4-207ENST00000460168 TRPC5Q9UL62 973 aaPredicted RBP12.78□□□□□ -0.36
HERC4-207ENST00000460168 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.36
HERC4-207ENST00000460168 BACH2Q9BYV9 841 aa12.77□□□□□ -0.36
HERC4-207ENST00000460168 HDAC5Q9UQL6 1122 aa12.77□□□□□ -0.36
HERC4-207ENST00000460168 ARFGEF2Q9Y6D5 1785 aa12.77□□□□□ -0.36
HERC4-207ENST00000460168 PNMA6EA0A0J9YXQ4 647 aa12.77□□□□□ -0.37
HERC4-207ENST00000460168 GRM8O00222 908 aa12.77□□□□□ -0.37
HERC4-207ENST00000460168 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
HERC4-207ENST00000460168 IGKV5-2P06315 115 aa12.77□□□□□ -0.37
HERC4-207ENST00000460168 ATP8B2P98198 1209 aa12.77□□□□□ -0.37
HERC4-207ENST00000460168 FAM161AQ3B820 660 aa12.77□□□□□ -0.37
HERC4-207ENST00000460168 ZNF622Q969S3 477 aaKnown RBP eCLIP12.77□□□□□ -0.37
HERC4-207ENST00000460168 IPO9Q96P70 1041 aaKnown RBP12.77□□□□□ -0.37
HERC4-207ENST00000460168 SLC4A9Q96Q91 983 aa12.77□□□□□ -0.37
HERC4-207ENST00000460168 THSD7AQ9UPZ6 1657 aa12.76□□□□□ -0.37
HERC4-207ENST00000460168 NEURL1BA8MQ27 555 aa12.76□□□□□ -0.37
HERC4-207ENST00000460168 APBB1O00213 710 aa12.76□□□□□ -0.37
HERC4-207ENST00000460168 KCNQ2O43526 872 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms